Wall clock time and date at job start Sat Mar 6 2021 20:07:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86306 * 109.46882 * 2 1 4 4 C 1.50698 * 109.47346 * 240.00170 * 2 1 3 5 5 C 1.38307 * 120.35020 * 119.97795 * 4 2 1 6 6 N 1.31952 * 121.08265 * 180.02562 * 5 4 2 7 7 C 1.31673 * 121.87504 * 359.76704 * 6 5 4 8 8 C 1.39557 * 120.56929 * 0.49679 * 7 6 5 9 9 C 1.47837 * 120.56191 * 179.77524 * 8 7 6 10 10 O 1.21554 * 120.00265 * 179.72020 * 9 8 7 11 11 N 1.34781 * 120.00012 * 359.71586 * 9 8 7 12 12 C 1.46499 * 119.99874 * 180.02562 * 11 9 8 13 13 H 1.09002 * 109.47391 * 325.00213 * 12 11 9 14 14 C 1.53000 * 109.46840 * 85.00543 * 12 11 9 15 15 C 1.53001 * 109.46886 * 180.02562 * 14 12 11 16 16 C 1.53002 * 109.46963 * 299.99499 * 15 14 12 17 17 H 1.09002 * 109.47067 * 300.00341 * 16 15 14 18 18 C 1.53002 * 109.47454 * 180.02562 * 16 15 14 19 19 C 1.52998 * 109.46926 * 64.99990 * 18 16 15 20 20 O 1.42895 * 109.47287 * 180.02562 * 19 18 16 21 21 C 1.52997 * 109.47092 * 60.00194 * 16 15 14 22 22 C 1.53002 * 109.46799 * 205.00309 * 12 11 9 23 23 C 1.38400 * 120.34295 * 299.99601 * 4 2 1 24 24 H 0.96699 * 114.00322 * 300.00106 * 1 2 3 25 25 H 1.08999 * 109.46988 * 119.99509 * 2 1 3 26 26 H 1.48501 * 109.99652 * 178.68062 * 3 2 1 27 27 H 1.48499 * 109.99799 * 299.99518 * 3 2 1 28 28 H 1.08000 * 119.46187 * 0.02562 * 5 4 2 29 29 H 1.08003 * 119.71288 * 180.26975 * 7 6 5 30 30 H 0.97002 * 119.99716 * 0.02562 * 11 9 8 31 31 H 1.09001 * 109.47194 * 299.99493 * 14 12 11 32 32 H 1.08992 * 109.47399 * 59.99666 * 14 12 11 33 33 H 1.09000 * 109.47437 * 180.02562 * 15 14 12 34 34 H 1.09002 * 109.47508 * 59.99571 * 15 14 12 35 35 H 1.08998 * 109.47254 * 185.00083 * 18 16 15 36 36 H 1.09000 * 109.46519 * 305.00454 * 18 16 15 37 37 H 1.08998 * 109.47230 * 300.00107 * 19 18 16 38 38 H 1.09000 * 109.47396 * 60.00358 * 19 18 16 39 39 H 0.96698 * 114.00480 * 179.97438 * 20 19 18 40 40 H 1.09001 * 109.47375 * 180.02562 * 21 16 15 41 41 H 1.09002 * 109.47497 * 59.99850 * 21 16 15 42 42 H 1.09002 * 109.47075 * 299.99543 * 22 12 11 43 43 H 1.08996 * 109.47407 * 60.00500 * 22 12 11 44 44 H 1.07999 * 120.85740 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7266 -0.0450 -2.1458 6 7 3.1740 -0.6527 -3.2282 7 6 2.8913 -1.9128 -3.4852 8 6 2.0903 -2.6525 -2.6140 9 6 1.7689 -4.0658 -2.9053 10 8 1.0744 -4.7020 -2.1369 11 7 2.2460 -4.6489 -4.0228 12 6 1.9270 -6.0493 -4.3117 13 1 1.8795 -6.6110 -3.3788 14 6 0.5752 -6.1280 -5.0240 15 6 0.2419 -7.5905 -5.3250 16 6 1.3273 -8.1864 -6.2238 17 1 1.3750 -7.6250 -7.1569 18 6 0.9937 -9.6488 -6.5255 19 6 -0.2953 -9.7189 -7.3467 20 8 -0.6073 -11.0847 -7.6280 21 6 2.6791 -8.1077 -5.5116 22 6 3.0126 -6.6446 -5.2106 23 6 1.6015 -2.0353 -1.4565 24 1 -0.3934 0.4417 0.7650 25 1 1.7923 -0.5138 0.8900 26 1 3.5346 1.7703 0.0321 27 1 1.5615 2.4679 -1.2086 28 1 2.9857 0.9889 -1.9718 29 1 3.2798 -2.3769 -4.3797 30 1 2.8005 -4.1413 -4.6359 31 1 -0.1981 -5.7039 -4.3835 32 1 0.6228 -5.5663 -5.9568 33 1 -0.7210 -7.6467 -5.8329 34 1 0.1942 -8.1519 -4.3919 35 1 1.8097 -10.0985 -7.0911 36 1 0.8582 -10.1910 -5.5896 37 1 -1.1114 -9.2692 -6.7811 38 1 -0.1599 -9.1767 -8.2825 39 1 -1.4146 -11.2051 -8.1465 40 1 3.4525 -8.5318 -6.1520 41 1 2.6315 -8.6690 -4.5784 42 1 3.0601 -6.0829 -6.1436 43 1 3.9757 -6.5885 -4.7032 44 1 0.9816 -2.5786 -0.7587 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13461142_13287814.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:07:55 Heat of formation + Delta-G solvation = -98.667855 kcal Electronic energy + Delta-G solvation = -24981.610342 eV Core-core repulsion = 21285.493630 eV Total energy + Delta-G solvation = -3696.116712 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.162 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.07670 -40.85367 -39.56743 -37.87963 -37.79628 -35.89235 -33.98009 -33.77445 -32.36903 -31.80501 -28.68170 -27.35068 -25.95712 -24.31540 -23.92653 -23.44643 -21.81780 -21.63490 -20.83315 -19.12405 -18.60784 -18.36147 -18.22923 -18.03816 -16.97730 -16.61558 -16.25756 -16.20198 -15.70081 -15.43692 -15.30735 -15.06863 -14.97633 -14.86632 -14.56158 -14.46256 -14.30655 -13.83688 -13.72100 -13.48415 -13.17008 -12.93511 -12.67321 -12.21767 -12.18293 -12.13554 -11.98850 -11.82331 -11.47573 -11.29881 -11.20696 -11.17219 -10.85190 -10.82481 -10.63350 -10.25097 -10.14193 -4.98037 -0.74690 -0.16240 1.21395 1.52961 1.63339 1.85555 1.91701 2.47182 2.91107 3.16212 3.25735 3.38767 3.55370 3.57599 3.61267 3.68912 3.70125 3.91305 3.98935 4.01139 4.12998 4.15992 4.25377 4.32614 4.38765 4.42556 4.49014 4.53597 4.54484 4.58707 4.69685 4.74308 4.77052 4.91273 5.00582 5.05772 5.12958 5.13728 5.15136 5.17539 5.20863 5.34659 5.38409 5.51882 6.29581 6.45580 6.83671 6.85024 6.96489 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.081 4.081 3 Si 0.782 3.218 4 C -0.141 4.141 5 C 0.108 3.892 6 N -0.495 5.495 7 C 0.143 3.857 8 C -0.192 4.192 9 C 0.566 3.434 10 O -0.570 6.570 11 N -0.705 5.705 12 C 0.145 3.855 13 H 0.068 0.932 14 C -0.124 4.124 15 C -0.112 4.112 16 C -0.078 4.078 17 H 0.086 0.914 18 C -0.116 4.116 19 C 0.069 3.931 20 O -0.602 6.602 21 C -0.110 4.110 22 C -0.118 4.118 23 C 0.001 3.999 24 H 0.408 0.592 25 H 0.101 0.899 26 H -0.278 1.278 27 H -0.290 1.290 28 H 0.158 0.842 29 H 0.198 0.802 30 H 0.415 0.585 31 H 0.044 0.956 32 H 0.079 0.921 33 H 0.071 0.929 34 H 0.055 0.945 35 H 0.067 0.933 36 H 0.057 0.943 37 H 0.053 0.947 38 H 0.056 0.944 39 H 0.396 0.604 40 H 0.081 0.919 41 H 0.059 0.941 42 H 0.089 0.911 43 H 0.078 0.922 44 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.090 2.980 -0.290 3.186 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.191 4.191 3 Si 0.686 3.314 4 C -0.143 4.143 5 C -0.047 4.047 6 N -0.203 5.203 7 C -0.015 4.015 8 C -0.197 4.197 9 C 0.353 3.647 10 O -0.450 6.450 11 N -0.356 5.356 12 C 0.041 3.959 13 H 0.086 0.914 14 C -0.163 4.163 15 C -0.150 4.150 16 C -0.096 4.096 17 H 0.104 0.896 18 C -0.153 4.153 19 C -0.009 4.009 20 O -0.410 6.410 21 C -0.148 4.148 22 C -0.156 4.156 23 C -0.025 4.025 24 H 0.260 0.740 25 H 0.119 0.881 26 H -0.205 1.205 27 H -0.218 1.218 28 H 0.175 0.825 29 H 0.214 0.786 30 H 0.253 0.747 31 H 0.063 0.937 32 H 0.098 0.902 33 H 0.090 0.910 34 H 0.074 0.926 35 H 0.086 0.914 36 H 0.076 0.924 37 H 0.071 0.929 38 H 0.074 0.926 39 H 0.246 0.754 40 H 0.099 0.901 41 H 0.078 0.922 42 H 0.107 0.893 43 H 0.096 0.904 44 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 2.240 3.163 -0.971 3.996 hybrid contribution -0.973 -0.731 -0.009 1.217 sum 1.267 2.433 -0.981 2.913 Atomic orbital electron populations 1.86435 1.16880 1.82624 1.51633 1.24857 0.86285 1.11805 0.96133 0.93858 0.77672 0.74593 0.85305 1.20717 1.00092 0.94899 0.98576 1.22874 0.93046 0.99646 0.89150 1.67736 1.22346 1.11144 1.19073 1.23502 0.91084 0.88907 0.98030 1.21102 1.04178 0.95560 0.98887 1.18095 0.79257 0.85887 0.81458 1.90794 1.39485 1.65306 1.49371 1.45894 1.52738 1.13731 1.23265 1.21093 0.95495 0.80405 0.98884 0.91408 1.21862 0.96206 0.97596 1.00639 1.21605 0.99057 0.94602 0.99762 1.21082 0.94810 0.94467 0.99243 0.89578 1.21550 0.96926 0.96892 0.99953 1.22371 0.97399 0.82276 0.98807 1.86426 1.49674 1.27268 1.77662 1.21526 0.96775 0.95633 1.00861 1.21784 0.97350 0.96498 0.99986 1.21700 0.92708 0.93336 0.94804 0.74040 0.88149 1.20509 1.21755 0.82496 0.78579 0.74684 0.93735 0.90233 0.91000 0.92643 0.91407 0.92381 0.92922 0.92590 0.75430 0.90089 0.92232 0.89266 0.90383 0.83606 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.41 12.75 -148.98 -1.90 -1.49 16 2 C -0.08 0.13 2.82 71.24 0.20 0.33 16 3 Si 0.78 -3.27 29.82 68.60 2.05 -1.22 16 4 C -0.14 -0.64 5.42 -19.81 -0.11 -0.74 16 5 C 0.11 0.59 9.84 84.69 0.83 1.43 16 6 N -0.50 -2.87 10.35 -194.76 -2.01 -4.89 16 7 C 0.14 0.20 10.71 85.03 0.91 1.11 16 8 C -0.19 -0.89 5.89 -19.99 -0.12 -1.01 16 9 C 0.57 3.42 7.75 86.78 0.67 4.09 16 10 O -0.57 -8.15 16.08 -3.89 -0.06 -8.21 16 11 N -0.70 0.84 5.03 -445.40 -2.24 -1.40 16 12 C 0.15 -0.10 2.45 44.99 0.11 0.01 16 13 H 0.07 0.32 7.58 -2.39 -0.02 0.30 16 14 C -0.12 0.04 5.49 30.59 0.17 0.20 16 15 C -0.11 0.16 4.96 30.60 0.15 0.31 16 16 C -0.08 0.29 2.19 -10.79 -0.02 0.26 16 17 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 18 C -0.12 0.07 5.05 30.59 0.15 0.23 16 19 C 0.07 -0.05 6.80 71.98 0.49 0.44 16 20 O -0.60 -1.70 13.66 -148.98 -2.03 -3.73 16 21 C -0.11 0.48 5.21 30.61 0.16 0.64 16 22 C -0.12 0.68 5.40 30.61 0.17 0.84 16 23 C 0.00 0.01 9.31 22.73 0.21 0.22 16 24 H 0.41 -4.71 8.74 -74.06 -0.65 -5.36 16 25 H 0.10 -0.56 7.96 -2.39 -0.02 -0.58 16 26 H -0.28 -0.12 7.11 99.48 0.71 0.59 16 27 H -0.29 -0.89 7.11 99.48 0.71 -0.18 16 28 H 0.16 0.54 4.88 -2.91 -0.01 0.52 16 29 H 0.20 -1.40 6.42 -2.91 -0.02 -1.41 16 30 H 0.41 -3.24 6.67 -92.71 -0.62 -3.85 16 31 H 0.04 0.23 8.14 -2.39 -0.02 0.21 16 32 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 33 H 0.07 -0.15 6.56 -2.39 -0.02 -0.17 16 34 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 35 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 36 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 37 H 0.05 -0.11 6.56 -2.39 -0.02 -0.12 16 38 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 39 H 0.40 -2.26 9.12 -74.06 -0.68 -2.94 16 40 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 41 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 42 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 43 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 44 H 0.15 1.09 7.74 -2.91 -0.02 1.06 16 Total: 0.00 -24.14 353.00 -3.09 -27.23 By element: Atomic # 1 Polarization: -13.80 SS G_CDS: -0.86 Total: -14.66 kcal Atomic # 6 Polarization: 4.39 SS G_CDS: 3.98 Total: 8.37 kcal Atomic # 7 Polarization: -2.03 SS G_CDS: -4.26 Total: -6.29 kcal Atomic # 8 Polarization: -9.43 SS G_CDS: -4.00 Total: -13.43 kcal Atomic # 14 Polarization: -3.27 SS G_CDS: 2.05 Total: -1.22 kcal Total: -24.14 -3.09 -27.23 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_13287814.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.440 kcal (2) G-P(sol) polarization free energy of solvation -24.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.228 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.668 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds