Wall clock time and date at job start Sat Mar 6 2021 20:10:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35962 * 117.00077 * 2 1 4 4 C 1.39443 * 120.12358 * 179.97438 * 3 2 1 5 5 O 1.34780 * 133.23849 * 0.29488 * 4 3 2 6 6 C 1.34934 * 110.83793 * 180.15279 * 5 4 3 7 7 C 1.46996 * 125.13625 * 179.80990 * 6 5 4 8 8 O 1.21653 * 119.99657 * 179.69330 * 7 6 5 9 9 N 1.34773 * 120.00099 * 359.69814 * 7 6 5 10 10 C 1.46506 * 119.99969 * 180.02562 * 9 7 6 11 11 H 1.09005 * 109.46722 * 324.72200 * 10 9 7 12 12 C 1.52995 * 109.47182 * 84.72073 * 10 9 7 13 13 C 1.52996 * 109.46992 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.47258 * 299.99882 * 13 12 10 15 15 H 1.09008 * 109.46926 * 300.00538 * 14 13 12 16 16 C 1.52996 * 109.47599 * 180.02562 * 14 13 12 17 17 C 1.53008 * 109.46966 * 64.99736 * 16 14 13 18 18 O 1.42895 * 109.46785 * 180.02562 * 17 16 14 19 19 C 1.52998 * 109.46851 * 59.99809 * 14 13 12 20 20 C 1.52996 * 109.47346 * 300.00138 * 19 14 13 21 21 C 1.35803 * 109.71955 * 359.54466 * 6 5 4 22 22 C 1.40610 * 119.13938 * 179.97438 * 4 3 2 23 23 C 1.39770 * 120.11987 * 359.97438 * 22 4 3 24 24 C 1.50697 * 120.09411 * 179.97438 * 23 22 4 25 25 O 1.42901 * 109.46792 * 284.99429 * 24 23 22 26 26 Si 1.86307 * 109.47073 * 164.99937 * 24 23 22 27 27 C 1.36633 * 119.81140 * 0.06098 * 23 22 4 28 28 C 1.38267 * 120.11989 * 359.97417 * 3 2 1 29 29 H 1.09007 * 109.47139 * 60.00438 * 1 2 3 30 30 H 1.08999 * 109.47554 * 180.02562 * 1 2 3 31 31 H 1.08993 * 109.47632 * 300.00340 * 1 2 3 32 32 H 0.97005 * 120.00161 * 359.72069 * 9 7 6 33 33 H 1.09007 * 109.47360 * 299.99766 * 12 10 9 34 34 H 1.08997 * 109.47379 * 60.00113 * 12 10 9 35 35 H 1.09008 * 109.47401 * 180.02562 * 13 12 10 36 36 H 1.09001 * 109.47741 * 59.99690 * 13 12 10 37 37 H 1.08996 * 109.47176 * 184.99626 * 16 14 13 38 38 H 1.09005 * 109.47048 * 305.00398 * 16 14 13 39 39 H 1.08996 * 109.47083 * 299.99947 * 17 16 14 40 40 H 1.08997 * 109.46850 * 60.00160 * 17 16 14 41 41 H 0.96702 * 114.00175 * 180.02562 * 18 17 16 42 42 H 1.09010 * 109.46944 * 180.02562 * 19 14 13 43 43 H 1.08997 * 109.47198 * 60.00475 * 19 14 13 44 44 H 1.08997 * 109.47248 * 300.00307 * 20 19 14 45 45 H 1.09005 * 109.46905 * 179.97438 * 20 19 14 46 46 H 1.08003 * 126.95222 * 180.24694 * 21 6 5 47 47 H 1.08998 * 109.47618 * 45.00204 * 24 23 22 48 48 H 0.96705 * 113.99544 * 179.97438 * 25 24 23 49 49 H 1.48500 * 109.99957 * 60.00051 * 26 24 23 50 50 H 1.48504 * 109.99579 * 181.31483 * 26 24 23 51 51 H 1.08001 * 119.75399 * 179.97438 * 27 23 22 52 52 H 1.08002 * 119.66058 * 0.02562 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4140 0.3573 -0.0039 6 6 5.6317 0.9386 0.0024 7 6 6.9131 0.2183 0.0040 8 8 7.9595 0.8388 0.0043 9 7 6.9286 -1.1293 0.0050 10 6 8.2057 -1.8471 0.0071 11 1 8.9343 -1.2942 -0.5860 12 6 8.7135 -1.9803 1.4442 13 6 10.0476 -2.7294 1.4463 14 6 9.8515 -4.1220 0.8435 15 1 9.1231 -4.6752 1.4365 16 6 11.1853 -4.8714 0.8462 17 6 11.6311 -5.1141 2.2896 18 8 12.8771 -5.8136 2.2921 19 6 9.3436 -3.9888 -0.5935 20 6 8.0096 -3.2397 -0.5956 21 6 5.4944 2.2897 0.0013 22 6 4.0554 2.5510 0.0000 23 6 3.2766 3.7116 -0.0016 24 6 3.9382 5.0656 -0.0017 25 8 4.4589 5.3412 1.3002 26 14 2.6870 6.3682 -0.4586 27 6 1.9137 3.6151 -0.0014 28 6 1.2957 2.3726 -0.0005 29 1 -0.3634 0.5138 -0.8901 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5138 0.8899 32 1 6.0942 -1.6240 0.0088 33 1 8.8537 -0.9882 1.8734 34 1 7.9851 -2.5332 2.0372 35 1 10.4092 -2.8247 2.4702 36 1 10.7760 -2.1763 0.8533 37 1 11.0658 -5.8278 0.3372 38 1 11.9377 -4.2759 0.3289 39 1 11.7506 -4.1578 2.7987 40 1 10.8788 -5.7096 2.8069 41 1 13.2206 -6.0022 3.1761 42 1 9.2034 -4.9810 -1.0228 43 1 10.0719 -3.4356 -1.1865 44 1 7.2813 -3.7929 -0.0027 45 1 7.6480 -3.1444 -1.6195 46 1 6.2874 3.0229 0.0016 47 1 4.7514 5.0727 -0.7273 48 1 4.9001 6.1986 1.3739 49 1 1.5729 6.3688 0.5233 50 1 3.3343 7.7042 -0.4931 51 1 1.3128 4.5125 -0.0023 52 1 0.2173 2.3120 -0.0005 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13461142_6672420.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:10:13 Heat of formation + Delta-G solvation = -131.075598 kcal Electronic energy + Delta-G solvation = -34366.183360 eV Core-core repulsion = 29684.732970 eV Total energy + Delta-G solvation = -4681.450390 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -43.61629 -41.16472 -40.55689 -39.54113 -38.97687 -37.76486 -37.17404 -35.77272 -33.53248 -32.92947 -31.93815 -31.85753 -30.93565 -28.95482 -28.31762 -26.28941 -25.25489 -24.18758 -23.91067 -23.46789 -21.89285 -21.67211 -21.54516 -20.94571 -19.61445 -18.79939 -18.55886 -18.46391 -18.29343 -17.59449 -17.38236 -16.96188 -16.65070 -16.46707 -16.31953 -15.99209 -15.71403 -15.63948 -15.34314 -15.14597 -15.01864 -14.70209 -14.56928 -14.47987 -14.11764 -14.00317 -13.94852 -13.70129 -13.51472 -13.38363 -13.20914 -13.19534 -12.93335 -12.65692 -12.43135 -12.22561 -12.17961 -12.06893 -12.01437 -11.81546 -11.71911 -11.43173 -11.27934 -11.13221 -10.90046 -10.83258 -10.50015 -10.16624 -9.71568 -8.94332 -5.01408 -0.54141 0.17383 0.75881 1.20691 1.33812 1.53690 1.88259 1.98206 2.09084 2.11048 2.41541 3.16348 3.22443 3.37762 3.57017 3.59431 3.65346 3.68421 3.86734 3.87880 3.95387 3.99008 4.04092 4.10446 4.12239 4.12978 4.19039 4.22209 4.28133 4.34010 4.38544 4.43550 4.48127 4.48558 4.50533 4.50618 4.56104 4.70293 4.85679 4.89026 4.93177 4.95607 4.97695 5.09453 5.10714 5.13935 5.14670 5.16627 5.27713 5.31264 5.35327 5.39516 5.47069 5.67691 6.19698 6.38604 6.42594 6.68792 6.98517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.024 4.024 7 C 0.603 3.397 8 O -0.510 6.510 9 N -0.714 5.714 10 C 0.144 3.856 11 H 0.094 0.906 12 C -0.131 4.131 13 C -0.115 4.115 14 C -0.087 4.087 15 H 0.074 0.926 16 C -0.116 4.116 17 C 0.072 3.928 18 O -0.577 6.577 19 C -0.109 4.109 20 C -0.127 4.127 21 C -0.105 4.105 22 C -0.082 4.082 23 C -0.051 4.051 24 C -0.075 4.075 25 O -0.533 6.533 26 Si 0.688 3.312 27 C -0.090 4.090 28 C -0.177 4.177 29 H 0.061 0.939 30 H 0.105 0.895 31 H 0.060 0.940 32 H 0.408 0.592 33 H 0.070 0.930 34 H 0.066 0.934 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.071 0.929 38 H 0.071 0.929 39 H 0.048 0.952 40 H 0.044 0.956 41 H 0.381 0.619 42 H 0.071 0.929 43 H 0.069 0.931 44 H 0.071 0.929 45 H 0.073 0.927 46 H 0.172 0.828 47 H 0.077 0.923 48 H 0.380 0.620 49 H -0.253 1.253 50 H -0.259 1.259 51 H 0.140 0.860 52 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.831 -0.734 -1.463 5.100 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.075 6.075 6 C -0.074 4.074 7 C 0.388 3.612 8 O -0.387 6.387 9 N -0.364 5.364 10 C 0.040 3.960 11 H 0.112 0.888 12 C -0.169 4.169 13 C -0.153 4.153 14 C -0.106 4.106 15 H 0.092 0.908 16 C -0.154 4.154 17 C -0.005 4.005 18 O -0.383 6.383 19 C -0.147 4.147 20 C -0.165 4.165 21 C -0.125 4.125 22 C -0.083 4.083 23 C -0.051 4.051 24 C -0.184 4.184 25 O -0.340 6.340 26 Si 0.589 3.411 27 C -0.108 4.108 28 C -0.196 4.196 29 H 0.080 0.920 30 H 0.123 0.877 31 H 0.078 0.922 32 H 0.243 0.757 33 H 0.089 0.911 34 H 0.085 0.915 35 H 0.087 0.913 36 H 0.087 0.913 37 H 0.089 0.911 38 H 0.090 0.910 39 H 0.066 0.934 40 H 0.062 0.938 41 H 0.228 0.772 42 H 0.090 0.910 43 H 0.088 0.912 44 H 0.089 0.911 45 H 0.091 0.909 46 H 0.190 0.810 47 H 0.095 0.905 48 H 0.228 0.772 49 H -0.178 1.178 50 H -0.184 1.184 51 H 0.157 0.843 52 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -4.782 -0.615 -1.760 5.133 hybrid contribution 0.188 0.331 1.531 1.578 sum -4.595 -0.284 -0.228 4.609 Atomic orbital electron populations 1.23188 0.77345 1.04725 1.01816 1.86168 1.22135 1.25671 1.88406 1.17725 0.86480 0.85863 0.99498 1.18733 0.87441 0.86872 1.07171 1.84051 1.12639 1.34688 1.76143 1.21987 0.83944 0.92588 1.08875 1.16621 0.85374 0.82222 0.76969 1.90913 1.30306 1.67475 1.49978 1.46015 1.10577 1.05637 1.74174 1.21142 0.84878 0.92600 0.97345 0.88842 1.21941 0.97474 1.01357 0.96165 1.21637 0.97013 0.95128 1.01482 1.21158 0.96509 0.96032 0.96858 0.90763 1.21558 0.96764 1.01178 0.95882 1.22276 0.85328 0.95239 0.97676 1.86473 1.38618 1.79158 1.34010 1.21509 0.96109 1.00732 0.96376 1.21815 0.98730 0.94316 1.01613 1.22691 0.94673 0.94327 1.00840 1.19399 0.92655 0.92106 1.04171 1.18337 0.92361 0.92008 1.02401 1.24780 1.04896 1.00578 0.88160 1.86623 1.76824 1.41128 1.29453 0.94982 0.79620 0.76957 0.89532 1.20526 0.93358 0.97800 0.99132 1.20953 1.00374 0.90440 1.07831 0.92005 0.87660 0.92159 0.75716 0.91126 0.91525 0.91332 0.91286 0.91064 0.91007 0.93399 0.93768 0.77246 0.90986 0.91242 0.91055 0.90857 0.81025 0.90510 0.77193 1.17763 1.18395 0.84258 0.83408 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.55 10.50 -19.62 -0.21 -0.75 16 3 C 0.15 0.34 6.70 -39.12 -0.26 0.08 16 4 C 0.05 0.17 7.35 -38.24 -0.28 -0.11 16 5 O -0.17 -0.65 10.28 2.63 0.03 -0.62 16 6 C -0.02 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.60 2.06 7.76 -12.71 -0.10 1.96 16 8 O -0.51 -3.09 16.49 5.23 0.09 -3.01 16 9 N -0.71 -0.54 5.07 -55.01 -0.28 -0.82 16 10 C 0.14 0.01 2.45 -67.93 -0.17 -0.16 16 11 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 12 C -0.13 0.00 5.49 -26.74 -0.15 -0.15 16 13 C -0.11 0.09 4.96 -26.73 -0.13 -0.04 16 14 C -0.09 0.12 2.19 -90.62 -0.20 -0.08 16 15 H 0.07 -0.11 8.14 -51.92 -0.42 -0.54 16 16 C -0.12 0.03 5.05 -26.73 -0.14 -0.11 16 17 C 0.07 -0.01 6.80 37.16 0.25 0.24 16 18 O -0.58 -0.84 13.66 -35.23 -0.48 -1.32 16 19 C -0.11 0.18 5.20 -26.73 -0.14 0.04 16 20 C -0.13 0.22 5.39 -26.73 -0.14 0.07 16 21 C -0.10 -0.35 10.68 -37.24 -0.40 -0.75 16 22 C -0.08 -0.28 6.16 -105.21 -0.65 -0.93 16 23 C -0.05 -0.10 5.29 -104.63 -0.55 -0.65 16 24 C -0.07 -0.02 2.70 36.00 0.10 0.07 16 25 O -0.53 -0.86 12.86 -35.23 -0.45 -1.31 16 26 Si 0.69 -0.85 30.20 -169.99 -5.13 -5.98 16 27 C -0.09 -0.05 8.62 -39.97 -0.34 -0.39 16 28 C -0.18 -0.03 9.03 -39.38 -0.36 -0.39 16 29 H 0.06 -0.23 7.66 -51.93 -0.40 -0.63 16 30 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 31 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 32 H 0.41 -0.32 8.32 -40.82 -0.34 -0.66 16 33 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.07 -0.07 6.56 -51.92 -0.34 -0.41 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 38 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 39 H 0.05 -0.04 6.56 -51.93 -0.34 -0.38 16 40 H 0.04 -0.04 8.14 -51.93 -0.42 -0.47 16 41 H 0.38 -1.05 9.12 45.56 0.42 -0.63 16 42 H 0.07 -0.14 8.14 -51.92 -0.42 -0.56 16 43 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 45 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.17 0.40 8.06 -52.48 -0.42 -0.02 16 47 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 48 H 0.38 -0.93 8.74 45.56 0.40 -0.53 16 49 H -0.25 -0.30 6.75 56.52 0.38 0.08 16 50 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 51 H 0.14 -0.19 4.85 -52.49 -0.25 -0.44 16 52 H 0.15 -0.41 6.26 -52.49 -0.33 -0.74 16 LS Contribution 418.68 15.07 6.31 6.31 Total: 0.00 -9.56 418.68 -10.16 -19.73 By element: Atomic # 1 Polarization: -4.42 SS G_CDS: -7.11 Total: -11.52 kcal Atomic # 6 Polarization: 2.22 SS G_CDS: -2.92 Total: -0.70 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.28 Total: -0.82 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -1.03 Total: -7.01 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.13 Total: -5.98 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -9.56 -10.16 -19.73 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_6672420.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.350 kcal (2) G-P(sol) polarization free energy of solvation -9.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.726 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.076 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds