Wall clock time and date at job start Sat Mar 6 2021 21:30:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36775 * 125.79955 * 2 1 4 4 C 1.47266 * 126.94075 * 0.03928 * 3 2 1 5 5 O 1.21626 * 119.99865 * 0.02562 * 4 3 2 6 6 N 1.34775 * 119.99935 * 179.97438 * 4 3 2 7 7 C 1.46495 * 119.99982 * 180.02562 * 6 4 3 8 8 C 1.53006 * 109.47241 * 174.93371 * 7 6 4 9 9 C 1.50694 * 112.84573 * 296.28350 * 8 7 6 10 10 C 1.38242 * 119.99716 * 113.65153 * 9 8 7 11 11 C 1.38232 * 119.99532 * 179.76489 * 10 9 8 12 12 C 1.38232 * 120.00294 * 0.50402 * 11 10 9 13 13 C 1.38240 * 119.99924 * 359.74851 * 12 11 10 14 14 C 1.38230 * 119.99832 * 359.97438 * 13 12 11 15 15 C 1.53779 * 113.61459 * 165.08700 * 8 7 6 16 16 C 1.54051 * 86.98663 * 270.83870 * 15 8 7 17 17 H 1.09006 * 113.61215 * 89.11608 * 16 15 8 18 18 F 1.39898 * 113.69814 * 220.01351 * 16 15 8 19 19 C 1.53778 * 113.61186 * 67.47881 * 8 7 6 20 20 C 1.46688 * 106.11271 * 180.02562 * 3 2 1 21 21 C 1.34473 * 106.33742 * 0.02562 * 20 3 2 22 22 C 1.50704 * 125.57583 * 179.97438 * 21 20 3 23 23 O 1.42901 * 109.47405 * 120.02287 * 22 21 20 24 24 Si 1.86305 * 109.46750 * 0.02562 * 22 21 20 25 25 N 1.34659 * 125.80506 * 180.29274 * 2 1 3 26 26 H 1.09003 * 109.46969 * 90.00312 * 1 2 3 27 27 H 1.09001 * 109.46616 * 209.99888 * 1 2 3 28 28 H 1.08991 * 109.47218 * 329.99710 * 1 2 3 29 29 H 0.97001 * 119.99618 * 359.97438 * 6 4 3 30 30 H 1.09000 * 109.47022 * 294.93074 * 7 6 4 31 31 H 1.08995 * 109.47518 * 54.92971 * 7 6 4 32 32 H 1.08002 * 120.00021 * 359.97438 * 10 9 8 33 33 H 1.08004 * 119.99871 * 180.22712 * 11 10 9 34 34 H 1.08001 * 120.00215 * 179.72865 * 12 11 10 35 35 H 1.07999 * 119.99967 * 179.97438 * 13 12 11 36 36 H 1.07999 * 119.99622 * 179.97438 * 14 13 12 37 37 H 1.08997 * 113.61464 * 25.43236 * 15 8 7 38 38 H 1.08998 * 113.61488 * 156.33219 * 15 8 7 39 39 H 1.09000 * 113.61123 * 203.66632 * 19 8 7 40 40 H 1.09000 * 113.61597 * 334.48262 * 19 8 7 41 41 H 1.08009 * 126.82696 * 179.97438 * 20 3 2 42 42 H 1.08995 * 109.46718 * 240.02605 * 22 21 20 43 43 H 0.96700 * 113.99458 * 299.99801 * 23 22 21 44 44 H 1.48501 * 109.99787 * 180.02562 * 24 22 21 45 45 H 1.48503 * 110.00138 * 301.32399 * 24 22 21 46 46 H 0.97002 * 124.85379 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8701 2.5157 0.0008 5 8 0.6838 2.7839 0.0020 6 7 2.7848 3.5055 0.0012 7 6 2.3502 4.9045 0.0026 8 6 3.5711 5.8178 0.1302 9 6 4.3005 5.6403 1.4368 10 6 5.5806 5.1185 1.4484 11 6 6.2516 4.9602 2.6465 12 6 5.6386 5.3139 3.8340 13 6 4.3566 5.8308 3.8228 14 6 3.6878 5.9945 2.6242 15 6 3.2804 7.2871 -0.2184 16 6 3.6352 6.9272 -1.6737 17 1 2.7829 6.5799 -2.2578 18 9 4.3790 7.9128 -2.3313 19 6 4.4939 5.7879 -1.0996 20 6 3.6882 0.6152 -0.0006 21 6 3.6096 -0.7272 -0.0015 22 6 4.7820 -1.6741 -0.0030 23 8 4.7299 -2.4987 1.1630 24 14 6.3687 -0.6977 -0.0025 25 7 2.2948 -1.0921 -0.0056 26 1 -0.3633 -0.0001 -1.0277 27 1 -0.3632 -0.8900 0.5138 28 1 -0.3633 0.8899 0.5138 29 1 3.7309 3.2915 0.0014 30 1 1.8282 5.1237 -0.9289 31 1 1.6789 5.0756 0.8441 32 1 6.0577 4.8376 0.5210 33 1 7.2531 4.5559 2.6553 34 1 6.1612 5.1861 4.7705 35 1 3.8775 6.1068 4.7506 36 1 2.6860 6.3979 2.6156 37 1 2.2373 7.5707 -0.0792 38 1 3.9760 7.9903 0.2394 39 1 5.5207 6.0820 -0.8822 40 1 4.4308 4.8615 -1.6704 41 1 4.5890 1.2111 -0.0012 42 1 4.7415 -2.3012 -0.8936 43 1 4.7618 -2.0063 1.9946 44 1 7.5326 -1.6200 -0.0046 45 1 6.4207 0.1876 -1.1937 46 1 1.9735 -2.0073 -0.0099 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:48 Heat of formation + Delta-G solvation = -23.093242 kcal Electronic energy + Delta-G solvation = -30548.146561 eV Core-core repulsion = 26319.856806 eV Total energy + Delta-G solvation = -4228.289756 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.55347 -42.47355 -41.46668 -39.89294 -38.65694 -37.72122 -35.26082 -32.89607 -32.28381 -31.85464 -31.76310 -29.22530 -28.36113 -27.06599 -25.59557 -24.85513 -23.23762 -22.93133 -22.42833 -21.46747 -20.82579 -19.63020 -19.06625 -18.33676 -17.45663 -17.28044 -16.94063 -16.79510 -16.50531 -16.44925 -16.10519 -15.91234 -15.48477 -15.43924 -15.27648 -15.14381 -14.87601 -14.70884 -14.37756 -14.22194 -14.19595 -14.04684 -13.84379 -13.57655 -13.46540 -13.38103 -13.28203 -12.93787 -12.44407 -12.35386 -12.14171 -12.11086 -12.05913 -11.71680 -11.28213 -11.21237 -10.90957 -10.66840 -10.15803 -9.82685 -9.73456 -9.55873 -9.17210 -4.94535 0.49772 0.58166 0.70642 1.17688 1.27820 1.69960 1.91718 2.11042 2.47336 2.53144 2.91062 3.18599 3.30883 3.47295 3.49688 3.55596 3.61225 3.68910 3.87743 3.91264 4.08834 4.19330 4.19817 4.20966 4.27987 4.37787 4.39642 4.48457 4.55901 4.67048 4.67603 4.69227 4.72559 4.72987 4.76841 4.78472 4.90117 4.96524 5.01281 5.16322 5.18340 5.23297 5.31243 5.48846 5.66469 5.67053 5.72870 5.73081 5.87063 6.18547 6.43816 6.64533 6.67584 7.34347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.110 3.890 3 C -0.258 4.258 4 C 0.589 3.411 5 O -0.586 6.586 6 N -0.710 5.710 7 C 0.150 3.850 8 C -0.042 4.042 9 C -0.071 4.071 10 C -0.122 4.122 11 C -0.121 4.121 12 C -0.131 4.131 13 C -0.131 4.131 14 C -0.123 4.123 15 C -0.137 4.137 16 C 0.055 3.945 17 H 0.122 0.878 18 F -0.224 7.224 19 C -0.148 4.148 20 C -0.158 4.158 21 C -0.013 4.013 22 C -0.055 4.055 23 O -0.558 6.558 24 Si 0.799 3.201 25 N -0.530 5.530 26 H 0.080 0.920 27 H 0.085 0.915 28 H 0.083 0.917 29 H 0.410 0.590 30 H 0.073 0.927 31 H 0.067 0.933 32 H 0.141 0.859 33 H 0.142 0.858 34 H 0.132 0.868 35 H 0.127 0.873 36 H 0.121 0.879 37 H 0.095 0.905 38 H 0.097 0.903 39 H 0.107 0.893 40 H 0.095 0.905 41 H 0.170 0.830 42 H 0.110 0.890 43 H 0.397 0.603 44 H -0.296 1.296 45 H -0.275 1.275 46 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.985 -1.568 2.600 4.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.010 4.010 3 C -0.267 4.267 4 C 0.379 3.621 5 O -0.468 6.468 6 N -0.361 5.361 7 C 0.026 3.974 8 C -0.042 4.042 9 C -0.071 4.071 10 C -0.140 4.140 11 C -0.138 4.138 12 C -0.149 4.149 13 C -0.149 4.149 14 C -0.141 4.141 15 C -0.176 4.176 16 C 0.019 3.981 17 H 0.140 0.860 18 F -0.205 7.205 19 C -0.185 4.185 20 C -0.182 4.182 21 C -0.123 4.123 22 C -0.164 4.164 23 O -0.365 6.365 24 Si 0.702 3.298 25 N -0.126 5.126 26 H 0.099 0.901 27 H 0.103 0.897 28 H 0.102 0.898 29 H 0.246 0.754 30 H 0.091 0.909 31 H 0.085 0.915 32 H 0.159 0.841 33 H 0.159 0.841 34 H 0.150 0.850 35 H 0.145 0.855 36 H 0.139 0.861 37 H 0.113 0.887 38 H 0.115 0.885 39 H 0.125 0.875 40 H 0.113 0.887 41 H 0.187 0.813 42 H 0.127 0.873 43 H 0.247 0.753 44 H -0.224 1.224 45 H -0.201 1.201 46 H 0.266 0.734 Dipole moment (debyes) X Y Z Total from point charges 2.869 -1.767 1.721 3.784 hybrid contribution -0.389 -0.680 -0.292 0.837 sum 2.480 -2.448 1.429 3.766 Atomic orbital electron populations 1.20572 0.86441 1.04436 1.03765 1.20590 0.94256 0.85840 1.00309 1.20084 0.93956 0.91661 1.21048 1.17511 0.84908 0.84797 0.74843 1.90737 1.18077 1.84950 1.53028 1.45511 1.10122 1.05215 1.75294 1.21067 0.94480 0.79406 1.02418 1.20578 0.95123 0.95889 0.92618 1.19449 0.94788 0.99639 0.93184 1.21309 0.94119 0.99467 0.99117 1.21439 1.00756 0.99435 0.92214 1.21443 0.95319 0.98941 0.99220 1.21359 0.95605 0.99600 0.98295 1.21092 1.00168 1.00468 0.92378 1.23663 1.04369 0.95241 0.94284 1.23410 0.95057 0.87124 0.92498 0.86008 1.92783 1.79069 1.65066 1.83546 1.23769 0.99814 0.99569 0.95367 1.21969 0.95938 0.92757 1.07523 1.20960 0.85160 0.94965 1.11248 1.25042 1.03089 0.97040 0.91220 1.86468 1.96941 1.36659 1.16479 0.93210 0.71068 0.78921 0.86583 1.41597 1.05436 1.08930 1.56642 0.90114 0.89660 0.89808 0.75374 0.90859 0.91475 0.84121 0.84052 0.85017 0.85521 0.86111 0.88676 0.88492 0.87511 0.88665 0.81305 0.87280 0.75251 1.22388 1.20071 0.73429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.11 9.88 71.23 0.70 0.60 16 2 C 0.11 0.27 7.17 41.78 0.30 0.57 16 3 C -0.26 -0.95 6.29 -19.04 -0.12 -1.07 16 4 C 0.59 3.69 7.81 86.62 0.68 4.36 16 5 O -0.59 -7.61 14.81 -4.11 -0.06 -7.67 16 6 N -0.71 0.02 5.21 -466.53 -2.43 -2.41 16 7 C 0.15 -0.15 4.83 86.38 0.42 0.27 16 8 C -0.04 0.17 0.62 -52.40 -0.03 0.13 16 9 C -0.07 0.17 4.57 -19.87 -0.09 0.08 16 10 C -0.12 0.48 9.05 22.27 0.20 0.69 16 11 C -0.12 0.43 10.05 22.27 0.22 0.65 16 12 C -0.13 0.24 10.05 22.27 0.22 0.46 16 13 C -0.13 0.05 10.05 22.27 0.22 0.27 16 14 C -0.12 0.04 9.36 22.27 0.21 0.25 16 15 C -0.14 0.45 7.02 31.21 0.22 0.67 16 16 C 0.05 -0.11 5.32 31.21 0.17 0.05 16 17 H 0.12 -0.55 7.60 -2.38 -0.02 -0.57 16 18 F -0.22 -1.06 17.41 44.97 0.78 -0.28 16 19 C -0.15 0.73 6.03 31.12 0.19 0.91 16 20 C -0.16 0.24 9.03 23.62 0.21 0.46 16 21 C -0.01 0.03 6.48 40.98 0.27 0.29 16 22 C -0.05 0.22 3.08 71.24 0.22 0.43 16 23 O -0.56 1.80 12.88 -148.98 -1.92 -0.12 16 24 Si 0.80 -4.66 30.56 68.60 2.10 -2.56 16 25 N -0.53 0.75 5.90 -171.07 -1.01 -0.26 16 26 H 0.08 0.06 8.14 -2.39 -0.02 0.04 16 27 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 28 H 0.08 0.48 6.46 -2.39 -0.02 0.47 16 29 H 0.41 -1.71 7.36 -92.71 -0.68 -2.39 16 30 H 0.07 -0.06 7.30 -2.39 -0.02 -0.08 16 31 H 0.07 0.12 8.00 -2.39 -0.02 0.10 16 32 H 0.14 -1.12 6.44 -2.91 -0.02 -1.14 16 33 H 0.14 -1.08 8.06 -2.91 -0.02 -1.11 16 34 H 0.13 -0.62 8.06 -2.91 -0.02 -0.64 16 35 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 36 H 0.12 -0.16 8.06 -2.91 -0.02 -0.18 16 37 H 0.09 -0.45 8.10 -2.39 -0.02 -0.47 16 38 H 0.10 -0.17 8.09 -2.39 -0.02 -0.19 16 39 H 0.11 -0.55 6.82 -2.39 -0.02 -0.56 16 40 H 0.09 -0.63 7.99 -2.39 -0.02 -0.65 16 41 H 0.17 -1.19 5.86 -2.91 -0.02 -1.21 16 42 H 0.11 -0.34 7.96 -2.39 -0.02 -0.36 16 43 H 0.40 -4.12 8.70 -74.06 -0.64 -4.76 16 44 H -0.30 -0.49 7.11 99.48 0.71 0.22 16 45 H -0.27 0.52 7.11 99.48 0.71 1.23 16 46 H 0.43 -2.19 8.96 -92.71 -0.83 -3.02 16 Total: 0.00 -19.73 381.84 0.59 -19.14 By element: Atomic # 1 Polarization: -14.83 SS G_CDS: -1.08 Total: -15.91 kcal Atomic # 6 Polarization: 5.87 SS G_CDS: 4.21 Total: 10.08 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -3.44 Total: -2.67 kcal Atomic # 8 Polarization: -5.81 SS G_CDS: -1.98 Total: -7.79 kcal Atomic # 9 Polarization: -1.06 SS G_CDS: 0.78 Total: -0.28 kcal Atomic # 14 Polarization: -4.66 SS G_CDS: 2.10 Total: -2.56 kcal Total: -19.73 0.59 -19.14 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.958 kcal (2) G-P(sol) polarization free energy of solvation -19.725 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.683 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.136 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds