Wall clock time and date at job start Sun Mar 7 2021 00:28:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47099 * 2 1 4 4 C 1.50699 * 109.46842 * 240.00496 * 2 1 3 5 5 C 1.35454 * 126.06932 * 120.02052 * 4 2 1 6 6 N 1.35531 * 108.86965 * 179.97438 * 5 4 2 7 7 C 1.37647 * 108.64639 * 0.02562 * 6 5 4 8 8 C 1.46687 * 126.23383 * 179.97438 * 7 6 5 9 9 O 1.21690 * 120.00153 * 180.02562 * 8 7 6 10 10 N 1.34780 * 119.99686 * 0.02562 * 8 7 6 11 11 C 1.46498 * 119.99846 * 180.02562 * 10 8 7 12 12 H 1.08999 * 109.47009 * 325.00163 * 11 10 8 13 13 C 1.53003 * 109.47046 * 84.99656 * 11 10 8 14 14 C 1.53002 * 109.46883 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.46933 * 300.00072 * 14 13 11 16 16 H 1.08999 * 109.47502 * 300.00233 * 15 14 13 17 17 C 1.50706 * 109.47001 * 180.02562 * 15 14 13 18 18 N 1.29902 * 124.85120 * 120.00404 * 17 15 14 19 19 C 1.36066 * 108.80423 * 180.02562 * 18 17 15 20 20 C 1.39547 * 133.81372 * 180.36349 * 19 18 17 21 21 C 1.37723 * 119.72705 * 180.14025 * 20 19 18 22 22 C 1.38677 * 120.42015 * 359.44561 * 21 20 19 23 23 C 1.37942 * 120.47609 * 0.28682 * 22 21 20 24 24 C 1.38622 * 119.87978 * 359.97438 * 23 22 21 25 25 O 1.34232 * 124.85246 * 299.99950 * 17 15 14 26 26 C 1.53003 * 109.47395 * 60.00242 * 15 14 13 27 27 C 1.52997 * 109.47213 * 205.00149 * 11 10 8 28 28 C 1.37869 * 107.53411 * 0.25846 * 7 6 5 29 29 H 0.96702 * 114.00672 * 59.99296 * 1 2 3 30 30 H 1.08998 * 109.47373 * 120.00056 * 2 1 3 31 31 H 1.48501 * 109.99940 * 60.00191 * 3 2 1 32 32 H 1.48497 * 110.00330 * 181.32033 * 3 2 1 33 33 H 1.07994 * 125.56446 * 0.02562 * 5 4 2 34 34 H 0.97002 * 125.67532 * 179.97438 * 6 5 4 35 35 H 0.96999 * 119.99906 * 359.97438 * 10 8 7 36 36 H 1.08994 * 109.47093 * 300.00123 * 13 11 10 37 37 H 1.08999 * 109.46803 * 60.00381 * 13 11 10 38 38 H 1.08994 * 109.47198 * 180.02562 * 14 13 11 39 39 H 1.08999 * 109.47220 * 59.99921 * 14 13 11 40 40 H 1.07996 * 120.13948 * 359.86014 * 20 19 18 41 41 H 1.08002 * 119.79166 * 179.73263 * 21 20 19 42 42 H 1.08006 * 119.76118 * 180.29565 * 22 21 20 43 43 H 1.08010 * 120.06254 * 179.97438 * 23 22 21 44 44 H 1.08999 * 109.46803 * 59.99563 * 26 15 14 45 45 H 1.09002 * 109.47396 * 179.97438 * 26 15 14 46 46 H 1.09002 * 109.47300 * 59.99734 * 27 11 10 47 47 H 1.08999 * 109.46687 * 299.99655 * 27 11 10 48 48 H 1.07997 * 126.45624 * 179.73832 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7135 -0.1739 -2.1976 6 7 2.9564 -1.1183 -3.1389 7 6 2.3188 -2.2811 -2.7704 8 6 2.3255 -3.5463 -3.5128 9 8 1.7191 -4.5087 -3.0804 10 7 3.0033 -3.6428 -4.6737 11 6 3.0095 -4.9061 -5.4154 12 1 3.0052 -5.7397 -4.7132 13 6 1.7665 -4.9817 -6.3044 14 6 1.7727 -6.3014 -7.0785 15 6 3.0282 -6.3756 -7.9498 16 1 3.0327 -5.5423 -8.6523 17 6 3.0340 -7.6753 -8.7128 18 7 3.0433 -7.7757 -10.0079 19 6 3.0455 -9.0938 -10.3456 20 6 3.0606 -9.7797 -11.5607 21 6 3.0554 -11.1569 -11.5676 22 6 3.0469 -11.8650 -10.3753 23 6 3.0376 -11.2001 -9.1668 24 6 3.0372 -9.8141 -9.1411 25 8 3.0305 -8.8945 -8.1513 26 6 4.2712 -6.3000 -7.0609 27 6 4.2650 -4.9798 -6.2867 28 6 1.6673 -2.0384 -1.5799 29 1 -0.3934 0.4418 -0.7650 30 1 1.7924 -0.5138 0.8899 31 1 1.5615 2.4678 1.2085 32 1 3.5345 1.7703 -0.0322 33 1 3.0839 0.8404 -2.2151 34 1 3.4902 -0.9949 -3.9394 35 1 3.4863 -2.8755 -5.0185 36 1 0.8722 -4.9293 -5.6836 37 1 1.7708 -4.1481 -7.0066 38 1 0.8875 -6.3552 -7.7121 39 1 1.7683 -7.1348 -6.3760 40 1 3.0716 -9.2330 -12.4920 41 1 3.0626 -11.6889 -12.5075 42 1 3.0477 -12.9450 -10.3931 43 1 3.0306 -11.7583 -8.2421 44 1 4.2667 -7.1334 -6.3583 45 1 5.1656 -6.3533 -7.6816 46 1 5.1505 -4.9259 -5.6534 47 1 4.2692 -4.1462 -6.9890 48 1 1.0685 -2.7422 -1.0209 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13774298_10543058.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:28:08 Heat of formation + Delta-G solvation = 7.925451 kcal Electronic energy + Delta-G solvation = -31640.358239 eV Core-core repulsion = 27242.307147 eV Total energy + Delta-G solvation = -4398.051093 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.157 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -44.39033 -42.47100 -40.83956 -39.41867 -38.78284 -37.62990 -36.07093 -35.46405 -32.74931 -31.96663 -31.96517 -31.69292 -30.68808 -29.53080 -26.59193 -25.35999 -24.26185 -23.99623 -23.75930 -22.97661 -22.19446 -21.41639 -21.05870 -20.65328 -19.86753 -18.94787 -18.31121 -17.83857 -17.65890 -17.32473 -17.06865 -16.80747 -16.47153 -15.96144 -15.72026 -15.52628 -15.33949 -15.28175 -15.12113 -14.89070 -14.83344 -14.54145 -14.42907 -14.06180 -13.93593 -13.86029 -13.54807 -13.44639 -13.35207 -13.21252 -12.63113 -12.56824 -12.51300 -12.39777 -12.25338 -12.23768 -11.95217 -11.63911 -11.59514 -11.47619 -11.25904 -10.35946 -10.26709 -9.91032 -9.88887 -9.53944 -9.26633 -4.91366 -0.39876 0.13994 0.37561 1.28115 1.38861 1.41544 1.55516 1.74204 1.91940 2.10526 2.15889 2.27261 2.57832 2.59169 3.40475 3.48930 3.54529 3.67815 3.72258 3.79706 3.85781 3.99607 4.02531 4.05254 4.08946 4.19187 4.19454 4.23072 4.24984 4.28479 4.36238 4.38939 4.40804 4.53648 4.66634 4.70981 4.84542 4.86200 4.93165 4.95485 4.97619 5.00898 5.03823 5.04434 5.14472 5.18724 5.21666 5.27291 5.32335 5.39344 5.59989 5.64502 5.74575 6.37863 6.47329 6.55573 6.91080 7.08371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.567 6.567 2 C -0.054 4.054 3 Si 0.802 3.198 4 C -0.229 4.229 5 C 0.060 3.940 6 N -0.513 5.513 7 C -0.069 4.069 8 C 0.589 3.411 9 O -0.576 6.576 10 N -0.708 5.708 11 C 0.144 3.856 12 H 0.068 0.932 13 C -0.119 4.119 14 C -0.107 4.107 15 C 0.009 3.991 16 H 0.134 0.866 17 C 0.255 3.745 18 N -0.506 5.506 19 C -0.011 4.011 20 C -0.080 4.080 21 C -0.111 4.111 22 C -0.086 4.086 23 C -0.104 4.104 24 C -0.021 4.021 25 O -0.223 6.223 26 C -0.108 4.108 27 C -0.112 4.112 28 C -0.107 4.107 29 H 0.393 0.607 30 H 0.090 0.910 31 H -0.311 1.311 32 H -0.271 1.271 33 H 0.216 0.784 34 H 0.438 0.562 35 H 0.413 0.587 36 H 0.055 0.945 37 H 0.092 0.908 38 H 0.071 0.929 39 H 0.062 0.938 40 H 0.145 0.855 41 H 0.170 0.830 42 H 0.175 0.825 43 H 0.151 0.849 44 H 0.066 0.934 45 H 0.084 0.916 46 H 0.088 0.912 47 H 0.102 0.898 48 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.740 4.930 -6.513 9.444 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.163 4.163 3 Si 0.707 3.293 4 C -0.235 4.235 5 C -0.078 4.078 6 N -0.111 5.111 7 C -0.182 4.182 8 C 0.378 3.622 9 O -0.455 6.455 10 N -0.360 5.360 11 C 0.040 3.960 12 H 0.086 0.914 13 C -0.157 4.157 14 C -0.146 4.146 15 C -0.010 4.010 16 H 0.152 0.848 17 C 0.043 3.957 18 N -0.235 5.235 19 C -0.121 4.121 20 C -0.099 4.099 21 C -0.130 4.130 22 C -0.104 4.104 23 C -0.123 4.123 24 C -0.071 4.071 25 O -0.115 6.115 26 C -0.147 4.147 27 C -0.149 4.149 28 C -0.134 4.134 29 H 0.243 0.757 30 H 0.107 0.893 31 H -0.240 1.240 32 H -0.197 1.197 33 H 0.232 0.768 34 H 0.280 0.720 35 H 0.251 0.749 36 H 0.073 0.927 37 H 0.110 0.890 38 H 0.090 0.910 39 H 0.081 0.919 40 H 0.162 0.838 41 H 0.187 0.813 42 H 0.193 0.807 43 H 0.168 0.832 44 H 0.084 0.916 45 H 0.102 0.898 46 H 0.107 0.893 47 H 0.120 0.880 48 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 4.991 4.944 -5.878 9.160 hybrid contribution 0.056 -1.258 0.641 1.413 sum 5.047 3.686 -5.236 8.153 Atomic orbital electron populations 1.86452 1.18298 1.82390 1.50304 1.24755 0.84469 1.11318 0.95743 0.93891 0.77327 0.73205 0.84881 1.19956 1.07774 0.95219 1.00580 1.22367 1.00438 0.95997 0.88989 1.41840 1.39704 1.08220 1.21291 1.20118 1.09255 0.88267 1.00530 1.17252 0.78443 0.85995 0.80552 1.90857 1.45831 1.39152 1.69678 1.45721 1.52583 1.15576 1.22074 1.21041 0.95973 0.85980 0.93048 0.91409 1.21819 0.97911 0.97564 0.98426 1.21508 0.96280 0.98748 0.98074 1.20191 0.97950 0.86477 0.96400 0.84776 1.27027 0.93893 0.87016 0.87759 1.70612 1.21570 1.18780 1.12519 1.20317 1.06897 0.88910 0.96005 1.20677 0.99298 0.94742 0.95164 1.21532 0.98576 0.92486 1.00437 1.21544 0.96567 1.02120 0.90126 1.20334 1.03252 0.87333 1.01394 1.20818 1.06829 0.93150 0.86295 1.84464 1.74670 1.16018 1.36317 1.21552 0.96134 0.98932 0.98064 1.21734 0.96486 0.98071 0.98655 1.21199 1.00339 0.96722 0.95140 0.75717 0.89258 1.23953 1.19736 0.76776 0.72001 0.74949 0.92658 0.88953 0.91005 0.91925 0.83767 0.81274 0.80740 0.83160 0.91566 0.89766 0.89299 0.87997 0.86151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.74 12.88 -148.98 -1.92 -3.66 16 2 C -0.05 -0.03 3.02 71.24 0.22 0.18 16 3 Si 0.80 -3.86 30.59 68.60 2.10 -1.77 16 4 C -0.23 -0.04 5.44 -20.12 -0.11 -0.15 16 5 C 0.06 -0.44 10.45 83.48 0.87 0.44 16 6 N -0.51 3.99 5.99 -183.62 -1.10 2.89 16 7 C -0.07 -0.12 7.06 40.35 0.28 0.16 16 8 C 0.59 2.76 7.75 86.45 0.67 3.43 16 9 O -0.58 -8.65 16.54 -4.32 -0.07 -8.72 16 10 N -0.71 3.01 5.07 -446.49 -2.27 0.74 16 11 C 0.14 -0.42 2.45 44.99 0.11 -0.31 16 12 H 0.07 0.22 7.58 -2.39 -0.02 0.20 16 13 C -0.12 0.27 5.49 30.60 0.17 0.43 16 14 C -0.11 0.05 5.19 30.59 0.16 0.21 16 15 C 0.01 -0.01 2.66 -11.54 -0.03 -0.04 16 16 H 0.13 -0.58 8.14 -2.39 -0.02 -0.60 16 17 C 0.25 1.75 6.74 88.40 0.60 2.35 16 18 N -0.51 -5.44 11.34 -296.26 -3.36 -8.80 16 19 C -0.01 -0.11 7.24 39.32 0.28 0.18 16 20 C -0.08 -0.36 10.10 22.46 0.23 -0.13 16 21 C -0.11 0.12 10.02 22.25 0.22 0.35 16 22 C -0.09 0.14 10.02 22.30 0.22 0.37 16 23 C -0.10 -0.32 10.06 22.29 0.22 -0.09 16 24 C -0.02 -0.19 7.43 22.88 0.17 -0.02 16 25 O -0.22 -2.12 10.77 -9.96 -0.11 -2.23 16 26 C -0.11 0.46 5.19 30.61 0.16 0.62 16 27 C -0.11 0.94 5.39 30.61 0.17 1.11 16 28 C -0.11 -0.66 10.59 22.57 0.24 -0.43 16 29 H 0.39 -2.24 8.70 -74.06 -0.64 -2.88 16 30 H 0.09 0.34 7.96 -2.39 -0.02 0.32 16 31 H -0.31 -1.39 7.11 99.48 0.71 -0.68 16 32 H -0.27 0.66 7.11 99.48 0.71 1.36 16 33 H 0.22 -3.29 6.19 -2.91 -0.02 -3.31 16 34 H 0.44 -7.04 8.19 -92.71 -0.76 -7.80 16 35 H 0.41 -5.08 7.73 -92.71 -0.72 -5.80 16 36 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 37 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 38 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 39 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 40 H 0.14 0.23 8.06 -2.91 -0.02 0.21 16 41 H 0.17 -1.30 8.06 -2.91 -0.02 -1.32 16 42 H 0.18 -1.51 8.06 -2.91 -0.02 -1.53 16 43 H 0.15 -0.14 8.06 -2.91 -0.02 -0.16 16 44 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 45 H 0.08 -0.40 8.14 -2.39 -0.02 -0.41 16 46 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 47 H 0.10 -1.32 8.14 -2.39 -0.02 -1.34 16 48 H 0.12 1.34 8.06 -2.91 -0.02 1.32 16 Total: 0.00 -33.66 399.59 -2.93 -36.59 By element: Atomic # 1 Polarization: -22.64 SS G_CDS: -1.05 Total: -23.69 kcal Atomic # 6 Polarization: 3.79 SS G_CDS: 4.85 Total: 8.64 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -6.72 Total: -5.16 kcal Atomic # 8 Polarization: -12.52 SS G_CDS: -2.10 Total: -14.61 kcal Atomic # 14 Polarization: -3.86 SS G_CDS: 2.10 Total: -1.77 kcal Total: -33.66 -2.93 -36.59 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13774298_10543058.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.515 kcal (2) G-P(sol) polarization free energy of solvation -33.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.852 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.589 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.925 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds