Wall clock time and date at job start Sun Mar 7 2021 00:31:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37875 * 126.45669 * 2 1 4 4 C 1.46680 * 126.23235 * 359.75536 * 3 2 1 5 5 O 1.21696 * 120.00268 * 0.02562 * 4 3 2 6 6 N 1.34773 * 119.99675 * 179.97438 * 4 3 2 7 7 C 1.46508 * 119.99665 * 180.02562 * 6 4 3 8 8 H 1.08993 * 109.47270 * 35.00440 * 7 6 4 9 9 C 1.52998 * 109.46792 * 155.00284 * 7 6 4 10 10 C 1.53005 * 109.46773 * 179.97438 * 9 7 6 11 11 C 1.52998 * 109.47242 * 300.00031 * 10 9 7 12 12 H 1.08997 * 109.47309 * 299.99607 * 11 10 9 13 13 C 1.50710 * 109.46997 * 180.02562 * 11 10 9 14 14 N 1.29907 * 124.84850 * 299.69697 * 13 11 10 15 15 C 1.36067 * 108.79616 * 179.83727 * 14 13 11 16 16 C 1.39540 * 133.80901 * 180.11493 * 15 14 13 17 17 C 1.37715 * 119.73330 * 180.32746 * 16 15 14 18 18 C 1.38686 * 120.42194 * 0.02562 * 17 16 15 19 19 C 1.37948 * 120.46829 * 359.93441 * 18 17 16 20 20 C 1.38622 * 119.88065 * 0.08381 * 19 18 17 21 21 O 1.34233 * 124.85158 * 119.99948 * 13 11 10 22 22 C 1.52998 * 109.47262 * 60.00268 * 11 10 9 23 23 C 1.53005 * 109.46932 * 299.99659 * 22 11 10 24 24 N 1.37645 * 107.53348 * 180.02562 * 3 2 1 25 25 C 1.35535 * 108.64529 * 359.97438 * 24 3 2 26 26 C 1.50701 * 125.56339 * 180.02562 * 25 24 3 27 27 O 1.42896 * 109.47010 * 299.96891 * 26 25 24 28 28 Si 1.86298 * 109.46882 * 179.97438 * 26 25 24 29 29 C 1.35454 * 108.87121 * 359.97438 * 25 24 3 30 30 H 1.08997 * 109.47145 * 89.99916 * 1 2 3 31 31 H 1.08998 * 109.47083 * 210.00618 * 1 2 3 32 32 H 1.09005 * 109.46652 * 329.99815 * 1 2 3 33 33 H 0.96998 * 120.00629 * 0.02562 * 6 4 3 34 34 H 1.08992 * 109.47415 * 299.99651 * 9 7 6 35 35 H 1.08997 * 109.47499 * 60.00286 * 9 7 6 36 36 H 1.09000 * 109.47374 * 60.00113 * 10 9 7 37 37 H 1.09006 * 109.46823 * 179.97438 * 10 9 7 38 38 H 1.08007 * 120.13647 * 0.35241 * 16 15 14 39 39 H 1.07997 * 119.79815 * 179.97438 * 17 16 15 40 40 H 1.07996 * 119.76526 * 179.97438 * 18 17 16 41 41 H 1.08009 * 120.06061 * 180.02562 * 19 18 17 42 42 H 1.08997 * 109.47499 * 59.99455 * 22 11 10 43 43 H 1.09003 * 109.46946 * 180.02562 * 22 11 10 44 44 H 1.09004 * 109.47183 * 300.00373 * 23 22 11 45 45 H 1.08991 * 109.47390 * 179.97438 * 23 22 11 46 46 H 0.97004 * 125.68159 * 180.02562 * 24 3 2 47 47 H 1.08993 * 109.47488 * 59.97151 * 26 25 24 48 48 H 0.96701 * 114.00275 * 179.97438 * 27 26 25 49 49 H 1.48504 * 110.00495 * 59.99475 * 28 26 25 50 50 H 1.48497 * 110.00030 * 181.31668 * 28 26 25 51 51 H 1.07993 * 126.06640 * 180.02562 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5093 -0.0051 5 8 0.7026 2.7767 -0.0093 6 7 2.8037 3.4999 -0.0039 7 6 2.3677 4.8986 -0.0084 8 1 1.4540 4.9963 0.5777 9 6 3.4620 5.7757 0.6032 10 6 3.0070 7.2365 0.5979 11 6 2.7407 7.6826 -0.8411 12 1 3.6546 7.5847 -1.4269 13 6 2.2931 9.1217 -0.8463 14 7 1.2335 9.5717 -0.2443 15 6 1.1433 10.9122 -0.4592 16 6 0.2354 11.8951 -0.0630 17 6 0.4238 13.1996 -0.4620 18 6 1.5091 13.5418 -1.2548 19 6 2.4149 12.5807 -1.6532 20 6 2.2405 11.2626 -1.2611 21 8 2.9292 10.1206 -1.4783 22 6 1.6464 6.8055 -1.4527 23 6 2.1014 5.3446 -1.4476 24 7 3.6284 0.6626 -0.0006 25 6 3.6218 -0.6928 -0.0004 26 6 4.8434 -1.5752 -0.0003 27 8 5.6235 -1.3087 -1.1675 28 14 4.3183 -3.3626 0.0008 29 6 2.3379 -1.1247 0.0009 30 1 -0.3633 0.0000 -1.0276 31 1 -0.3633 -0.8899 0.5139 32 1 -0.3633 0.8900 0.5139 33 1 3.7500 3.2869 -0.0001 34 1 3.6520 5.4577 1.6282 35 1 4.3758 5.6781 0.0172 36 1 2.0930 7.3346 1.1837 37 1 3.7865 7.8614 1.0341 38 1 -0.6114 11.6339 0.5544 39 1 -0.2784 13.9611 -0.1563 40 1 1.6463 14.5680 -1.5619 41 1 3.2580 12.8545 -2.2703 42 1 0.7324 6.9034 -0.8669 43 1 1.4570 7.1230 -2.4781 44 1 3.0154 5.2467 -2.0334 45 1 1.3217 4.7197 -1.8828 46 1 4.4191 1.2244 -0.0004 47 1 5.4392 -1.3710 0.8893 48 1 6.4275 -1.8420 -1.2335 49 1 3.5052 -3.6540 -1.2072 50 1 5.5136 -4.2432 0.0329 51 1 2.0137 -2.1548 0.0018 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13774298_13940406.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:31:53 Heat of formation + Delta-G solvation = 4.853002 kcal Electronic energy + Delta-G solvation = -34007.637237 eV Core-core repulsion = 29453.915294 eV Total energy + Delta-G solvation = -4553.721943 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.173 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -44.37738 -42.58456 -40.84368 -39.39821 -38.84080 -37.82407 -36.16613 -35.35883 -33.56686 -32.41336 -31.96790 -31.71327 -31.35939 -29.61231 -28.19735 -26.91967 -25.18772 -24.09990 -23.92616 -23.21023 -22.70208 -21.97106 -21.47709 -21.13516 -20.26163 -19.38714 -19.05307 -18.60826 -18.35747 -17.84025 -17.49733 -17.00293 -16.80035 -16.45940 -16.00020 -15.78167 -15.45042 -15.31171 -15.14945 -15.02574 -14.89100 -14.79537 -14.61435 -14.36070 -14.02788 -13.96500 -13.84897 -13.58871 -13.54688 -13.36329 -13.29976 -13.21239 -13.12434 -12.65486 -12.56487 -12.51133 -12.44373 -12.34577 -12.22783 -12.00069 -11.68820 -11.52287 -11.43387 -11.08839 -10.62790 -10.23944 -9.88738 -9.81685 -9.52898 -9.16948 -4.83953 -0.39508 0.14381 0.30810 1.21564 1.29416 1.34101 1.53701 1.65370 1.94035 2.01449 2.20055 2.26931 2.58461 2.66799 3.24451 3.40022 3.49427 3.54792 3.67463 3.78910 3.82798 3.84213 4.02835 4.04719 4.12131 4.14189 4.18297 4.20744 4.23929 4.25631 4.26736 4.38213 4.39683 4.43310 4.52420 4.67666 4.72370 4.81697 4.84643 4.88867 4.91706 4.94373 4.98304 5.02376 5.07139 5.14546 5.15692 5.18724 5.23352 5.27357 5.32654 5.35560 5.42858 5.64955 5.65288 5.85508 6.32462 6.48881 6.49232 6.54378 7.09447 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.087 4.087 3 C -0.070 4.070 4 C 0.589 3.411 5 O -0.560 6.560 6 N -0.713 5.713 7 C 0.146 3.854 8 H 0.071 0.929 9 C -0.112 4.112 10 C -0.100 4.100 11 C 0.008 3.992 12 H 0.126 0.874 13 C 0.251 3.749 14 N -0.500 5.500 15 C -0.011 4.011 16 C -0.082 4.082 17 C -0.112 4.112 18 C -0.086 4.086 19 C -0.102 4.102 20 C -0.020 4.020 21 O -0.224 6.224 22 C -0.099 4.099 23 C -0.119 4.119 24 N -0.513 5.513 25 C 0.073 3.927 26 C -0.064 4.064 27 O -0.561 6.561 28 Si 0.784 3.216 29 C -0.211 4.211 30 H 0.062 0.938 31 H 0.082 0.918 32 H 0.063 0.937 33 H 0.409 0.591 34 H 0.088 0.912 35 H 0.098 0.902 36 H 0.065 0.935 37 H 0.083 0.917 38 H 0.141 0.859 39 H 0.168 0.832 40 H 0.176 0.824 41 H 0.154 0.846 42 H 0.062 0.938 43 H 0.069 0.931 44 H 0.088 0.912 45 H 0.055 0.945 46 H 0.428 0.572 47 H 0.108 0.892 48 H 0.401 0.599 49 H -0.302 1.302 50 H -0.278 1.278 51 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.178 0.183 2.414 7.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.096 4.096 3 C -0.183 4.183 4 C 0.378 3.622 5 O -0.439 6.439 6 N -0.364 5.364 7 C 0.042 3.958 8 H 0.089 0.911 9 C -0.150 4.150 10 C -0.139 4.139 11 C -0.011 4.011 12 H 0.144 0.856 13 C 0.039 3.961 14 N -0.229 5.229 15 C -0.121 4.121 16 C -0.100 4.100 17 C -0.131 4.131 18 C -0.104 4.104 19 C -0.121 4.121 20 C -0.070 4.070 21 O -0.117 6.117 22 C -0.138 4.138 23 C -0.157 4.157 24 N -0.110 5.110 25 C -0.046 4.046 26 C -0.172 4.172 27 O -0.372 6.372 28 Si 0.688 3.312 29 C -0.235 4.235 30 H 0.081 0.919 31 H 0.101 0.899 32 H 0.082 0.918 33 H 0.245 0.755 34 H 0.107 0.893 35 H 0.117 0.883 36 H 0.084 0.916 37 H 0.101 0.899 38 H 0.159 0.841 39 H 0.186 0.814 40 H 0.193 0.807 41 H 0.171 0.829 42 H 0.081 0.919 43 H 0.088 0.912 44 H 0.106 0.894 45 H 0.074 0.926 46 H 0.268 0.732 47 H 0.126 0.874 48 H 0.253 0.747 49 H -0.229 1.229 50 H -0.205 1.205 51 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 5.604 -0.133 2.249 6.041 hybrid contribution 1.911 0.792 -1.213 2.398 sum 7.516 0.659 1.037 7.615 Atomic orbital electron populations 1.20333 0.89119 1.03127 1.02097 1.20151 0.96350 0.91252 1.01834 1.20149 0.84376 0.93229 1.20523 1.17160 0.85672 0.83611 0.75780 1.90827 1.17602 1.83698 1.51777 1.45788 1.09664 1.05714 1.75270 1.21028 0.98898 0.79330 0.96555 0.91112 1.21736 0.98008 0.92303 1.02950 1.21476 1.02824 0.96485 0.93118 1.20089 1.00946 0.79510 1.00558 0.85560 1.27009 0.87114 0.92997 0.88930 1.70567 1.19260 1.08854 1.24199 1.20327 0.98551 0.91173 1.02092 1.20660 0.97985 0.91418 0.99984 1.21520 0.98800 0.95411 0.97338 1.21548 0.92551 1.00409 0.95857 1.20340 1.02666 0.86486 1.02601 1.20798 0.94399 0.88892 1.02915 1.84477 1.48914 1.15986 1.62278 1.21438 0.97368 0.93771 1.01231 1.21831 1.02511 0.94492 0.96904 1.41755 1.06866 1.06617 1.55758 1.20151 0.95536 0.82921 1.05977 1.24708 0.91870 1.09446 0.91186 1.86519 1.40595 1.66425 1.43630 0.93453 0.80626 0.70556 0.86588 1.20767 0.90883 0.99542 1.12287 0.91902 0.89912 0.91828 0.75461 0.89331 0.88308 0.91580 0.89854 0.84108 0.81415 0.80660 0.82871 0.91873 0.91181 0.89355 0.92646 0.73184 0.87404 0.74726 1.22936 1.20487 0.81874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.57 9.82 71.24 0.70 0.13 16 2 C -0.09 -0.58 6.21 -19.56 -0.12 -0.70 16 3 C -0.07 -0.35 7.06 40.35 0.28 -0.07 16 4 C 0.59 3.84 7.75 86.45 0.67 4.51 16 5 O -0.56 -8.03 14.47 -4.34 -0.06 -8.09 16 6 N -0.71 0.99 5.07 -446.48 -2.26 -1.28 16 7 C 0.15 -0.14 2.46 44.99 0.11 -0.03 16 8 H 0.07 0.35 7.58 -2.39 -0.02 0.33 16 9 C -0.11 0.73 5.39 30.60 0.16 0.89 16 10 C -0.10 0.25 5.18 30.59 0.16 0.41 16 11 C 0.01 0.00 2.66 -11.54 -0.03 -0.03 16 12 H 0.13 -0.63 8.14 -2.39 -0.02 -0.65 16 13 C 0.25 1.85 6.75 88.40 0.60 2.45 16 14 N -0.50 -5.78 11.32 -296.26 -3.35 -9.13 16 15 C -0.01 -0.11 7.24 39.31 0.28 0.17 16 16 C -0.08 -0.44 10.09 22.46 0.23 -0.21 16 17 C -0.11 0.06 10.02 22.25 0.22 0.29 16 18 C -0.09 0.15 10.03 22.31 0.22 0.37 16 19 C -0.10 -0.26 10.06 22.29 0.22 -0.04 16 20 C -0.02 -0.18 7.43 22.88 0.17 -0.01 16 21 O -0.22 -2.06 10.77 -9.99 -0.11 -2.17 16 22 C -0.10 -0.13 5.18 30.60 0.16 0.03 16 23 C -0.12 0.03 5.49 30.60 0.17 0.20 16 24 N -0.51 0.34 5.99 -171.93 -1.03 -0.69 16 25 C 0.07 0.03 6.51 41.34 0.27 0.29 16 26 C -0.06 0.30 3.07 71.24 0.22 0.51 16 27 O -0.56 1.47 12.85 -148.98 -1.92 -0.45 16 28 Si 0.78 -3.57 30.54 68.60 2.10 -1.47 16 29 C -0.21 -0.58 9.27 22.01 0.20 -0.38 16 30 H 0.06 0.43 8.14 -2.39 -0.02 0.41 16 31 H 0.08 0.18 8.14 -2.39 -0.02 0.16 16 32 H 0.06 0.65 6.50 -2.38 -0.02 0.63 16 33 H 0.41 -3.25 7.73 -92.71 -0.72 -3.96 16 34 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 35 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 36 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 37 H 0.08 -0.30 8.14 -2.38 -0.02 -0.32 16 38 H 0.14 0.44 8.06 -2.91 -0.02 0.42 16 39 H 0.17 -1.17 8.06 -2.91 -0.02 -1.19 16 40 H 0.18 -1.55 8.06 -2.91 -0.02 -1.58 16 41 H 0.15 -0.31 8.06 -2.91 -0.02 -0.33 16 42 H 0.06 0.35 8.14 -2.39 -0.02 0.33 16 43 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 44 H 0.09 -0.36 8.14 -2.38 -0.02 -0.38 16 45 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 46 H 0.43 -2.89 8.19 -92.71 -0.76 -3.65 16 47 H 0.11 -1.09 7.96 -2.39 -0.02 -1.10 16 48 H 0.40 -4.25 8.74 -74.06 -0.65 -4.89 16 49 H -0.30 -1.28 7.11 99.48 0.71 -0.57 16 50 H -0.28 0.37 7.11 99.48 0.71 1.07 16 51 H 0.16 -0.19 6.17 -2.91 -0.02 -0.21 16 Total: 0.00 -28.46 417.56 -2.82 -31.28 By element: Atomic # 1 Polarization: -15.71 SS G_CDS: -1.09 Total: -16.79 kcal Atomic # 6 Polarization: 3.89 SS G_CDS: 4.90 Total: 8.80 kcal Atomic # 7 Polarization: -4.45 SS G_CDS: -6.65 Total: -11.10 kcal Atomic # 8 Polarization: -8.62 SS G_CDS: -2.09 Total: -10.71 kcal Atomic # 14 Polarization: -3.57 SS G_CDS: 2.10 Total: -1.47 kcal Total: -28.46 -2.82 -31.28 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13774298_13940406.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.136 kcal (2) G-P(sol) polarization free energy of solvation -28.459 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.677 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.824 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.283 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.853 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds