Wall clock time and date at job start Sat Mar 6 2021 20:06:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.37813 * 119.93685 * 14.72693 * 4 2 1 6 6 C 1.39675 * 119.87721 * 179.73421 * 5 4 2 7 7 C 1.47728 * 120.12029 * 180.27129 * 6 5 4 8 8 O 1.21564 * 119.99638 * 0.26717 * 7 6 5 9 9 N 1.34773 * 120.00141 * 180.26905 * 7 6 5 10 10 C 1.46495 * 120.00105 * 179.97438 * 9 7 6 11 11 H 1.08998 * 109.47213 * 325.00922 * 10 9 7 12 12 C 1.53007 * 109.46759 * 85.00156 * 10 9 7 13 13 C 1.53006 * 109.47066 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.46826 * 299.99968 * 13 12 10 15 15 H 1.08996 * 109.47169 * 299.99858 * 14 13 12 16 16 C 1.53006 * 109.46826 * 179.97438 * 14 13 12 17 17 C 1.52995 * 109.47132 * 64.99905 * 16 14 13 18 18 O 1.42898 * 109.47217 * 179.97438 * 17 16 14 19 19 C 1.52998 * 109.47361 * 60.00577 * 14 13 12 20 20 C 1.52996 * 109.47582 * 204.99968 * 10 9 7 21 21 C 1.39629 * 119.76480 * 0.53723 * 6 5 4 22 22 C 1.37860 * 119.87765 * 359.73581 * 21 6 5 23 23 C 1.38633 * 120.11804 * 359.97438 * 22 21 6 24 24 F 1.35106 * 119.88028 * 180.02562 * 23 22 21 25 25 H 0.96708 * 114.00101 * 299.99304 * 1 2 3 26 26 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 27 27 H 1.48493 * 110.00101 * 300.00094 * 3 2 1 28 28 H 1.48502 * 109.99925 * 61.32089 * 3 2 1 29 29 H 1.07997 * 120.06268 * 359.97438 * 5 4 2 30 30 H 0.96998 * 120.00279 * 0.02562 * 9 7 6 31 31 H 1.09000 * 109.47220 * 299.99992 * 12 10 9 32 32 H 1.08996 * 109.47269 * 60.00037 * 12 10 9 33 33 H 1.08998 * 109.47042 * 179.97438 * 13 12 10 34 34 H 1.08996 * 109.47131 * 59.99849 * 13 12 10 35 35 H 1.08998 * 109.47025 * 185.00298 * 16 14 13 36 36 H 1.08996 * 109.47055 * 305.00137 * 16 14 13 37 37 H 1.08998 * 109.47486 * 300.00110 * 17 16 14 38 38 H 1.09009 * 109.46999 * 59.99825 * 17 16 14 39 39 H 0.96711 * 114.00058 * 179.97438 * 18 17 16 40 40 H 1.09000 * 109.47309 * 179.97438 * 19 14 13 41 41 H 1.08999 * 109.47838 * 59.99088 * 19 14 13 42 42 H 1.09004 * 109.47184 * 300.00584 * 20 10 9 43 43 H 1.08998 * 109.47096 * 60.00209 * 20 10 9 44 44 H 1.08002 * 120.06643 * 179.71386 * 21 6 5 45 45 H 1.08001 * 119.94436 * 179.97438 * 22 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.0717 -1.4901 1.9736 6 6 1.5400 -2.1525 3.1107 7 6 0.6246 -2.9944 3.9079 8 8 -0.5373 -3.1156 3.5719 9 7 1.0777 -3.6281 5.0077 10 6 0.1698 -4.4626 5.7985 11 1 -0.8270 -4.0217 5.7924 12 6 0.1102 -5.8665 5.1932 13 6 -0.8386 -6.7380 6.0188 14 6 -0.3284 -6.8246 7.4586 15 1 0.6683 -7.2657 7.4650 16 6 -1.2775 -7.6955 8.2844 17 6 -1.2427 -9.1307 7.7556 18 8 -2.1286 -9.9442 8.5271 19 6 -0.2688 -5.4207 8.0640 20 6 0.6805 -4.5492 7.2382 21 6 2.8752 -2.0115 3.4944 22 6 3.7251 -1.2246 2.7468 23 6 3.2565 -0.5742 1.6158 24 9 4.0938 0.1954 0.8864 25 1 -0.3934 0.4416 0.7652 26 1 1.7923 -0.5138 -0.8900 27 1 1.5614 2.4679 -1.2084 28 1 1.5878 2.4585 1.2243 29 1 0.0388 -1.5919 1.6752 30 1 2.0048 -3.5311 5.2760 31 1 -0.2537 -5.8049 4.1676 32 1 1.1069 -6.3075 5.1992 33 1 -0.8814 -7.7380 5.5873 34 1 -1.8352 -6.2969 6.0124 35 1 -0.9643 -7.6852 9.3283 36 1 -2.2915 -7.3037 8.2053 37 1 -1.5559 -9.1410 6.7116 38 1 -0.2286 -9.5226 7.8345 39 1 -2.1578 -10.8693 8.2467 40 1 0.0942 -5.4825 9.0899 41 1 -1.2655 -4.9795 8.0575 42 1 1.6773 -4.9901 7.2442 43 1 0.7230 -3.5491 7.6694 44 1 3.2413 -2.5178 4.3753 45 1 4.7579 -1.1145 3.0429 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13461142_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:06:52 Heat of formation + Delta-G solvation = -153.466904 kcal Electronic energy + Delta-G solvation = -27290.968862 eV Core-core repulsion = 23188.447821 eV Total energy + Delta-G solvation = -4102.521042 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.27830 -41.58996 -40.29360 -39.36259 -37.87796 -37.72758 -35.81775 -33.37711 -32.44375 -31.86035 -31.66989 -28.59570 -27.10332 -25.26068 -24.19680 -23.46065 -23.23170 -21.78515 -21.50142 -20.80977 -19.35575 -18.58656 -18.36293 -18.08295 -17.83967 -17.04970 -16.98324 -16.54991 -16.23167 -16.03968 -15.85238 -15.61391 -15.30622 -15.15424 -15.03859 -14.90828 -14.62974 -14.35595 -14.23826 -13.97394 -13.65773 -13.50669 -13.36750 -13.15064 -12.91577 -12.85039 -12.48544 -12.19192 -12.11212 -12.00317 -11.93769 -11.74065 -11.35370 -11.21742 -11.13176 -10.97247 -10.81888 -10.21867 -10.02654 -9.74246 -4.85953 -0.50263 0.01225 1.15404 1.49161 1.60653 1.85051 2.00323 2.58168 2.94796 3.14327 3.27072 3.31492 3.56729 3.63890 3.67573 3.72655 3.94542 3.97109 4.03089 4.11035 4.17839 4.26842 4.34823 4.39703 4.41424 4.51310 4.55163 4.56401 4.59189 4.61441 4.76877 4.79477 4.89277 4.92300 5.00067 5.03846 5.07663 5.09219 5.15092 5.17072 5.19678 5.23369 5.38251 5.42758 5.53910 5.62207 6.30627 6.44016 6.85736 7.10762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.080 4.080 3 Si 0.747 3.253 4 C -0.163 4.163 5 C -0.041 4.041 6 C -0.154 4.154 7 C 0.557 3.443 8 O -0.580 6.580 9 N -0.706 5.706 10 C 0.145 3.855 11 H 0.062 0.938 12 C -0.123 4.123 13 C -0.113 4.113 14 C -0.077 4.077 15 H 0.088 0.912 16 C -0.116 4.116 17 C 0.069 3.931 18 O -0.602 6.602 19 C -0.111 4.111 20 C -0.117 4.117 21 C -0.046 4.046 22 C -0.141 4.141 23 C 0.119 3.881 24 F -0.100 7.100 25 H 0.387 0.613 26 H 0.134 0.866 27 H -0.290 1.290 28 H -0.285 1.285 29 H 0.132 0.868 30 H 0.416 0.584 31 H 0.042 0.958 32 H 0.081 0.919 33 H 0.071 0.929 34 H 0.052 0.948 35 H 0.068 0.932 36 H 0.056 0.944 37 H 0.052 0.948 38 H 0.057 0.943 39 H 0.396 0.604 40 H 0.081 0.919 41 H 0.056 0.944 42 H 0.091 0.909 43 H 0.077 0.923 44 H 0.175 0.825 45 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.892 -1.967 3.990 9.942 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.189 4.189 3 Si 0.650 3.350 4 C -0.165 4.165 5 C -0.060 4.060 6 C -0.157 4.157 7 C 0.345 3.655 8 O -0.461 6.461 9 N -0.357 5.357 10 C 0.041 3.959 11 H 0.080 0.920 12 C -0.162 4.162 13 C -0.151 4.151 14 C -0.095 4.095 15 H 0.106 0.894 16 C -0.154 4.154 17 C -0.009 4.009 18 O -0.411 6.411 19 C -0.149 4.149 20 C -0.155 4.155 21 C -0.065 4.065 22 C -0.159 4.159 23 C 0.099 3.901 24 F -0.079 7.079 25 H 0.236 0.764 26 H 0.151 0.849 27 H -0.218 1.218 28 H -0.211 1.211 29 H 0.150 0.850 30 H 0.255 0.745 31 H 0.061 0.939 32 H 0.100 0.900 33 H 0.089 0.911 34 H 0.070 0.930 35 H 0.086 0.914 36 H 0.074 0.926 37 H 0.070 0.930 38 H 0.075 0.925 39 H 0.246 0.754 40 H 0.099 0.901 41 H 0.075 0.925 42 H 0.110 0.890 43 H 0.096 0.904 44 H 0.193 0.807 45 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges 7.887 -0.955 3.516 8.688 hybrid contribution -1.142 -0.495 -0.184 1.259 sum 6.745 -1.450 3.332 7.661 Atomic orbital electron populations 1.86573 1.18007 1.80471 1.50289 1.25086 0.83935 1.11579 0.98282 0.94116 0.91516 0.71846 0.77503 1.20305 0.93604 1.02535 1.00016 1.20871 1.00366 0.92463 0.92305 1.19982 0.95421 1.02313 0.97999 1.18441 0.86883 0.79208 0.80927 1.90796 1.19883 1.64793 1.70586 1.45861 1.15159 1.48460 1.26249 1.21035 0.93609 0.90138 0.91156 0.91966 1.21853 1.00998 0.94830 0.98511 1.21608 0.98548 0.99886 0.95081 1.21075 0.99468 0.95384 0.93575 0.89376 1.21558 1.00166 0.93425 1.00229 1.22375 0.92981 0.91236 0.94260 1.86431 1.67318 1.25979 1.61345 1.21532 0.99719 0.94054 0.99589 1.21768 1.00555 1.01352 0.91791 1.21540 0.90266 0.95330 0.99320 1.21471 1.03233 0.97692 0.93521 1.17804 0.86771 0.93415 0.92122 1.91201 1.69430 1.71189 1.76033 0.76384 0.84900 1.21755 1.21099 0.84971 0.74497 0.93919 0.90000 0.91059 0.92965 0.91377 0.92564 0.92979 0.92470 0.75432 0.90069 0.92518 0.89038 0.90422 0.80749 0.80108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.78 11.64 -148.98 -1.73 -4.51 16 2 C -0.08 -0.14 2.96 71.24 0.21 0.08 16 3 Si 0.75 0.96 29.58 68.60 2.03 2.99 16 4 C -0.16 -0.15 5.13 -19.86 -0.10 -0.25 16 5 C -0.04 -0.14 8.78 22.52 0.20 0.06 16 6 C -0.15 -0.06 5.87 -20.09 -0.12 -0.18 16 7 C 0.56 2.34 7.73 86.75 0.67 3.01 16 8 O -0.58 -8.06 16.01 -3.92 -0.06 -8.13 16 9 N -0.71 2.23 5.03 -445.53 -2.24 -0.01 16 10 C 0.14 -0.24 2.45 44.99 0.11 -0.13 16 11 H 0.06 0.29 7.58 -2.39 -0.02 0.27 16 12 C -0.12 0.14 5.49 30.60 0.17 0.31 16 13 C -0.11 0.20 4.96 30.60 0.15 0.36 16 14 C -0.08 0.33 2.19 -10.79 -0.02 0.31 16 15 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 16 C -0.12 0.11 5.05 30.59 0.15 0.27 16 17 C 0.07 -0.08 6.80 71.98 0.49 0.41 16 18 O -0.60 -1.52 13.66 -148.98 -2.03 -3.56 16 19 C -0.11 0.56 5.20 30.61 0.16 0.72 16 20 C -0.12 0.81 5.39 30.61 0.17 0.98 16 21 C -0.05 0.34 9.54 22.52 0.21 0.55 16 22 C -0.14 1.05 10.01 22.27 0.22 1.27 16 23 C 0.12 -0.34 6.67 22.47 0.15 -0.19 16 24 F -0.10 0.39 13.71 44.97 0.62 1.01 16 25 H 0.39 -0.01 8.42 -74.05 -0.62 -0.64 16 26 H 0.13 -0.01 7.96 -2.39 -0.02 -0.03 16 27 H -0.29 -2.30 7.11 99.48 0.71 -1.59 16 28 H -0.28 -1.67 7.11 99.48 0.71 -0.97 16 29 H 0.13 0.94 6.65 -2.91 -0.02 0.92 16 30 H 0.42 -4.47 6.63 -92.71 -0.61 -5.08 16 31 H 0.04 0.20 8.14 -2.39 -0.02 0.18 16 32 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 33 H 0.07 -0.17 6.57 -2.39 -0.02 -0.19 16 34 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 35 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 36 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 37 H 0.05 -0.12 6.57 -2.39 -0.02 -0.14 16 38 H 0.06 -0.22 8.14 -2.38 -0.02 -0.24 16 39 H 0.40 -2.38 9.12 -74.05 -0.68 -3.06 16 40 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 41 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 42 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 43 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 44 H 0.18 -2.67 6.40 -2.91 -0.02 -2.69 16 45 H 0.18 -2.47 8.06 -2.91 -0.02 -2.49 16 Total: 0.00 -22.06 361.58 -1.45 -23.51 By element: Atomic # 1 Polarization: -18.03 SS G_CDS: -0.84 Total: -18.88 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: 2.82 Total: 7.57 kcal Atomic # 7 Polarization: 2.23 SS G_CDS: -2.24 Total: -0.01 kcal Atomic # 8 Polarization: -12.37 SS G_CDS: -3.83 Total: -16.20 kcal Atomic # 9 Polarization: 0.39 SS G_CDS: 0.62 Total: 1.01 kcal Atomic # 14 Polarization: 0.96 SS G_CDS: 2.03 Total: 2.99 kcal Total: -22.06 -1.45 -23.51 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.958 kcal (2) G-P(sol) polarization free energy of solvation -22.062 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.020 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.447 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.509 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds