Wall clock time and date at job start Sun Mar 7 2021 00:28:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47099 * 2 1 4 4 C 1.50699 * 109.46842 * 240.00496 * 2 1 3 5 5 C 1.35454 * 126.06932 * 120.02052 * 4 2 1 6 6 N 1.35531 * 108.86965 * 179.97438 * 5 4 2 7 7 C 1.37647 * 108.64639 * 0.02562 * 6 5 4 8 8 C 1.46687 * 126.23383 * 179.97438 * 7 6 5 9 9 O 1.21690 * 120.00153 * 180.02562 * 8 7 6 10 10 N 1.34780 * 119.99686 * 0.02562 * 8 7 6 11 11 C 1.46498 * 119.99846 * 180.02562 * 10 8 7 12 12 H 1.08999 * 109.47009 * 325.00163 * 11 10 8 13 13 C 1.53003 * 109.47046 * 84.99656 * 11 10 8 14 14 C 1.53002 * 109.46883 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.46933 * 300.00072 * 14 13 11 16 16 H 1.08999 * 109.47502 * 300.00233 * 15 14 13 17 17 C 1.50706 * 109.47001 * 180.02562 * 15 14 13 18 18 N 1.29902 * 124.85120 * 120.00404 * 17 15 14 19 19 C 1.36066 * 108.80423 * 180.02562 * 18 17 15 20 20 C 1.39547 * 133.81372 * 180.36349 * 19 18 17 21 21 C 1.37723 * 119.72705 * 180.14025 * 20 19 18 22 22 C 1.38677 * 120.42015 * 359.44561 * 21 20 19 23 23 C 1.37942 * 120.47609 * 0.28682 * 22 21 20 24 24 C 1.38622 * 119.87978 * 359.97438 * 23 22 21 25 25 O 1.34232 * 124.85246 * 299.99950 * 17 15 14 26 26 C 1.53003 * 109.47395 * 60.00242 * 15 14 13 27 27 C 1.52997 * 109.47213 * 205.00149 * 11 10 8 28 28 C 1.37869 * 107.53411 * 0.25846 * 7 6 5 29 29 H 0.96702 * 114.00672 * 59.99296 * 1 2 3 30 30 H 1.08998 * 109.47373 * 120.00056 * 2 1 3 31 31 H 1.48501 * 109.99940 * 60.00191 * 3 2 1 32 32 H 1.48497 * 110.00330 * 181.32033 * 3 2 1 33 33 H 1.07994 * 125.56446 * 0.02562 * 5 4 2 34 34 H 0.97002 * 125.67532 * 179.97438 * 6 5 4 35 35 H 0.96999 * 119.99906 * 359.97438 * 10 8 7 36 36 H 1.08994 * 109.47093 * 300.00123 * 13 11 10 37 37 H 1.08999 * 109.46803 * 60.00381 * 13 11 10 38 38 H 1.08994 * 109.47198 * 180.02562 * 14 13 11 39 39 H 1.08999 * 109.47220 * 59.99921 * 14 13 11 40 40 H 1.07996 * 120.13948 * 359.86014 * 20 19 18 41 41 H 1.08002 * 119.79166 * 179.73263 * 21 20 19 42 42 H 1.08006 * 119.76118 * 180.29565 * 22 21 20 43 43 H 1.08010 * 120.06254 * 179.97438 * 23 22 21 44 44 H 1.08999 * 109.46803 * 59.99563 * 26 15 14 45 45 H 1.09002 * 109.47396 * 179.97438 * 26 15 14 46 46 H 1.09002 * 109.47300 * 59.99734 * 27 11 10 47 47 H 1.08999 * 109.46687 * 299.99655 * 27 11 10 48 48 H 1.07997 * 126.45624 * 179.73832 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7135 -0.1739 -2.1976 6 7 2.9564 -1.1183 -3.1389 7 6 2.3188 -2.2811 -2.7704 8 6 2.3255 -3.5463 -3.5128 9 8 1.7191 -4.5087 -3.0804 10 7 3.0033 -3.6428 -4.6737 11 6 3.0095 -4.9061 -5.4154 12 1 3.0052 -5.7397 -4.7132 13 6 1.7665 -4.9817 -6.3044 14 6 1.7727 -6.3014 -7.0785 15 6 3.0282 -6.3756 -7.9498 16 1 3.0327 -5.5423 -8.6523 17 6 3.0340 -7.6753 -8.7128 18 7 3.0433 -7.7757 -10.0079 19 6 3.0455 -9.0938 -10.3456 20 6 3.0606 -9.7797 -11.5607 21 6 3.0554 -11.1569 -11.5676 22 6 3.0469 -11.8650 -10.3753 23 6 3.0376 -11.2001 -9.1668 24 6 3.0372 -9.8141 -9.1411 25 8 3.0305 -8.8945 -8.1513 26 6 4.2712 -6.3000 -7.0609 27 6 4.2650 -4.9798 -6.2867 28 6 1.6673 -2.0384 -1.5799 29 1 -0.3934 0.4418 -0.7650 30 1 1.7924 -0.5138 0.8899 31 1 1.5615 2.4678 1.2085 32 1 3.5345 1.7703 -0.0322 33 1 3.0839 0.8404 -2.2151 34 1 3.4902 -0.9949 -3.9394 35 1 3.4863 -2.8755 -5.0185 36 1 0.8722 -4.9293 -5.6836 37 1 1.7708 -4.1481 -7.0066 38 1 0.8875 -6.3552 -7.7121 39 1 1.7683 -7.1348 -6.3760 40 1 3.0716 -9.2330 -12.4920 41 1 3.0626 -11.6889 -12.5075 42 1 3.0477 -12.9450 -10.3931 43 1 3.0306 -11.7583 -8.2421 44 1 4.2667 -7.1334 -6.3583 45 1 5.1656 -6.3533 -7.6816 46 1 5.1505 -4.9259 -5.6534 47 1 4.2692 -4.1462 -6.9890 48 1 1.0685 -2.7422 -1.0209 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13774298_10543058.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:28:09 Heat of formation + Delta-G solvation = 12.322147 kcal Electronic energy + Delta-G solvation = -31640.167584 eV Core-core repulsion = 27242.307147 eV Total energy + Delta-G solvation = -4397.860438 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.157 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -44.24792 -42.51367 -40.84834 -39.36557 -38.73470 -37.62709 -35.94535 -35.37622 -32.78317 -32.08750 -31.95731 -31.63416 -30.68254 -29.51602 -26.60859 -25.36594 -24.17045 -24.05431 -23.78122 -22.88134 -22.16176 -21.43583 -21.09681 -20.70166 -19.92644 -18.88583 -18.21780 -17.69148 -17.64371 -17.30003 -17.07228 -16.86790 -16.44631 -15.97502 -15.69346 -15.53894 -15.38974 -15.36459 -15.07643 -14.88058 -14.78624 -14.56365 -14.44065 -14.08797 -13.93774 -13.86136 -13.49793 -13.47283 -13.40551 -13.25270 -12.61090 -12.55891 -12.48687 -12.41170 -12.32455 -12.23049 -11.95455 -11.73682 -11.52732 -11.43498 -11.11656 -10.39243 -10.24432 -9.93962 -9.79934 -9.43697 -9.32222 -5.05197 -0.31190 0.23443 0.39227 1.32978 1.41384 1.47186 1.49386 1.64422 1.88770 1.98485 2.01985 2.36141 2.64034 2.66145 3.36966 3.43455 3.52007 3.59234 3.67946 3.70752 3.79713 3.87326 3.92918 3.96663 4.01415 4.09874 4.13196 4.18770 4.19224 4.22769 4.27341 4.36373 4.38065 4.44929 4.59147 4.67420 4.77441 4.80658 4.86294 4.89463 4.89613 4.95528 5.03322 5.04602 5.08830 5.14414 5.21582 5.30531 5.33049 5.35481 5.57677 5.63893 5.78161 6.17899 6.38662 6.63903 6.71294 7.10476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.033 4.033 3 Si 0.687 3.313 4 C -0.211 4.211 5 C 0.034 3.966 6 N -0.535 5.535 7 C -0.059 4.059 8 C 0.591 3.409 9 O -0.522 6.522 10 N -0.730 5.730 11 C 0.144 3.856 12 H 0.095 0.905 13 C -0.127 4.127 14 C -0.113 4.113 15 C 0.003 3.997 16 H 0.119 0.881 17 C 0.257 3.743 18 N -0.478 5.478 19 C 0.020 3.980 20 C -0.062 4.062 21 C -0.119 4.119 22 C -0.092 4.092 23 C -0.093 4.093 24 C 0.007 3.993 25 O -0.210 6.210 26 C -0.112 4.112 27 C -0.124 4.124 28 C -0.075 4.075 29 H 0.377 0.623 30 H 0.111 0.889 31 H -0.256 1.256 32 H -0.258 1.258 33 H 0.176 0.824 34 H 0.418 0.582 35 H 0.394 0.606 36 H 0.079 0.921 37 H 0.070 0.930 38 H 0.076 0.924 39 H 0.077 0.923 40 H 0.137 0.863 41 H 0.139 0.861 42 H 0.142 0.858 43 H 0.136 0.864 44 H 0.078 0.922 45 H 0.079 0.921 46 H 0.079 0.921 47 H 0.075 0.925 48 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.012 3.483 -4.461 6.411 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.145 4.145 3 Si 0.589 3.411 4 C -0.218 4.218 5 C -0.102 4.102 6 N -0.131 5.131 7 C -0.172 4.172 8 C 0.379 3.621 9 O -0.397 6.397 10 N -0.380 5.380 11 C 0.039 3.961 12 H 0.113 0.887 13 C -0.166 4.166 14 C -0.152 4.152 15 C -0.016 4.016 16 H 0.137 0.863 17 C 0.045 3.955 18 N -0.207 5.207 19 C -0.091 4.091 20 C -0.081 4.081 21 C -0.138 4.138 22 C -0.110 4.110 23 C -0.112 4.112 24 C -0.043 4.043 25 O -0.101 6.101 26 C -0.151 4.151 27 C -0.162 4.162 28 C -0.101 4.101 29 H 0.224 0.776 30 H 0.128 0.872 31 H -0.181 1.181 32 H -0.183 1.183 33 H 0.193 0.807 34 H 0.255 0.745 35 H 0.227 0.773 36 H 0.097 0.903 37 H 0.089 0.911 38 H 0.095 0.905 39 H 0.096 0.904 40 H 0.154 0.846 41 H 0.157 0.843 42 H 0.160 0.840 43 H 0.154 0.846 44 H 0.097 0.903 45 H 0.097 0.903 46 H 0.097 0.903 47 H 0.093 0.907 48 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.231 3.505 -3.739 6.059 hybrid contribution 0.644 -0.717 -0.023 0.964 sum 3.875 2.788 -3.762 6.078 Atomic orbital electron populations 1.86501 1.17425 1.81727 1.49049 1.24370 0.84787 1.09016 0.96326 0.95144 0.80346 0.77837 0.87763 1.19910 1.06380 0.95952 0.99573 1.21871 1.02807 0.94928 0.90612 1.41917 1.40705 1.09715 1.20801 1.20421 1.08389 0.87544 1.00807 1.17049 0.78835 0.86276 0.79933 1.90885 1.43337 1.37307 1.68164 1.45929 1.53771 1.14945 1.23402 1.21076 0.94847 0.86737 0.93392 0.88671 1.21911 0.98851 0.97246 0.98552 1.21598 0.96252 0.98889 0.98458 1.20034 0.97623 0.87637 0.96315 0.86296 1.26368 0.94862 0.86418 0.87805 1.70654 1.20235 1.18202 1.11601 1.19906 1.05627 0.88709 0.94907 1.20371 0.98578 0.93629 0.95512 1.21113 1.00530 0.93205 0.98962 1.21085 0.98486 1.00533 0.90943 1.19940 1.03296 0.88072 0.99866 1.20362 1.05445 0.92169 0.86337 1.84483 1.74310 1.15482 1.35826 1.21580 0.96683 0.98399 0.98417 1.21796 0.97582 0.98111 0.98708 1.21221 0.99188 0.95725 0.93979 0.77556 0.87156 1.18055 1.18267 0.80750 0.74456 0.77262 0.90282 0.91098 0.90482 0.90393 0.84551 0.84311 0.84005 0.84579 0.90316 0.90280 0.90277 0.90664 0.83201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.43 12.88 -35.23 -0.45 -0.88 16 2 C -0.03 0.01 3.02 36.01 0.11 0.11 16 3 Si 0.69 -1.30 30.59 -169.99 -5.20 -6.50 16 4 C -0.21 0.02 5.44 -105.02 -0.57 -0.56 16 5 C 0.03 -0.09 10.45 -16.91 -0.18 -0.26 16 6 N -0.54 1.59 5.99 -9.39 -0.06 1.53 16 7 C -0.06 -0.03 7.06 -81.98 -0.58 -0.61 16 8 C 0.59 0.95 7.75 -12.85 -0.10 0.86 16 9 O -0.52 -3.03 16.54 5.20 0.09 -2.94 16 10 N -0.73 1.47 5.07 -55.11 -0.28 1.19 16 11 C 0.14 -0.25 2.45 -67.93 -0.17 -0.42 16 12 H 0.10 0.04 7.58 -51.93 -0.39 -0.35 16 13 C -0.13 0.20 5.49 -26.73 -0.15 0.05 16 14 C -0.11 0.12 5.19 -26.73 -0.14 -0.02 16 15 C 0.00 0.00 2.66 -91.77 -0.24 -0.25 16 16 H 0.12 -0.23 8.14 -51.93 -0.42 -0.65 16 17 C 0.26 0.66 6.74 -13.09 -0.09 0.57 16 18 N -0.48 -2.16 11.34 -8.70 -0.10 -2.26 16 19 C 0.02 0.08 7.24 -84.71 -0.61 -0.53 16 20 C -0.06 -0.12 10.10 -39.28 -0.40 -0.52 16 21 C -0.12 0.01 10.02 -39.61 -0.40 -0.39 16 22 C -0.09 0.03 10.02 -39.53 -0.40 -0.37 16 23 C -0.09 -0.12 10.06 -39.55 -0.40 -0.52 16 24 C 0.01 0.03 7.43 -38.65 -0.29 -0.26 16 25 O -0.21 -0.75 10.77 3.62 0.04 -0.71 16 26 C -0.11 0.25 5.19 -26.71 -0.14 0.11 16 27 C -0.12 0.45 5.39 -26.71 -0.14 0.31 16 28 C -0.07 -0.15 10.59 -39.12 -0.41 -0.56 16 29 H 0.38 -1.21 8.70 45.56 0.40 -0.81 16 30 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 31 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 32 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 33 H 0.18 -0.96 6.19 -52.49 -0.32 -1.28 16 34 H 0.42 -2.68 8.19 -40.82 -0.33 -3.02 16 35 H 0.39 -2.01 7.73 -40.82 -0.32 -2.33 16 36 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.14 0.06 8.06 -52.49 -0.42 -0.36 16 41 H 0.14 -0.37 8.06 -52.49 -0.42 -0.79 16 42 H 0.14 -0.43 8.06 -52.48 -0.42 -0.85 16 43 H 0.14 -0.09 8.06 -52.48 -0.42 -0.51 16 44 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 45 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 46 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 47 H 0.07 -0.37 8.14 -51.93 -0.42 -0.79 16 48 H 0.15 0.47 8.06 -52.49 -0.42 0.05 16 LS Contribution 399.59 15.07 6.02 6.02 Total: 0.00 -11.55 399.59 -11.73 -23.28 By element: Atomic # 1 Polarization: -8.99 SS G_CDS: -6.50 Total: -15.49 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -5.29 Total: -3.25 kcal Atomic # 7 Polarization: 0.90 SS G_CDS: -0.43 Total: 0.47 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -0.33 Total: -4.53 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.20 Total: -6.50 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -11.55 -11.73 -23.28 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13774298_10543058.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.600 kcal (2) G-P(sol) polarization free energy of solvation -11.550 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.728 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.278 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds