Wall clock time and date at job start Sat Mar 6 2021 20:08:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47349 * 2 1 4 4 C 1.50703 * 109.47055 * 240.00160 * 2 1 3 5 5 C 1.38271 * 119.94343 * 119.72621 * 4 2 1 6 6 C 1.38145 * 120.04946 * 179.72605 * 5 4 2 7 7 C 1.38732 * 119.94798 * 0.55107 * 6 5 4 8 8 O 1.35901 * 120.05434 * 179.74942 * 7 6 5 9 9 C 1.42900 * 117.00018 * 359.97392 * 8 7 6 10 10 C 1.53001 * 109.47042 * 179.97438 * 9 8 7 11 11 C 1.50693 * 109.47279 * 180.02562 * 10 9 8 12 12 O 1.21289 * 119.99794 * 0.02562 * 11 10 9 13 13 N 1.34776 * 120.00447 * 180.02562 * 11 10 9 14 14 C 1.46498 * 120.00540 * 179.97438 * 13 11 10 15 15 H 1.09001 * 109.46766 * 34.99789 * 14 13 11 16 16 C 1.53003 * 109.47203 * 154.99378 * 14 13 11 17 17 C 1.53000 * 109.46960 * 180.02562 * 16 14 13 18 18 C 1.52996 * 109.47496 * 300.00577 * 17 16 14 19 19 H 1.09006 * 109.47032 * 300.00335 * 18 17 16 20 20 C 1.53000 * 109.47496 * 180.02562 * 18 17 16 21 21 C 1.53001 * 109.47408 * 174.99587 * 20 18 17 22 22 O 1.42900 * 109.47279 * 179.97438 * 21 20 18 23 23 C 1.53002 * 109.47118 * 59.99686 * 18 17 16 24 24 C 1.52994 * 109.47298 * 300.00190 * 23 18 17 25 25 C 1.38729 * 119.88576 * 359.72327 * 7 6 5 26 26 C 1.38146 * 119.94828 * 0.02562 * 25 7 6 27 27 H 0.96708 * 114.00101 * 59.99198 * 1 2 3 28 28 H 1.09002 * 109.46984 * 120.00249 * 2 1 3 29 29 H 1.48497 * 110.00028 * 298.68295 * 3 2 1 30 30 H 1.48501 * 109.99652 * 59.99990 * 3 2 1 31 31 H 1.07998 * 119.96980 * 359.97438 * 5 4 2 32 32 H 1.08003 * 120.01984 * 180.27978 * 6 5 4 33 33 H 1.08998 * 109.47035 * 300.00179 * 9 8 7 34 34 H 1.09000 * 109.46982 * 60.00472 * 9 8 7 35 35 H 1.08995 * 109.47222 * 300.00518 * 10 9 8 36 36 H 1.09000 * 109.46812 * 60.00410 * 10 9 8 37 37 H 0.97004 * 119.99630 * 359.97438 * 13 11 10 38 38 H 1.08995 * 109.47409 * 300.00626 * 16 14 13 39 39 H 1.09001 * 109.46924 * 60.00508 * 16 14 13 40 40 H 1.09001 * 109.46890 * 60.00483 * 17 16 14 41 41 H 1.09003 * 109.46917 * 180.02562 * 17 16 14 42 42 H 1.08992 * 109.46959 * 294.99985 * 20 18 17 43 43 H 1.09002 * 109.46886 * 54.99648 * 20 18 17 44 44 H 1.08996 * 109.47448 * 300.00630 * 21 20 18 45 45 H 1.09001 * 109.46536 * 60.00058 * 21 20 18 46 46 H 0.96694 * 114.00082 * 180.02562 * 22 21 20 47 47 H 1.08998 * 109.47162 * 60.00739 * 23 18 17 48 48 H 1.09007 * 109.47185 * 180.02562 * 23 18 17 49 49 H 1.09001 * 109.47090 * 300.00013 * 24 23 18 50 50 H 1.09003 * 109.47021 * 179.97438 * 24 23 18 51 51 H 1.08006 * 120.02540 * 179.97438 * 25 7 6 52 52 H 1.07997 * 119.97252 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7215 -0.0356 -2.1428 6 6 3.1878 -0.6863 -3.2686 7 6 2.8533 -2.0145 -3.4894 8 8 3.3067 -2.6552 -4.5988 9 6 4.1231 -1.8999 -5.4960 10 6 4.5352 -2.7823 -6.6761 11 6 5.3967 -1.9861 -7.6220 12 8 5.6560 -0.8270 -7.3762 13 7 5.8790 -2.5618 -8.7410 14 6 6.7161 -1.7876 -9.6609 15 1 7.3347 -1.0934 -9.0922 16 6 7.6143 -2.7378 -10.4555 17 6 8.4889 -1.9291 -11.4157 18 6 7.5971 -1.1444 -12.3799 19 1 6.9784 -1.8384 -12.9490 20 6 8.4717 -0.3362 -13.3405 21 6 7.5859 0.3496 -14.3825 22 8 8.4027 1.1049 -15.2794 23 6 6.6989 -0.1943 -11.5852 24 6 5.8243 -1.0029 -10.6251 25 6 2.0557 -2.6875 -2.5754 26 6 1.5961 -2.0340 -1.4484 27 1 -0.3934 0.4418 -0.7650 28 1 1.7923 -0.5139 0.8900 29 1 1.5879 2.4586 -1.2242 30 1 1.5615 2.4678 1.2085 31 1 2.9775 0.9997 -1.9729 32 1 3.8087 -0.1601 -3.9786 33 1 3.5613 -1.0410 -5.8629 34 1 5.0146 -1.5543 -4.9726 35 1 5.0971 -3.6410 -6.3088 36 1 3.6439 -3.1283 -7.1996 37 1 5.6719 -3.4890 -8.9374 38 1 8.2499 -3.2965 -9.7686 39 1 6.9956 -3.4320 -11.0242 40 1 9.1076 -1.2352 -10.8467 41 1 9.1285 -2.6061 -11.9821 42 1 9.0250 0.4179 -12.7810 43 1 9.1728 -1.0034 -13.8422 44 1 7.0325 -0.4046 -14.9421 45 1 6.8849 1.0167 -13.8808 46 1 7.9065 1.5680 -15.9680 47 1 7.3176 0.4997 -11.0162 48 1 6.0632 0.3645 -12.2722 49 1 5.2056 -1.6969 -11.1942 50 1 5.1847 -0.3260 -10.0586 51 1 1.7935 -3.7214 -2.7452 52 1 0.9754 -2.5577 -0.7365 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13461142_4549602.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:08:54 Heat of formation + Delta-G solvation = -152.826666 kcal Electronic energy + Delta-G solvation = -29904.961857 eV Core-core repulsion = 25642.165124 eV Total energy + Delta-G solvation = -4262.796733 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.197 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.45663 -41.05748 -39.77791 -39.10835 -37.81188 -37.23312 -35.75691 -33.62874 -32.65527 -31.99326 -31.88333 -31.35054 -28.66277 -26.56002 -25.61415 -24.43004 -23.82671 -23.25811 -22.18107 -21.79900 -21.48650 -20.84969 -19.48533 -18.40996 -18.37169 -17.76364 -17.53438 -17.47886 -16.91427 -16.54561 -16.32344 -16.12983 -15.98135 -15.73141 -15.52022 -15.30633 -15.12835 -14.76126 -14.75269 -14.67811 -14.43989 -14.22116 -14.01197 -13.76245 -13.52624 -13.39758 -13.25611 -13.02584 -12.86013 -12.85008 -12.26891 -12.23609 -12.16496 -12.05254 -12.03443 -11.81005 -11.79539 -11.54203 -11.44551 -11.26647 -10.92223 -10.87255 -10.55236 -10.13869 -9.98710 -9.15888 -4.92856 0.33801 0.36157 1.32982 1.51229 1.62758 1.67400 1.99401 2.43881 2.70838 3.13245 3.41504 3.46673 3.53349 3.59495 3.71540 3.78095 3.80519 3.85013 3.89210 3.91876 3.99522 4.05640 4.17270 4.22688 4.25719 4.30969 4.34013 4.37855 4.40279 4.43426 4.45231 4.51302 4.57072 4.58004 4.62133 4.65852 4.76852 4.83634 4.90968 4.92072 5.00111 5.03659 5.08981 5.09465 5.12239 5.22570 5.26524 5.33533 5.36925 5.43062 5.53706 5.75494 6.32834 6.38974 6.44378 6.64924 7.08639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.681 3.319 4 C -0.157 4.157 5 C -0.075 4.075 6 C -0.203 4.203 7 C 0.138 3.862 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.521 3.479 12 O -0.537 6.537 13 N -0.726 5.726 14 C 0.144 3.856 15 H 0.090 0.910 16 C -0.126 4.126 17 C -0.110 4.110 18 C -0.086 4.086 19 H 0.074 0.926 20 C -0.117 4.117 21 C 0.073 3.927 22 O -0.577 6.577 23 C -0.115 4.115 24 C -0.129 4.129 25 C -0.151 4.151 26 C -0.053 4.053 27 H 0.376 0.624 28 H 0.118 0.882 29 H -0.261 1.261 30 H -0.257 1.257 31 H 0.129 0.871 32 H 0.134 0.866 33 H 0.072 0.928 34 H 0.074 0.926 35 H 0.107 0.893 36 H 0.106 0.894 37 H 0.402 0.598 38 H 0.071 0.929 39 H 0.069 0.931 40 H 0.068 0.932 41 H 0.071 0.929 42 H 0.071 0.929 43 H 0.071 0.929 44 H 0.044 0.956 45 H 0.048 0.952 46 H 0.381 0.619 47 H 0.068 0.932 48 H 0.067 0.933 49 H 0.064 0.936 50 H 0.068 0.932 51 H 0.133 0.867 52 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.265 -3.127 -3.419 4.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.582 3.418 4 C -0.158 4.158 5 C -0.093 4.093 6 C -0.221 4.221 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.307 3.693 12 O -0.414 6.414 13 N -0.377 5.377 14 C 0.040 3.960 15 H 0.108 0.892 16 C -0.164 4.164 17 C -0.148 4.148 18 C -0.105 4.105 19 H 0.092 0.908 20 C -0.154 4.154 21 C -0.005 4.005 22 O -0.382 6.382 23 C -0.153 4.153 24 C -0.168 4.168 25 C -0.169 4.169 26 C -0.071 4.071 27 H 0.223 0.777 28 H 0.135 0.865 29 H -0.186 1.186 30 H -0.182 1.182 31 H 0.147 0.853 32 H 0.152 0.848 33 H 0.091 0.909 34 H 0.092 0.908 35 H 0.125 0.875 36 H 0.125 0.875 37 H 0.236 0.764 38 H 0.090 0.910 39 H 0.088 0.912 40 H 0.087 0.913 41 H 0.090 0.910 42 H 0.090 0.910 43 H 0.089 0.911 44 H 0.062 0.938 45 H 0.066 0.934 46 H 0.228 0.772 47 H 0.086 0.914 48 H 0.086 0.914 49 H 0.083 0.917 50 H 0.087 0.913 51 H 0.151 0.849 52 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 1.783 -2.194 -2.364 3.685 hybrid contribution -1.594 -0.296 -1.141 1.983 sum 0.189 -2.489 -3.505 4.303 Atomic orbital electron populations 1.86591 1.17876 1.79930 1.49348 1.24934 0.83813 1.10707 0.98423 0.95056 0.91813 0.74729 0.80192 1.20184 1.02052 0.95524 0.97994 1.20808 0.96077 0.99222 0.93172 1.21268 1.05793 0.94361 1.00709 1.18995 0.94032 0.91009 0.86732 1.85976 1.65062 1.40457 1.31514 1.22426 0.94720 0.93817 0.89191 1.21476 1.01334 0.99936 0.95455 1.20289 0.80004 0.87479 0.81542 1.90754 1.58694 1.17182 1.74772 1.46059 1.52826 1.15908 1.22914 1.21051 0.91522 0.93524 0.89896 0.89203 1.21806 0.98289 0.97967 0.98349 1.21512 0.97536 0.98875 0.96888 1.21148 0.96581 0.96986 0.95765 0.90808 1.21561 0.98309 0.99514 0.96046 1.22271 0.93002 0.94102 0.91121 1.86473 1.38113 1.67993 1.45669 1.21638 0.98073 0.97812 0.97805 1.21917 0.98295 0.99267 0.97277 1.20504 1.00913 1.01065 0.94463 1.20829 0.96927 0.93449 0.95932 0.77687 0.86469 1.18595 1.18234 0.85349 0.84798 0.90944 0.90794 0.87458 0.87524 0.76350 0.91020 0.91196 0.91307 0.91045 0.91018 0.91054 0.93769 0.93425 0.77226 0.91371 0.91407 0.91697 0.91314 0.84877 0.84896 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.91 12.77 -35.23 -0.45 -1.36 16 2 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 3 Si 0.68 -0.19 29.78 -169.99 -5.06 -5.25 16 4 C -0.16 -0.13 5.39 -104.60 -0.56 -0.70 16 5 C -0.08 -0.05 8.66 -39.60 -0.34 -0.39 16 6 C -0.20 -0.24 9.04 -39.43 -0.36 -0.60 16 7 C 0.14 0.26 6.69 -39.22 -0.26 0.00 16 8 O -0.32 -0.47 10.14 -19.43 -0.20 -0.67 16 9 C 0.07 0.00 4.03 37.16 0.15 0.15 16 10 C -0.14 0.29 6.07 -27.89 -0.17 0.12 16 11 C 0.52 -0.02 7.79 -10.99 -0.09 -0.10 16 12 O -0.54 -2.10 15.65 5.55 0.09 -2.01 16 13 N -0.73 1.56 5.08 -53.81 -0.27 1.29 16 14 C 0.14 -0.20 2.45 -67.93 -0.17 -0.37 16 15 H 0.09 0.07 7.58 -51.93 -0.39 -0.32 16 16 C -0.13 0.36 5.39 -26.73 -0.14 0.22 16 17 C -0.11 0.26 5.20 -26.73 -0.14 0.12 16 18 C -0.09 0.18 2.19 -90.62 -0.20 -0.02 16 19 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 20 C -0.12 0.08 5.05 -26.73 -0.14 -0.05 16 21 C 0.07 -0.05 6.80 37.16 0.25 0.21 16 22 O -0.58 -0.61 13.66 -35.23 -0.48 -1.10 16 23 C -0.12 0.17 4.96 -26.73 -0.13 0.04 16 24 C -0.13 0.15 5.50 -26.74 -0.15 0.00 16 25 C -0.15 -0.21 9.99 -39.43 -0.39 -0.60 16 26 C -0.05 -0.06 9.60 -39.60 -0.38 -0.44 16 27 H 0.38 -0.37 8.70 45.56 0.40 0.03 16 28 H 0.12 -0.05 7.96 -51.93 -0.41 -0.47 16 29 H -0.26 -0.46 7.10 56.52 0.40 -0.06 16 30 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 31 H 0.13 -0.13 4.87 -52.49 -0.26 -0.39 16 32 H 0.13 0.02 6.30 -52.48 -0.33 -0.31 16 33 H 0.07 0.03 7.62 -51.93 -0.40 -0.36 16 34 H 0.07 0.02 7.62 -51.93 -0.40 -0.37 16 35 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 36 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 37 H 0.40 -1.92 8.60 -40.82 -0.35 -2.27 16 38 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 39 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 42 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 43 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 45 H 0.05 -0.06 6.57 -51.93 -0.34 -0.41 16 46 H 0.38 -1.20 9.12 45.56 0.42 -0.78 16 47 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 48 H 0.07 -0.11 6.57 -51.92 -0.34 -0.45 16 49 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 50 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 51 H 0.13 0.02 8.06 -52.48 -0.42 -0.40 16 52 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 412.38 15.07 6.21 6.21 Total: 0.00 -8.65 412.38 -11.22 -19.87 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -7.95 Total: -14.65 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -3.11 Total: -2.33 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -0.27 Total: 1.29 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -1.04 Total: -5.13 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.06 Total: -5.25 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -8.65 -11.22 -19.87 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_4549602.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.956 kcal (2) G-P(sol) polarization free energy of solvation -8.649 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.222 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.870 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds