Wall clock time and date at job start Sat Mar 6 2021 20:08:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86295 * 109.47161 * 2 1 4 4 C 1.50694 * 109.47219 * 120.00640 * 2 1 3 5 5 C 1.31224 * 118.52109 * 250.25759 * 4 2 1 6 6 N 1.38921 * 121.77209 * 180.67978 * 5 4 2 7 7 C 1.47033 * 118.88080 * 346.15662 * 6 5 4 8 8 C 1.50701 * 109.82055 * 163.52269 * 7 6 5 9 9 O 1.21281 * 119.99922 * 339.99941 * 8 7 6 10 10 N 1.34782 * 120.00001 * 159.99796 * 8 7 6 11 11 C 1.46497 * 119.99859 * 179.97438 * 10 8 7 12 12 H 1.09000 * 109.47340 * 35.00612 * 11 10 8 13 13 C 1.52997 * 109.46787 * 155.00532 * 11 10 8 14 14 C 1.53003 * 109.46977 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.47005 * 299.99487 * 14 13 11 16 16 H 1.08990 * 109.47442 * 300.00300 * 15 14 13 17 17 C 1.53003 * 109.47005 * 179.97438 * 15 14 13 18 18 C 1.52997 * 109.46890 * 175.00336 * 17 15 14 19 19 O 1.42903 * 109.47143 * 180.02562 * 18 17 15 20 20 C 1.53005 * 109.46621 * 60.00311 * 15 14 13 21 21 C 1.52996 * 109.46972 * 299.99445 * 20 15 14 22 22 C 1.53534 * 107.66047 * 43.91947 * 7 6 5 23 23 C 1.50212 * 118.54915 * 70.00009 * 4 2 1 24 24 H 0.96703 * 114.00021 * 299.99393 * 1 2 3 25 25 H 1.09008 * 109.46774 * 240.00373 * 2 1 3 26 26 H 1.48499 * 110.00034 * 178.67772 * 3 2 1 27 27 H 1.48497 * 110.00573 * 300.00333 * 3 2 1 28 28 H 1.07997 * 119.15006 * 0.40000 * 5 4 2 29 29 H 0.97001 * 120.56264 * 166.44055 * 6 5 4 30 30 H 1.09006 * 109.82396 * 284.38125 * 7 6 5 31 31 H 0.96995 * 119.99514 * 0.02562 * 10 8 7 32 32 H 1.09001 * 109.46849 * 299.99830 * 13 11 10 33 33 H 1.08992 * 109.47940 * 60.00020 * 13 11 10 34 34 H 1.09000 * 109.47420 * 59.99915 * 14 13 11 35 35 H 1.09004 * 109.47232 * 179.97438 * 14 13 11 36 36 H 1.09004 * 109.47085 * 295.00211 * 17 15 14 37 37 H 1.08997 * 109.47282 * 55.00263 * 17 15 14 38 38 H 1.09004 * 109.47155 * 299.99833 * 18 17 15 39 39 H 1.09003 * 109.47598 * 59.99984 * 18 17 15 40 40 H 0.96701 * 113.99841 * 180.02562 * 19 18 17 41 41 H 1.09000 * 109.47128 * 59.99985 * 20 15 14 42 42 H 1.09001 * 109.46636 * 179.97438 * 20 15 14 43 43 H 1.09000 * 109.47635 * 300.00230 * 21 20 15 44 44 H 1.09005 * 109.46667 * 180.02562 * 21 20 15 45 45 H 1.09002 * 109.61836 * 58.77021 * 22 7 6 46 46 H 1.08999 * 109.62946 * 179.32794 * 22 7 6 47 47 H 1.08997 * 109.32656 * 39.68352 * 23 4 2 48 48 H 1.08999 * 109.32564 * 280.20758 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.5073 -0.0012 2.1722 6 7 3.0072 -0.5884 3.3277 7 6 2.6230 -1.9717 3.6448 8 6 3.5616 -2.5386 4.6786 9 8 4.6505 -2.0332 4.8510 10 7 3.1910 -3.6073 5.4115 11 6 4.1037 -4.1586 6.4160 12 1 4.6693 -3.3487 6.8766 13 6 3.2974 -4.8923 7.4896 14 6 4.2505 -5.4676 8.5391 15 6 5.2164 -6.4467 7.8687 16 1 4.6511 -7.2569 7.4082 17 6 6.1699 -7.0216 8.9181 18 6 7.0529 -8.0917 8.2731 19 8 7.9431 -8.6291 9.2533 20 6 6.0227 -5.7130 6.7951 21 6 5.0695 -5.1377 5.7456 22 6 2.7177 -2.7901 2.3492 23 6 1.7451 -2.1979 1.3266 24 1 -0.3933 0.4416 0.7651 25 1 1.7922 -0.5138 -0.8901 26 1 3.5345 1.7702 0.0322 27 1 1.5614 2.4680 -1.2084 28 1 2.5996 1.0671 2.0441 29 1 3.5964 -0.0927 3.9177 30 1 1.6006 -1.9942 4.0222 31 1 2.3203 -4.0117 5.2733 32 1 2.6096 -4.1947 7.9675 33 1 2.7317 -5.7023 7.0292 34 1 4.8158 -4.6574 8.9996 35 1 3.6761 -5.9900 9.3042 36 1 6.7975 -6.2234 9.3148 37 1 5.5928 -7.4668 9.7284 38 1 6.4253 -8.8898 7.8763 39 1 7.6301 -7.6465 7.4626 40 1 8.5345 -9.3146 8.9137 41 1 6.5880 -4.9028 7.2556 42 1 6.7111 -6.4104 6.3178 43 1 4.5042 -5.9479 5.2851 44 1 5.6440 -4.6154 4.9806 45 1 3.7342 -2.7408 1.9587 46 1 2.4501 -3.8273 2.5508 47 1 1.9285 -2.6483 0.3512 48 1 0.7221 -2.4143 1.6344 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13461142_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:08:34 Heat of formation + Delta-G solvation = -122.519310 kcal Electronic energy + Delta-G solvation = -26386.752357 eV Core-core repulsion = 22634.978412 eV Total energy + Delta-G solvation = -3751.773946 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.193 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.55800 -40.17994 -39.23892 -37.80747 -37.29957 -35.76890 -33.41062 -33.20195 -32.32685 -31.79082 -28.81147 -27.18357 -25.41539 -24.45293 -23.81555 -23.37966 -21.82880 -21.58674 -20.84761 -19.33692 -19.06299 -18.34695 -17.94910 -17.40278 -16.87383 -16.51076 -16.28398 -16.06172 -15.72959 -15.57165 -15.25391 -15.20761 -14.97900 -14.91105 -14.65511 -14.35426 -14.12376 -14.03583 -13.67746 -13.45769 -13.15494 -13.04333 -12.99465 -12.86923 -12.25423 -12.19885 -12.11615 -11.96947 -11.93659 -11.89672 -11.69383 -11.33307 -11.25650 -11.17216 -10.83102 -10.80707 -10.15717 -10.10860 -8.45192 -5.01269 1.34850 1.39827 1.47424 1.63476 1.90951 2.00258 2.64872 3.26036 3.52518 3.63256 3.69242 3.71924 3.82747 3.88428 3.95962 4.01775 4.03085 4.17696 4.26082 4.31684 4.34870 4.40743 4.45658 4.51028 4.54546 4.56665 4.59968 4.62155 4.64886 4.75401 4.77228 4.92023 4.99921 5.03070 5.07776 5.14248 5.15783 5.19252 5.22555 5.22977 5.29256 5.38057 5.44462 5.53523 5.57477 6.25386 6.47965 6.81803 6.84836 6.95709 7.13165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.044 4.044 3 Si 0.756 3.244 4 C -0.291 4.291 5 C 0.145 3.855 6 N -0.738 5.738 7 C 0.140 3.860 8 C 0.512 3.488 9 O -0.575 6.575 10 N -0.708 5.708 11 C 0.147 3.853 12 H 0.063 0.937 13 C -0.117 4.117 14 C -0.111 4.111 15 C -0.077 4.077 16 H 0.086 0.914 17 C -0.116 4.116 18 C 0.069 3.931 19 O -0.602 6.602 20 C -0.113 4.113 21 C -0.123 4.123 22 C -0.121 4.121 23 C -0.051 4.051 24 H 0.392 0.608 25 H 0.091 0.909 26 H -0.297 1.297 27 H -0.307 1.307 28 H 0.148 0.852 29 H 0.407 0.593 30 H 0.116 0.884 31 H 0.418 0.582 32 H 0.077 0.923 33 H 0.088 0.912 34 H 0.057 0.943 35 H 0.079 0.921 36 H 0.056 0.944 37 H 0.067 0.933 38 H 0.056 0.944 39 H 0.052 0.948 40 H 0.396 0.604 41 H 0.052 0.948 42 H 0.070 0.930 43 H 0.079 0.921 44 H 0.042 0.958 45 H 0.051 0.949 46 H 0.099 0.901 47 H 0.063 0.937 48 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.622 -3.216 3.047 6.403 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.156 4.156 3 Si 0.664 3.336 4 C -0.301 4.301 5 C 0.025 3.975 6 N -0.370 5.370 7 C 0.031 3.969 8 C 0.298 3.702 9 O -0.454 6.454 10 N -0.359 5.359 11 C 0.042 3.958 12 H 0.081 0.919 13 C -0.155 4.155 14 C -0.149 4.149 15 C -0.095 4.095 16 H 0.104 0.896 17 C -0.154 4.154 18 C -0.008 4.008 19 O -0.410 6.410 20 C -0.151 4.151 21 C -0.161 4.161 22 C -0.160 4.160 23 C -0.088 4.088 24 H 0.242 0.758 25 H 0.108 0.892 26 H -0.225 1.225 27 H -0.236 1.236 28 H 0.165 0.835 29 H 0.243 0.757 30 H 0.134 0.866 31 H 0.255 0.745 32 H 0.096 0.904 33 H 0.106 0.894 34 H 0.076 0.924 35 H 0.098 0.902 36 H 0.075 0.925 37 H 0.086 0.914 38 H 0.074 0.926 39 H 0.070 0.930 40 H 0.246 0.754 41 H 0.071 0.929 42 H 0.088 0.912 43 H 0.098 0.902 44 H 0.061 0.939 45 H 0.070 0.930 46 H 0.118 0.882 47 H 0.081 0.919 48 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -3.660 -2.282 2.625 5.049 hybrid contribution 0.782 -0.729 -0.686 1.270 sum -2.878 -3.011 1.939 4.595 Atomic orbital electron populations 1.86434 1.18103 1.82096 1.50467 1.24735 0.84718 1.08614 0.97532 0.94397 0.77488 0.76545 0.85143 1.21009 1.14532 0.96640 0.97943 1.20523 0.94689 0.96326 0.85983 1.44400 1.54557 1.12630 1.25437 1.21105 0.97960 0.83804 0.94016 1.20903 0.87317 0.80316 0.81647 1.90725 1.24323 1.61493 1.68874 1.45934 1.20964 1.30954 1.38078 1.20986 0.90929 0.95455 0.88427 0.91887 1.21747 0.97871 1.00454 0.95402 1.21522 0.97071 0.98557 0.97739 1.21074 0.95694 0.97962 0.94798 0.89574 1.21558 0.97459 0.97617 0.98735 1.22375 0.91829 0.96110 0.90536 1.86430 1.54206 1.59987 1.40425 1.21605 0.97722 0.99650 0.96132 1.21841 0.97600 0.98750 0.97939 1.21827 1.00287 0.99892 0.94021 1.19934 0.99089 0.91341 0.98450 0.75837 0.89186 1.22476 1.23556 0.83523 0.75652 0.86617 0.74452 0.90427 0.89357 0.92406 0.90217 0.92474 0.91424 0.92557 0.92965 0.75435 0.92887 0.91187 0.90236 0.93893 0.93033 0.88218 0.91856 0.90276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.62 12.88 -148.98 -1.92 -2.54 16 2 C -0.04 -0.04 2.81 71.23 0.20 0.16 16 3 Si 0.76 -0.08 29.73 68.60 2.04 1.96 16 4 C -0.29 0.07 5.37 -16.86 -0.09 -0.02 16 5 C 0.15 -0.21 9.62 83.31 0.80 0.60 16 6 N -0.74 0.35 5.46 -328.92 -1.80 -1.45 16 7 C 0.14 -0.41 3.35 44.32 0.15 -0.26 16 8 C 0.51 0.40 7.05 87.66 0.62 1.02 16 9 O -0.58 -5.78 15.77 -3.03 -0.05 -5.82 16 10 N -0.71 3.48 5.08 -442.53 -2.25 1.23 16 11 C 0.15 -0.41 2.45 44.99 0.11 -0.30 16 12 H 0.06 0.20 7.58 -2.39 -0.02 0.18 16 13 C -0.12 0.85 5.39 30.59 0.16 1.01 16 14 C -0.11 0.59 5.20 30.60 0.16 0.74 16 15 C -0.08 0.35 2.19 -10.79 -0.02 0.32 16 16 H 0.09 -0.55 8.14 -2.39 -0.02 -0.56 16 17 C -0.12 0.13 5.05 30.59 0.15 0.29 16 18 C 0.07 -0.09 6.80 71.98 0.49 0.40 16 19 O -0.60 -1.45 13.66 -148.98 -2.04 -3.49 16 20 C -0.11 0.26 4.96 30.59 0.15 0.41 16 21 C -0.12 0.23 5.50 30.59 0.17 0.40 16 22 C -0.12 0.31 5.48 30.79 0.17 0.48 16 23 C -0.05 0.07 5.85 29.71 0.17 0.24 16 24 H 0.39 -2.89 8.70 -74.06 -0.64 -3.54 16 25 H 0.09 0.31 7.96 -2.38 -0.02 0.29 16 26 H -0.30 -1.78 7.11 99.48 0.71 -1.07 16 27 H -0.31 -2.47 7.11 99.48 0.71 -1.77 16 28 H 0.15 -0.77 4.51 -2.91 -0.01 -0.78 16 29 H 0.41 0.24 8.12 -92.71 -0.75 -0.51 16 30 H 0.12 -0.89 8.14 -2.38 -0.02 -0.91 16 31 H 0.42 -4.75 8.60 -92.71 -0.80 -5.54 16 32 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 33 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 34 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 35 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 36 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.05 -0.13 6.56 -2.39 -0.02 -0.15 16 40 H 0.40 -2.42 9.12 -74.06 -0.68 -3.09 16 41 H 0.05 0.04 8.14 -2.39 -0.02 0.02 16 42 H 0.07 -0.19 6.56 -2.39 -0.02 -0.21 16 43 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 44 H 0.04 0.16 8.14 -2.38 -0.02 0.14 16 45 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 46 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 47 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 48 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 Total: 0.00 -21.35 371.83 -4.46 -25.81 By element: Atomic # 1 Polarization: -19.36 SS G_CDS: -1.85 Total: -21.20 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: 3.39 Total: 5.50 kcal Atomic # 7 Polarization: 3.82 SS G_CDS: -4.04 Total: -0.22 kcal Atomic # 8 Polarization: -7.85 SS G_CDS: -4.00 Total: -11.85 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: 2.04 Total: 1.96 kcal Total: -21.35 -4.46 -25.81 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.707 kcal (2) G-P(sol) polarization free energy of solvation -21.352 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.060 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.812 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.519 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds