Wall clock time and date at job start Sun Mar 7 2021 00:29:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.47085 * 2 1 4 4 C 1.50701 * 109.47151 * 119.99798 * 2 1 3 5 5 C 1.38186 * 119.84348 * 255.25302 * 4 2 1 6 6 C 1.38315 * 120.14706 * 180.29707 * 5 4 2 7 7 F 1.35103 * 120.08907 * 179.70505 * 6 5 4 8 8 C 1.39806 * 119.82775 * 359.72646 * 6 5 4 9 9 C 1.47698 * 120.15331 * 180.02562 * 8 6 5 10 10 O 1.21570 * 119.99835 * 359.97438 * 9 8 6 11 11 N 1.34777 * 119.99959 * 179.97438 * 9 8 6 12 12 C 1.46496 * 119.99998 * 179.97438 * 11 9 8 13 13 H 1.09003 * 109.47186 * 325.00406 * 12 11 9 14 14 C 1.53000 * 109.47011 * 85.00251 * 12 11 9 15 15 C 1.52996 * 109.47142 * 180.02562 * 14 12 11 16 16 C 1.53004 * 109.47413 * 299.99937 * 15 14 12 17 17 H 1.09008 * 109.46334 * 300.00287 * 16 15 14 18 18 C 1.50700 * 109.47167 * 180.02562 * 16 15 14 19 19 N 1.29898 * 124.85067 * 299.69173 * 18 16 15 20 20 C 1.36059 * 108.79889 * 179.84093 * 19 18 16 21 21 C 1.39550 * 133.80962 * 180.09311 * 20 19 18 22 22 C 1.37725 * 119.73297 * 180.35681 * 21 20 19 23 23 C 1.38684 * 120.41664 * 359.97438 * 22 21 20 24 24 C 1.37943 * 120.47840 * 0.02562 * 23 22 21 25 25 C 1.38635 * 119.87374 * 0.02562 * 24 23 22 26 26 O 1.34236 * 124.85042 * 120.00090 * 18 16 15 27 27 C 1.53000 * 109.46915 * 59.99924 * 16 15 14 28 28 C 1.52997 * 109.47314 * 205.00287 * 12 11 9 29 29 C 1.39657 * 119.69431 * 359.97438 * 8 6 5 30 30 C 1.38067 * 119.84801 * 0.02562 * 29 8 6 31 31 F 1.35104 * 119.91709 * 180.02562 * 30 29 8 32 32 H 0.96698 * 114.00000 * 60.00095 * 1 2 3 33 33 H 1.08994 * 109.47347 * 239.99655 * 2 1 3 34 34 H 1.48504 * 110.00035 * 298.68025 * 3 2 1 35 35 H 1.48493 * 110.00497 * 59.99990 * 3 2 1 36 36 H 1.08002 * 119.93020 * 0.02845 * 5 4 2 37 37 H 0.96996 * 120.00122 * 0.02562 * 11 9 8 38 38 H 1.09001 * 109.46922 * 299.99839 * 14 12 11 39 39 H 1.08995 * 109.47306 * 60.00038 * 14 12 11 40 40 H 1.09002 * 109.47078 * 179.97438 * 15 14 12 41 41 H 1.09002 * 109.47701 * 59.99906 * 15 14 12 42 42 H 1.08001 * 120.13772 * 0.37774 * 21 20 19 43 43 H 1.07993 * 119.79153 * 179.97438 * 22 21 20 44 44 H 1.08002 * 119.75492 * 179.97438 * 23 22 21 45 45 H 1.07994 * 120.06323 * 179.97438 * 24 23 22 46 46 H 1.09001 * 109.46922 * 180.02562 * 27 16 15 47 47 H 1.08995 * 109.47306 * 60.00303 * 27 16 15 48 48 H 1.09003 * 109.47091 * 300.00178 * 28 12 11 49 49 H 1.09002 * 109.47177 * 60.00062 * 28 12 11 50 50 H 1.07995 * 120.07495 * 180.02562 * 29 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4482 0.0202 2.2834 6 6 2.9167 -0.6257 3.4132 7 9 3.4272 0.0894 4.4395 8 6 2.8609 -2.0205 3.4903 9 6 3.3585 -2.7176 4.6936 10 8 3.8185 -2.0783 5.6197 11 7 3.3028 -4.0623 4.7648 12 6 3.7969 -4.7537 5.9581 13 1 4.6598 -4.2198 6.3562 14 6 2.6923 -4.7984 7.0157 15 6 3.2086 -5.5199 8.2622 16 6 3.6186 -6.9469 7.8925 17 1 2.7558 -7.4811 7.4945 18 6 4.1265 -7.6577 9.1204 19 7 5.1479 -7.2791 9.8281 20 6 5.3142 -8.1511 10.8592 21 6 6.2259 -8.2396 11.9120 22 6 6.1298 -9.2763 12.8135 23 6 5.1330 -10.2315 12.6814 24 6 4.2251 -10.1566 11.6457 25 6 4.3077 -9.1203 10.7285 26 8 3.5917 -8.7759 9.6357 27 6 4.7232 -6.9022 6.8348 28 6 4.2065 -6.1806 5.5878 29 6 2.3313 -2.7516 2.4247 30 6 1.8674 -2.0936 1.3031 31 9 1.3544 -2.7995 0.2717 32 1 -0.3933 0.4417 -0.7650 33 1 1.7923 -0.5138 -0.8899 34 1 1.5878 2.4586 -1.2243 35 1 1.5615 2.4679 1.2084 36 1 2.4905 1.0976 2.2223 37 1 2.9362 -4.5723 4.0257 38 1 2.4006 -3.7818 7.2795 39 1 1.8295 -5.3323 6.6177 40 1 2.4217 -5.5513 9.0159 41 1 4.0713 -4.9857 8.6602 42 1 7.0035 -7.4978 12.0197 43 1 6.8351 -9.3459 13.6284 44 1 5.0678 -11.0403 13.3942 45 1 3.4518 -10.9043 11.5489 46 1 5.0150 -7.9188 6.5710 47 1 5.5859 -6.3679 7.2327 48 1 3.3436 -6.7146 5.1897 49 1 4.9935 -6.1488 4.8343 50 1 2.2849 -3.8293 2.4779 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13774298_12360598.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:29:37 Heat of formation + Delta-G solvation = -86.674234 kcal Electronic energy + Delta-G solvation = -38280.840575 eV Core-core repulsion = 32876.979151 eV Total energy + Delta-G solvation = -5403.861424 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.143 amu Computer time = 1.77 seconds Orbital eigenvalues (eV) -50.11032 -50.08626 -44.35950 -41.52276 -40.21210 -39.37482 -38.83824 -37.76313 -36.15078 -35.35643 -33.64833 -31.92391 -31.80545 -31.65119 -31.38355 -29.64776 -27.78220 -25.40783 -24.40046 -24.18003 -23.88829 -23.54824 -23.08630 -22.27828 -21.70825 -20.97047 -19.54106 -19.05090 -18.77175 -18.66331 -18.43087 -18.34053 -17.82313 -17.46111 -17.26853 -17.13614 -16.83351 -16.51083 -16.21842 -16.06098 -15.73572 -15.63941 -15.50733 -15.37940 -15.19447 -15.16672 -14.99090 -14.69118 -14.49835 -14.11358 -13.98917 -13.89294 -13.72729 -13.59571 -13.53333 -13.32478 -13.20033 -13.05936 -12.64440 -12.54989 -12.49688 -12.35825 -12.29214 -12.18210 -11.99285 -11.65796 -11.49828 -11.41288 -11.16408 -10.63449 -10.59140 -10.18608 -9.87406 -9.81447 -9.51471 -4.97555 -0.80314 -0.37911 -0.29956 0.15586 1.15026 1.31457 1.35962 1.39122 1.54781 1.84524 1.88356 2.24448 2.59643 2.68511 2.76079 2.85135 3.07191 3.33354 3.40665 3.43992 3.54284 3.58635 3.64221 3.72581 3.76963 3.85868 4.04548 4.07594 4.13995 4.15059 4.23064 4.25688 4.28687 4.29454 4.32225 4.34956 4.41144 4.42793 4.52038 4.60284 4.69059 4.71791 4.75212 4.86505 4.93909 4.98933 4.99696 5.05920 5.11591 5.17369 5.22440 5.25584 5.28720 5.33831 5.37799 5.44059 5.66373 6.35595 6.48856 6.51137 7.03533 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.090 4.090 3 Si 0.764 3.236 4 C -0.056 4.056 5 C -0.133 4.133 6 C 0.138 3.862 7 F -0.125 7.125 8 C -0.147 4.147 9 C 0.559 3.441 10 O -0.561 6.561 11 N -0.700 5.700 12 C 0.144 3.856 13 H 0.069 0.931 14 C -0.120 4.120 15 C -0.100 4.100 16 C 0.008 3.992 17 H 0.129 0.871 18 C 0.252 3.748 19 N -0.501 5.501 20 C -0.010 4.010 21 C -0.082 4.082 22 C -0.112 4.112 23 C -0.087 4.087 24 C -0.102 4.102 25 C -0.020 4.020 26 O -0.224 6.224 27 C -0.101 4.101 28 C -0.113 4.113 29 C -0.074 4.074 30 C 0.104 3.896 31 F -0.125 7.125 32 H 0.401 0.599 33 H 0.106 0.894 34 H -0.275 1.275 35 H -0.290 1.290 36 H 0.164 0.836 37 H 0.418 0.582 38 H 0.054 0.946 39 H 0.094 0.906 40 H 0.069 0.931 41 H 0.060 0.940 42 H 0.141 0.859 43 H 0.168 0.832 44 H 0.176 0.824 45 H 0.154 0.846 46 H 0.083 0.917 47 H 0.064 0.936 48 H 0.103 0.897 49 H 0.091 0.909 50 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.109 -5.460 -5.029 7.424 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.198 4.198 3 Si 0.668 3.332 4 C -0.057 4.057 5 C -0.151 4.151 6 C 0.117 3.883 7 F -0.103 7.103 8 C -0.151 4.151 9 C 0.346 3.654 10 O -0.440 6.440 11 N -0.353 5.353 12 C 0.039 3.961 13 H 0.088 0.912 14 C -0.159 4.159 15 C -0.139 4.139 16 C -0.011 4.011 17 H 0.147 0.853 18 C 0.040 3.960 19 N -0.230 5.230 20 C -0.121 4.121 21 C -0.101 4.101 22 C -0.131 4.131 23 C -0.104 4.104 24 C -0.121 4.121 25 C -0.070 4.070 26 O -0.116 6.116 27 C -0.140 4.140 28 C -0.150 4.150 29 C -0.093 4.093 30 C 0.084 3.916 31 F -0.104 7.104 32 H 0.253 0.747 33 H 0.124 0.876 34 H -0.201 1.201 35 H -0.218 1.218 36 H 0.182 0.818 37 H 0.257 0.743 38 H 0.073 0.927 39 H 0.112 0.888 40 H 0.088 0.912 41 H 0.079 0.921 42 H 0.158 0.842 43 H 0.185 0.815 44 H 0.193 0.807 45 H 0.172 0.828 46 H 0.102 0.898 47 H 0.083 0.917 48 H 0.122 0.878 49 H 0.109 0.891 50 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 0.484 -4.007 -3.944 5.643 hybrid contribution -1.665 -0.441 -0.351 1.758 sum -1.181 -4.447 -4.294 6.294 Atomic orbital electron populations 1.86536 1.17445 1.80946 1.51423 1.24963 0.85030 1.12458 0.97348 0.93967 0.90217 0.71626 0.77395 1.19494 0.98050 0.92226 0.95925 1.21038 1.00688 1.02112 0.91263 1.17782 0.96326 0.88657 0.85532 1.91599 1.83887 1.77697 1.57145 1.19842 1.06329 0.92140 0.96810 1.18032 0.78398 0.83205 0.85793 1.90881 1.46485 1.66898 1.39694 1.45765 1.63253 1.05105 1.21137 1.21076 0.96600 0.93677 0.84717 0.91233 1.21844 0.98978 1.00633 0.94402 1.21443 1.01555 0.92641 0.98267 1.20116 1.00593 0.94579 0.85852 0.85320 1.27054 0.88779 0.83248 0.96923 1.70562 1.17963 1.28215 1.06271 1.20321 0.99684 0.94122 0.97984 1.20660 0.97554 0.99872 0.92039 1.21516 0.99286 0.93112 0.99177 1.21543 0.92720 0.99604 0.96558 1.20339 1.02443 0.96224 0.93048 1.20795 0.94824 1.00638 0.90754 1.84479 1.51147 1.39859 1.36112 1.21495 0.96639 1.02233 0.93625 1.21764 1.03635 0.92266 0.97359 1.21370 0.95664 1.02546 0.89700 1.17320 0.99130 0.88837 0.86295 1.91563 1.84398 1.78062 1.56330 0.74715 0.87619 1.20098 1.21767 0.81843 0.74299 0.92714 0.88773 0.91200 0.92099 0.84165 0.81471 0.80693 0.82848 0.89829 0.91734 0.87818 0.89054 0.79531 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.21 12.86 -148.98 -1.92 -1.70 16 2 C -0.09 0.29 2.43 71.24 0.17 0.46 16 3 Si 0.76 -3.37 30.20 68.60 2.07 -1.30 16 4 C -0.06 0.03 5.30 -19.78 -0.10 -0.07 16 5 C -0.13 -0.11 8.62 22.28 0.19 0.08 16 6 C 0.14 0.65 7.28 22.67 0.17 0.82 16 7 F -0.13 -1.35 15.55 44.97 0.70 -0.65 16 8 C -0.15 -0.22 5.88 -20.06 -0.12 -0.34 16 9 C 0.56 2.40 7.73 86.74 0.67 3.08 16 10 O -0.56 -7.89 15.00 -3.94 -0.06 -7.95 16 11 N -0.70 2.70 5.03 -445.56 -2.24 0.46 16 12 C 0.14 -0.37 2.45 44.99 0.11 -0.26 16 13 H 0.07 0.26 7.58 -2.39 -0.02 0.24 16 14 C -0.12 0.21 5.49 30.59 0.17 0.38 16 15 C -0.10 -0.04 5.18 30.59 0.16 0.12 16 16 C 0.01 -0.01 2.66 -11.54 -0.03 -0.04 16 17 H 0.13 -0.80 8.14 -2.38 -0.02 -0.82 16 18 C 0.25 1.72 6.75 88.39 0.60 2.31 16 19 N -0.50 -5.63 11.32 -296.28 -3.35 -8.98 16 20 C -0.01 -0.11 7.24 39.32 0.28 0.18 16 21 C -0.08 -0.44 10.10 22.46 0.23 -0.21 16 22 C -0.11 0.07 10.02 22.25 0.22 0.29 16 23 C -0.09 0.16 10.03 22.31 0.22 0.38 16 24 C -0.10 -0.24 10.06 22.29 0.22 -0.01 16 25 C -0.02 -0.18 7.43 22.88 0.17 -0.01 16 26 O -0.22 -1.95 10.77 -9.99 -0.11 -2.05 16 27 C -0.10 0.36 5.18 30.61 0.16 0.52 16 28 C -0.11 0.92 5.39 30.61 0.17 1.08 16 29 C -0.07 0.32 9.52 22.57 0.21 0.54 16 30 C 0.10 -0.14 7.23 22.33 0.16 0.02 16 31 F -0.13 0.00 16.74 44.97 0.75 0.76 16 32 H 0.40 -3.40 8.74 -74.06 -0.65 -4.05 16 33 H 0.11 -0.74 7.89 -2.39 -0.02 -0.76 16 34 H -0.27 0.21 7.11 99.48 0.71 0.91 16 35 H -0.29 -0.69 6.73 99.48 0.67 -0.02 16 36 H 0.16 -0.22 4.87 -2.91 -0.01 -0.23 16 37 H 0.42 -4.78 6.63 -92.71 -0.62 -5.40 16 38 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 39 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 40 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 41 H 0.06 0.31 8.14 -2.39 -0.02 0.29 16 42 H 0.14 0.44 8.06 -2.91 -0.02 0.42 16 43 H 0.17 -1.16 8.06 -2.91 -0.02 -1.19 16 44 H 0.18 -1.56 8.06 -2.91 -0.02 -1.59 16 45 H 0.15 -0.34 8.06 -2.91 -0.02 -0.37 16 46 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 47 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 48 H 0.10 -1.35 8.14 -2.39 -0.02 -1.37 16 49 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 50 H 0.19 -2.31 6.40 -2.91 -0.02 -2.33 16 Total: 0.00 -29.61 420.90 -0.34 -29.96 By element: Atomic # 1 Polarization: -17.63 SS G_CDS: -0.22 Total: -17.86 kcal Atomic # 6 Polarization: 5.28 SS G_CDS: 4.03 Total: 9.32 kcal Atomic # 7 Polarization: -2.93 SS G_CDS: -5.59 Total: -8.52 kcal Atomic # 8 Polarization: -9.62 SS G_CDS: -2.08 Total: -11.70 kcal Atomic # 9 Polarization: -1.34 SS G_CDS: 1.45 Total: 0.11 kcal Atomic # 14 Polarization: -3.37 SS G_CDS: 2.07 Total: -1.30 kcal Total: -29.61 -0.34 -29.96 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13774298_12360598.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.719 kcal (2) G-P(sol) polarization free energy of solvation -29.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.344 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.955 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.674 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.77 seconds