Wall clock time and date at job start Sat Mar 6 2021 20:10:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.34230 * 126.49811 * 254.69070 * 4 2 1 6 6 N 1.36844 * 109.93683 * 179.88912 * 5 4 2 7 7 C 1.46499 * 125.06268 * 180.11800 * 6 5 4 8 8 C 1.50695 * 109.47421 * 265.30320 * 7 6 5 9 9 O 1.21288 * 119.99710 * 0.02562 * 8 7 6 10 10 N 1.34778 * 120.00382 * 180.02562 * 8 7 6 11 11 C 1.46499 * 120.00100 * 179.97438 * 10 8 7 12 12 H 1.08996 * 109.47025 * 324.99706 * 11 10 8 13 13 C 1.53003 * 109.46966 * 84.99700 * 11 10 8 14 14 C 1.53000 * 109.46825 * 179.97438 * 13 11 10 15 15 C 1.52996 * 109.47693 * 300.00412 * 14 13 11 16 16 H 1.09005 * 109.47061 * 299.99862 * 15 14 13 17 17 C 1.52999 * 109.47442 * 180.02562 * 15 14 13 18 18 C 1.52992 * 109.47233 * 64.99429 * 17 15 14 19 19 O 1.42906 * 109.47036 * 179.97438 * 18 17 15 20 20 C 1.52998 * 109.47097 * 59.99281 * 15 14 13 21 21 C 1.52991 * 109.47760 * 300.00625 * 20 15 14 22 22 C 1.37693 * 109.86960 * 0.38314 * 6 5 4 23 23 C 1.39087 * 133.51162 * 179.79565 * 22 6 5 24 24 C 1.37794 * 119.77305 * 179.97438 * 23 22 6 25 25 C 1.38787 * 120.66956 * 359.97438 * 24 23 22 26 26 C 1.36656 * 120.52472 * 0.02776 * 25 24 23 27 27 C 1.39589 * 119.76815 * 359.97438 * 26 25 24 28 28 H 0.96699 * 114.00604 * 59.99761 * 1 2 3 29 29 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 30 30 H 1.48498 * 110.00005 * 60.00258 * 3 2 1 31 31 H 1.48501 * 110.00049 * 181.31921 * 3 2 1 32 32 H 1.08003 * 125.03649 * 359.97438 * 5 4 2 33 33 H 1.08998 * 109.46966 * 25.30558 * 7 6 5 34 34 H 1.09002 * 109.46961 * 145.30176 * 7 6 5 35 35 H 0.96998 * 119.99446 * 359.97438 * 10 8 7 36 36 H 1.08992 * 109.47127 * 300.00098 * 13 11 10 37 37 H 1.09005 * 109.47077 * 60.00157 * 13 11 10 38 38 H 1.09004 * 109.46899 * 180.02562 * 14 13 11 39 39 H 1.09005 * 109.46754 * 60.00462 * 14 13 11 40 40 H 1.08997 * 109.47023 * 185.00145 * 17 15 14 41 41 H 1.09005 * 109.46696 * 304.99666 * 17 15 14 42 42 H 1.08997 * 109.47701 * 300.00301 * 18 17 15 43 43 H 1.09005 * 109.47086 * 60.00475 * 18 17 15 44 44 H 0.96697 * 114.00153 * 180.02562 * 19 18 17 45 45 H 1.08999 * 109.47292 * 179.97438 * 20 15 14 46 46 H 1.09004 * 109.46482 * 60.00863 * 20 15 14 47 47 H 1.09004 * 109.47317 * 299.99726 * 21 20 15 48 48 H 1.08994 * 109.47408 * 179.97438 * 21 20 15 49 49 H 1.07996 * 120.11542 * 359.97438 * 23 22 6 50 50 H 1.08005 * 119.66308 * 179.97438 * 24 23 22 51 51 H 1.08000 * 119.73496 * 180.02562 * 25 24 23 52 52 H 1.08007 * 120.11490 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4661 -0.1380 2.3204 6 7 2.8041 -1.0991 3.2340 7 6 3.4104 -0.8406 4.5423 8 6 4.9086 -0.9627 4.4347 9 8 5.4196 -1.2381 3.3697 10 7 5.6807 -0.7659 5.5217 11 6 7.1370 -0.8852 5.4171 12 1 7.3869 -1.6698 4.7031 13 6 7.7246 0.4446 4.9401 14 6 9.2457 0.3202 4.8315 15 6 9.8278 -0.0324 6.2017 16 1 9.5776 0.7524 6.9157 17 6 11.3490 -0.1562 6.0932 18 6 11.9474 1.2062 5.7375 19 8 13.3682 1.0907 5.6367 20 6 9.2401 -1.3620 6.6787 21 6 7.7191 -1.2377 6.7874 22 6 2.4947 -2.3458 2.7379 23 6 2.6296 -3.6363 3.2388 24 6 2.2148 -4.7107 2.4823 25 6 1.6623 -4.5191 1.2237 26 6 1.5205 -3.2598 0.7122 27 6 1.9340 -2.1570 1.4614 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5614 2.4679 1.2085 31 1 3.5345 1.7704 -0.0321 32 1 2.6075 0.9240 2.4569 33 1 3.1506 0.1657 4.8707 34 1 3.0378 -1.5663 5.2653 35 1 5.2720 -0.5453 6.3733 36 1 7.3096 0.6959 3.9641 37 1 7.4747 1.2293 5.6542 38 1 9.6644 1.2676 4.4921 39 1 9.4960 -0.4646 4.1176 40 1 11.7550 -0.4937 7.0467 41 1 11.6002 -0.8776 5.3156 42 1 11.5414 1.5437 4.7839 43 1 11.6962 1.9276 6.5151 44 1 13.8153 1.9186 5.4135 45 1 9.6552 -1.6135 7.6547 46 1 9.4905 -2.1468 5.9648 47 1 7.4688 -0.4529 7.5014 48 1 7.3005 -2.1851 7.1268 49 1 3.0580 -3.7957 4.2173 50 1 2.3208 -5.7121 2.8728 51 1 1.3419 -5.3721 0.6438 52 1 1.0901 -3.1184 -0.2682 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13461142_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:10:33 Heat of formation + Delta-G solvation = -63.640961 kcal Electronic energy + Delta-G solvation = -32203.214138 eV Core-core repulsion = 27941.088787 eV Total energy + Delta-G solvation = -4262.125351 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.193 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.49086 -41.12888 -39.69140 -37.99405 -37.81223 -37.47365 -35.78960 -34.20057 -32.91416 -31.96740 -31.32919 -30.18226 -29.37823 -28.14249 -25.68140 -24.50729 -23.87375 -23.53417 -22.58028 -21.85996 -21.62295 -20.96109 -20.42757 -18.64215 -18.35540 -18.22647 -18.17844 -17.68715 -17.08426 -16.64873 -16.35407 -16.25394 -15.95228 -15.51352 -15.41432 -15.26005 -15.11992 -14.94470 -14.78807 -14.73534 -14.55913 -14.42222 -14.01969 -13.82658 -13.66843 -13.47235 -13.41402 -13.27870 -12.96937 -12.63858 -12.46013 -12.33673 -12.29522 -12.27071 -12.08678 -11.90083 -11.84265 -11.64741 -11.48090 -11.30428 -11.03225 -10.89398 -10.42349 -10.20650 -10.10715 -9.02744 -8.53688 -4.96174 0.27129 0.79504 1.37028 1.38745 1.43168 1.60517 1.75873 2.04126 2.11108 3.09527 3.11912 3.40692 3.44545 3.51588 3.56903 3.66400 3.75381 3.80341 3.82351 3.84175 3.87518 4.02051 4.10248 4.14483 4.19379 4.28796 4.32093 4.33902 4.36579 4.40489 4.41647 4.46963 4.48259 4.61235 4.70530 4.78089 4.80426 4.86806 4.88320 4.90235 4.98710 5.00346 5.05125 5.06351 5.08503 5.22739 5.25156 5.31601 5.38523 5.64272 5.79831 5.85365 5.88980 6.14465 6.30382 6.36861 6.63619 6.80572 7.00545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.032 4.032 3 Si 0.681 3.319 4 C -0.150 4.150 5 C 0.064 3.936 6 N -0.465 5.465 7 C 0.091 3.909 8 C 0.491 3.509 9 O -0.513 6.513 10 N -0.726 5.726 11 C 0.146 3.854 12 H 0.089 0.911 13 C -0.128 4.128 14 C -0.115 4.115 15 C -0.086 4.086 16 H 0.074 0.926 17 C -0.117 4.117 18 C 0.073 3.927 19 O -0.577 6.577 20 C -0.110 4.110 21 C -0.125 4.125 22 C 0.110 3.890 23 C -0.127 4.127 24 C -0.096 4.096 25 C -0.145 4.145 26 C -0.063 4.063 27 C -0.085 4.085 28 H 0.378 0.622 29 H 0.070 0.930 30 H -0.254 1.254 31 H -0.256 1.256 32 H 0.162 0.838 33 H 0.121 0.879 34 H 0.120 0.880 35 H 0.401 0.599 36 H 0.066 0.934 37 H 0.064 0.936 38 H 0.068 0.932 39 H 0.067 0.933 40 H 0.071 0.929 41 H 0.071 0.929 42 H 0.047 0.953 43 H 0.044 0.956 44 H 0.381 0.619 45 H 0.072 0.928 46 H 0.068 0.932 47 H 0.070 0.930 48 H 0.071 0.929 49 H 0.115 0.885 50 H 0.126 0.874 51 H 0.124 0.876 52 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.795 3.598 2.601 4.510 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.144 4.144 3 Si 0.582 3.418 4 C -0.158 4.158 5 C -0.060 4.060 6 N -0.148 5.148 7 C -0.036 4.036 8 C 0.275 3.725 9 O -0.387 6.387 10 N -0.378 5.378 11 C 0.041 3.959 12 H 0.107 0.893 13 C -0.167 4.167 14 C -0.153 4.153 15 C -0.104 4.104 16 H 0.092 0.908 17 C -0.154 4.154 18 C -0.005 4.005 19 O -0.382 6.382 20 C -0.148 4.148 21 C -0.163 4.163 22 C 0.005 3.995 23 C -0.148 4.148 24 C -0.115 4.115 25 C -0.164 4.164 26 C -0.082 4.082 27 C -0.090 4.090 28 H 0.225 0.775 29 H 0.088 0.912 30 H -0.179 1.179 31 H -0.180 1.180 32 H 0.179 0.821 33 H 0.139 0.861 34 H 0.137 0.863 35 H 0.235 0.765 36 H 0.085 0.915 37 H 0.083 0.917 38 H 0.086 0.914 39 H 0.086 0.914 40 H 0.090 0.910 41 H 0.090 0.910 42 H 0.066 0.934 43 H 0.062 0.938 44 H 0.228 0.772 45 H 0.090 0.910 46 H 0.087 0.913 47 H 0.088 0.912 48 H 0.090 0.910 49 H 0.133 0.867 50 H 0.144 0.856 51 H 0.142 0.858 52 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.148 3.134 3.242 4.512 hybrid contribution 0.081 0.314 0.630 0.709 sum 0.230 3.448 3.872 5.190 Atomic orbital electron populations 1.86538 1.17679 1.81720 1.49306 1.23938 0.85121 1.09058 0.96234 0.95369 0.80983 0.77724 0.87698 1.19527 1.08652 0.91750 0.95824 1.21398 1.01730 0.93610 0.89305 1.43176 1.52646 1.04662 1.14352 1.21610 0.90890 1.05827 0.85224 1.21007 0.89422 0.77482 0.84626 1.90812 1.74667 1.45614 1.27575 1.46061 1.07395 1.72411 1.11962 1.21055 0.78155 0.98446 0.98197 0.89264 1.21910 0.95818 0.97049 1.01928 1.21637 0.94375 1.02278 0.97031 1.21143 0.93839 0.98045 0.97412 0.90796 1.21557 0.94065 0.96815 1.02985 1.22266 0.80950 0.97676 0.99591 1.86476 1.19493 1.38315 1.93935 1.21510 0.93829 0.97351 1.02131 1.21799 0.96357 1.02332 0.95827 1.18165 1.01245 0.85818 0.94246 1.19954 1.05010 0.89143 1.00670 1.20832 0.98262 0.97915 0.94489 1.20669 1.02437 0.96899 0.96428 1.20281 0.97888 0.90846 0.99158 1.18921 1.03420 0.92579 0.94040 0.77517 0.91176 1.17899 1.18030 0.82143 0.86133 0.86259 0.76472 0.91485 0.91691 0.91369 0.91382 0.91015 0.91014 0.93440 0.93773 0.77207 0.90973 0.91312 0.91172 0.91020 0.86687 0.85626 0.85791 0.85874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.99 12.86 -35.23 -0.45 -1.45 16 2 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 3 Si 0.68 0.07 30.78 -169.99 -5.23 -5.16 16 4 C -0.15 -0.73 5.61 -102.71 -0.58 -1.31 16 5 C 0.06 0.26 9.89 -16.73 -0.17 0.09 16 6 N -0.47 -1.58 2.27 -115.71 -0.26 -1.84 16 7 C 0.09 -0.07 6.48 -5.20 -0.03 -0.10 16 8 C 0.49 0.61 7.86 -10.99 -0.09 0.52 16 9 O -0.51 -3.23 16.09 5.55 0.09 -3.14 16 10 N -0.73 1.26 5.08 -53.81 -0.27 0.98 16 11 C 0.15 -0.12 2.45 -67.93 -0.17 -0.28 16 12 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 13 C -0.13 0.07 5.50 -26.73 -0.15 -0.08 16 14 C -0.12 0.10 4.96 -26.73 -0.13 -0.03 16 15 C -0.09 0.14 2.19 -90.62 -0.20 -0.05 16 16 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 17 C -0.12 0.05 5.05 -26.74 -0.14 -0.09 16 18 C 0.07 -0.02 6.80 37.15 0.25 0.23 16 19 O -0.58 -0.75 13.66 -35.23 -0.48 -1.23 16 20 C -0.11 0.22 5.20 -26.74 -0.14 0.08 16 21 C -0.13 0.32 5.39 -26.74 -0.14 0.18 16 22 C 0.11 0.55 6.80 -83.99 -0.57 -0.02 16 23 C -0.13 -0.46 10.00 -39.43 -0.39 -0.85 16 24 C -0.10 -0.28 10.01 -39.54 -0.40 -0.67 16 25 C -0.15 -0.46 9.97 -39.95 -0.40 -0.86 16 26 C -0.06 -0.28 10.05 -39.65 -0.40 -0.68 16 27 C -0.09 -0.49 6.35 -105.14 -0.67 -1.16 16 28 H 0.38 -1.32 8.74 45.56 0.40 -0.92 16 29 H 0.07 0.06 7.96 -51.93 -0.41 -0.35 16 30 H -0.25 -0.58 7.05 56.52 0.40 -0.18 16 31 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 32 H 0.16 0.33 6.30 -52.48 -0.33 0.00 16 33 H 0.12 -0.45 8.12 -51.93 -0.42 -0.87 16 34 H 0.12 -0.38 8.14 -51.93 -0.42 -0.80 16 35 H 0.40 -1.95 8.60 -40.82 -0.35 -2.30 16 36 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 37 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.07 -0.07 6.56 -51.93 -0.34 -0.42 16 39 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 42 H 0.05 -0.05 6.56 -51.93 -0.34 -0.39 16 43 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 44 H 0.38 -1.12 9.12 45.56 0.42 -0.71 16 45 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 46 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 47 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 48 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 49 H 0.12 0.18 8.06 -52.49 -0.42 -0.25 16 50 H 0.13 0.06 8.06 -52.48 -0.42 -0.36 16 51 H 0.12 0.12 8.06 -52.49 -0.42 -0.31 16 52 H 0.12 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 417.99 15.07 6.30 6.30 Total: 0.00 -12.16 417.99 -12.45 -24.61 By element: Atomic # 1 Polarization: -6.29 SS G_CDS: -7.74 Total: -14.03 kcal Atomic # 6 Polarization: -0.65 SS G_CDS: -4.39 Total: -5.04 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -0.54 Total: -0.86 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -0.84 Total: -5.82 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.23 Total: -5.16 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -12.16 -12.45 -24.61 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13461142_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.033 kcal (2) G-P(sol) polarization free energy of solvation -12.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.446 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.608 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds