Wall clock time and date at job start Sat Mar 6 2021 20:09:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47098 * 2 1 4 4 C 1.50703 * 109.47148 * 120.00020 * 2 1 3 5 5 C 1.38245 * 119.97316 * 245.00583 * 4 2 1 6 6 C 1.38284 * 120.11509 * 179.97438 * 5 4 2 7 7 C 1.38121 * 120.05388 * 359.97438 * 6 5 4 8 8 C 1.38754 * 119.94458 * 0.02562 * 7 6 5 9 9 O 1.35902 * 120.05674 * 180.02562 * 8 7 6 10 10 C 1.42895 * 117.00115 * 0.02562 * 9 8 7 11 11 C 1.50703 * 109.47270 * 179.97438 * 10 9 8 12 12 O 1.21273 * 119.99921 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99935 * 180.02562 * 11 10 9 14 14 C 1.46496 * 120.00072 * 179.97438 * 13 11 10 15 15 H 1.09002 * 109.47021 * 34.99856 * 14 13 11 16 16 C 1.53005 * 109.47414 * 154.99744 * 14 13 11 17 17 C 1.52997 * 109.47452 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.46817 * 300.00239 * 17 16 14 19 19 H 1.08992 * 109.47063 * 299.99823 * 18 17 16 20 20 C 1.53001 * 109.46637 * 179.97438 * 18 17 16 21 21 C 1.52994 * 109.47203 * 65.00295 * 20 18 17 22 22 O 1.42903 * 109.47758 * 179.97438 * 21 20 18 23 23 C 1.53000 * 109.47233 * 60.00194 * 18 17 16 24 24 C 1.52997 * 109.47060 * 299.99657 * 23 18 17 25 25 C 1.38166 * 119.97197 * 65.29816 * 4 2 1 26 26 H 0.96694 * 113.99936 * 300.00136 * 1 2 3 27 27 H 1.08998 * 109.47658 * 239.99882 * 2 1 3 28 28 H 1.48502 * 109.99713 * 178.67816 * 3 2 1 29 29 H 1.48500 * 110.00167 * 299.99803 * 3 2 1 30 30 H 1.08004 * 119.94099 * 359.97438 * 5 4 2 31 31 H 1.07998 * 119.97505 * 180.02562 * 6 5 4 32 32 H 1.07997 * 120.03414 * 180.02562 * 7 6 5 33 33 H 1.08999 * 109.47100 * 59.99735 * 10 9 8 34 34 H 1.09005 * 109.47224 * 299.99910 * 10 9 8 35 35 H 0.97007 * 120.00235 * 359.97438 * 13 11 10 36 36 H 1.09002 * 109.46935 * 60.00059 * 16 14 13 37 37 H 1.09001 * 109.46812 * 300.00401 * 16 14 13 38 38 H 1.08993 * 109.47194 * 179.97438 * 17 16 14 39 39 H 1.09002 * 109.46695 * 59.99734 * 17 16 14 40 40 H 1.09008 * 109.46864 * 185.00001 * 20 18 17 41 41 H 1.09000 * 109.47679 * 305.00033 * 20 18 17 42 42 H 1.09005 * 109.47243 * 300.00091 * 21 20 18 43 43 H 1.09000 * 109.47476 * 59.99602 * 21 20 18 44 44 H 0.96693 * 114.00094 * 179.97438 * 22 21 20 45 45 H 1.09002 * 109.47398 * 59.99826 * 23 18 17 46 46 H 1.09001 * 109.47194 * 180.02562 * 23 18 17 47 47 H 1.08996 * 109.47853 * 180.02562 * 24 23 18 48 48 H 1.09002 * 109.47153 * 300.00319 * 24 23 18 49 49 H 1.07998 * 120.03265 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6386 -0.0117 2.1910 6 6 3.1005 -0.6605 3.3215 7 6 2.8556 -2.0089 3.4938 8 6 2.1459 -2.7125 2.5312 9 8 1.9032 -4.0391 2.6987 10 6 2.4076 -4.6456 3.8902 11 6 2.0440 -6.1080 3.9023 12 8 1.4153 -6.5842 2.9810 13 7 2.4176 -6.8868 4.9369 14 6 2.0637 -8.3083 4.9489 15 1 2.0929 -8.6986 3.9316 16 6 3.0623 -9.0752 5.8182 17 6 2.6931 -10.5600 5.8302 18 6 1.2838 -10.7304 6.4011 19 1 1.2543 -10.3404 7.4184 20 6 0.9144 -12.2150 6.4125 21 6 1.8355 -12.9624 7.3787 22 8 1.4902 -14.3490 7.3899 23 6 0.2852 -9.9635 5.5317 24 6 0.6544 -8.4788 5.5197 25 6 1.6899 -2.0609 1.3948 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5138 -0.8899 28 1 3.5346 1.7702 0.0322 29 1 1.5615 2.4679 -1.2085 30 1 2.8308 1.0428 2.0583 31 1 3.6524 -0.1124 4.0707 32 1 3.2161 -2.5152 4.3770 33 1 1.9705 -4.1557 4.7603 34 1 3.4921 -4.5402 3.9206 35 1 2.9208 -6.5060 5.6737 36 1 3.0331 -8.6850 6.8355 37 1 4.0662 -8.9541 5.4112 38 1 3.4047 -11.1063 6.4491 39 1 2.7225 -10.9499 4.8127 40 1 -0.1205 -12.3295 6.7353 41 1 1.0296 -12.6260 5.4095 42 1 2.8704 -12.8479 7.0560 43 1 1.7203 -12.5516 8.3817 44 1 2.0350 -14.8853 7.9820 45 1 0.3147 -10.3535 4.5143 46 1 -0.7187 -10.0846 5.9387 47 1 -0.0571 -7.9324 4.9008 48 1 0.6249 -8.0888 6.5371 49 1 1.1410 -2.6073 0.6421 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13461142_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:09:41 Heat of formation + Delta-G solvation = -142.516553 kcal Electronic energy + Delta-G solvation = -28269.332284 eV Core-core repulsion = 24162.520250 eV Total energy + Delta-G solvation = -4106.812034 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -41.61664 -40.94122 -39.75762 -38.86230 -37.77555 -37.20329 -35.73669 -33.04447 -32.49743 -31.93779 -31.62091 -29.70799 -28.03492 -26.76778 -24.64633 -23.70436 -23.60896 -22.66129 -21.78986 -21.54144 -20.87941 -19.33659 -18.55370 -18.35298 -17.80756 -17.48141 -17.28271 -17.05183 -16.79093 -16.43411 -16.14390 -15.86397 -15.54801 -15.40239 -15.16967 -15.02302 -14.95407 -14.71943 -14.56238 -14.15805 -13.97222 -13.88366 -13.63411 -13.44176 -13.25572 -12.98471 -12.80773 -12.58216 -12.39812 -12.23948 -12.18815 -11.98742 -11.97322 -11.79372 -11.67464 -11.45105 -11.26342 -10.89334 -10.80684 -10.47199 -10.16058 -9.96135 -9.29051 -5.03158 0.17459 0.37590 1.25560 1.44659 1.48092 1.64497 1.97884 2.52680 2.64224 3.14473 3.39612 3.48170 3.55289 3.56280 3.62446 3.73541 3.84160 3.85277 3.87112 3.93359 3.98335 4.05641 4.15992 4.16503 4.27053 4.29582 4.33769 4.39057 4.43222 4.45719 4.49386 4.51422 4.59886 4.65342 4.83794 4.92089 4.94078 4.95742 5.02980 5.03801 5.13703 5.14804 5.20616 5.28792 5.32089 5.35465 5.40989 5.43388 5.62497 6.22466 6.37022 6.58242 6.64918 7.08648 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.071 4.071 3 Si 0.692 3.308 4 C -0.080 4.080 5 C -0.153 4.153 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.040 3.960 11 C 0.516 3.484 12 O -0.510 6.510 13 N -0.725 5.725 14 C 0.146 3.854 15 H 0.091 0.909 16 C -0.126 4.126 17 C -0.115 4.115 18 C -0.086 4.086 19 H 0.074 0.926 20 C -0.117 4.117 21 C 0.073 3.927 22 O -0.577 6.577 23 C -0.111 4.111 24 C -0.129 4.129 25 C -0.121 4.121 26 H 0.379 0.621 27 H 0.115 0.885 28 H -0.257 1.257 29 H -0.254 1.254 30 H 0.130 0.870 31 H 0.132 0.868 32 H 0.130 0.870 33 H 0.095 0.905 34 H 0.094 0.906 35 H 0.401 0.599 36 H 0.070 0.930 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.069 0.931 40 H 0.071 0.929 41 H 0.071 0.929 42 H 0.047 0.953 43 H 0.044 0.956 44 H 0.381 0.619 45 H 0.068 0.932 46 H 0.069 0.931 47 H 0.070 0.930 48 H 0.065 0.935 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.928 2.285 8.137 9.320 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.594 3.406 4 C -0.080 4.080 5 C -0.171 4.171 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.300 3.700 12 O -0.384 6.384 13 N -0.379 5.379 14 C 0.043 3.957 15 H 0.109 0.891 16 C -0.164 4.164 17 C -0.153 4.153 18 C -0.104 4.104 19 H 0.092 0.908 20 C -0.155 4.155 21 C -0.005 4.005 22 O -0.382 6.382 23 C -0.149 4.149 24 C -0.168 4.168 25 C -0.139 4.139 26 H 0.227 0.773 27 H 0.133 0.867 28 H -0.182 1.182 29 H -0.179 1.179 30 H 0.147 0.853 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.112 0.888 34 H 0.112 0.888 35 H 0.235 0.765 36 H 0.088 0.912 37 H 0.089 0.911 38 H 0.089 0.911 39 H 0.088 0.912 40 H 0.090 0.910 41 H 0.090 0.910 42 H 0.065 0.935 43 H 0.062 0.938 44 H 0.228 0.772 45 H 0.086 0.914 46 H 0.088 0.912 47 H 0.088 0.912 48 H 0.084 0.916 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 3.484 2.298 5.887 7.217 hybrid contribution 0.996 -0.564 0.976 1.504 sum 4.479 1.734 6.863 8.377 Atomic orbital electron populations 1.86529 1.16855 1.81719 1.49177 1.25138 0.85436 1.10270 0.97302 0.94702 0.81003 0.77760 0.87175 1.20161 0.97761 0.93573 0.96534 1.20923 1.01447 0.99558 0.95122 1.20906 0.97564 0.93607 0.97002 1.21294 1.04714 0.96083 1.00416 1.19053 0.95345 0.82480 0.94749 1.86177 1.73761 1.20099 1.40000 1.22475 1.00629 0.92017 0.88729 1.20031 0.79918 0.87453 0.82579 1.90790 1.37900 1.74558 1.35135 1.45917 1.58474 1.10281 1.23180 1.21062 0.94349 0.79131 1.01190 0.89119 1.21810 0.98690 0.95797 1.00085 1.21628 0.96480 0.95069 1.02083 1.21146 0.94972 0.94348 0.99974 0.90781 1.21569 1.00002 0.93748 1.00174 1.22272 0.97945 0.81590 0.98645 1.86482 1.62845 1.19602 1.69296 1.21531 0.98842 0.94017 1.00549 1.21923 0.96413 0.97022 1.01452 1.20284 1.02881 0.93664 0.97089 0.77333 0.86723 1.18228 1.17924 0.85315 0.85058 0.85248 0.88762 0.88828 0.76469 0.91166 0.91059 0.91104 0.91247 0.91016 0.91000 0.93458 0.93774 0.77248 0.91355 0.91248 0.91158 0.91618 0.84653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.55 12.84 -35.23 -0.45 -1.00 16 2 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.69 -0.61 29.80 -169.99 -5.07 -5.68 16 4 C -0.08 -0.07 5.35 -104.64 -0.56 -0.63 16 5 C -0.15 0.08 8.67 -39.56 -0.34 -0.26 16 6 C -0.07 0.07 10.04 -39.61 -0.40 -0.33 16 7 C -0.21 0.07 9.04 -39.43 -0.36 -0.28 16 8 C 0.13 0.27 6.69 -39.21 -0.26 0.01 16 9 O -0.29 -0.92 9.67 -39.34 -0.38 -1.30 16 10 C 0.04 -0.03 5.22 36.01 0.19 0.15 16 11 C 0.52 0.74 7.87 -10.98 -0.09 0.65 16 12 O -0.51 -3.34 16.16 -14.35 -0.23 -3.57 16 13 N -0.73 1.30 5.08 -53.81 -0.27 1.02 16 14 C 0.15 -0.14 2.45 -67.93 -0.17 -0.31 16 15 H 0.09 0.13 7.58 -51.93 -0.39 -0.27 16 16 C -0.13 0.37 5.39 -26.73 -0.14 0.23 16 17 C -0.11 0.28 4.96 -26.73 -0.13 0.14 16 18 C -0.09 0.16 2.19 -90.62 -0.20 -0.04 16 19 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 20 C -0.12 0.07 5.05 -26.73 -0.14 -0.07 16 21 C 0.07 -0.06 6.80 37.15 0.25 0.19 16 22 O -0.58 -0.58 13.66 -35.23 -0.48 -1.06 16 23 C -0.11 0.11 5.20 -26.73 -0.14 -0.03 16 24 C -0.13 0.09 5.50 -26.73 -0.15 -0.06 16 25 C -0.12 -0.30 9.63 -39.43 -0.38 -0.68 16 26 H 0.38 -1.14 8.70 45.56 0.40 -0.75 16 27 H 0.12 0.11 7.96 -51.93 -0.41 -0.30 16 28 H -0.26 -0.36 7.11 56.52 0.40 0.05 16 29 H -0.25 -0.61 7.11 56.52 0.40 -0.20 16 30 H 0.13 -0.33 4.90 -52.48 -0.26 -0.59 16 31 H 0.13 -0.44 8.06 -52.49 -0.42 -0.87 16 32 H 0.13 -0.39 6.30 -52.49 -0.33 -0.72 16 33 H 0.09 -0.33 7.66 -51.93 -0.40 -0.72 16 34 H 0.09 -0.32 7.66 -51.93 -0.40 -0.71 16 35 H 0.40 -2.03 8.60 -40.82 -0.35 -2.38 16 36 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 37 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.07 -0.21 6.57 -51.93 -0.34 -0.55 16 39 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.07 0.02 8.14 -51.92 -0.42 -0.41 16 41 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.05 -0.09 6.57 -51.93 -0.34 -0.43 16 43 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 44 H 0.38 -1.24 9.12 45.56 0.42 -0.83 16 45 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 46 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 47 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 48 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 49 H 0.14 0.44 8.06 -52.49 -0.42 0.01 16 LS Contribution 391.56 15.07 5.90 5.90 Total: 0.00 -10.72 391.56 -11.00 -21.72 By element: Atomic # 1 Polarization: -7.67 SS G_CDS: -7.11 Total: -14.77 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -2.91 Total: -1.25 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -0.27 Total: 1.02 kcal Atomic # 8 Polarization: -5.39 SS G_CDS: -1.55 Total: -6.94 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.07 Total: -5.68 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -10.72 -11.00 -21.72 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.800 kcal (2) G-P(sol) polarization free energy of solvation -10.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.717 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds