Wall clock time and date at job start Sun Mar 7 2021 00:31:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86307 * 109.46726 * 2 1 4 4 C 1.50692 * 109.47710 * 239.99752 * 2 1 3 5 5 C 1.34858 * 125.89139 * 119.95159 * 4 2 1 6 6 C 1.40891 * 107.41436 * 179.81015 * 5 4 2 7 7 C 1.34847 * 107.42171 * 0.38062 * 6 5 4 8 8 C 1.50697 * 125.89308 * 179.89015 * 7 6 5 9 9 C 1.50699 * 109.46810 * 274.68743 * 8 7 6 10 10 O 1.21282 * 120.00006 * 359.97438 * 9 8 7 11 11 N 1.34775 * 120.00244 * 180.02562 * 9 8 7 12 12 C 1.46500 * 120.00366 * 180.02562 * 11 9 8 13 13 H 1.09000 * 109.47175 * 34.99887 * 12 11 9 14 14 C 1.53006 * 109.46998 * 154.99756 * 12 11 9 15 15 C 1.52999 * 109.46626 * 179.97438 * 14 12 11 16 16 C 1.52997 * 109.47592 * 300.00035 * 15 14 12 17 17 H 1.09000 * 109.47140 * 300.00346 * 16 15 14 18 18 C 1.50699 * 109.47265 * 180.02562 * 16 15 14 19 19 N 1.29905 * 124.85267 * 119.99754 * 18 16 15 20 20 C 1.36065 * 108.80607 * 179.97438 * 19 18 16 21 21 C 1.39536 * 133.81248 * 180.02562 * 20 19 18 22 22 C 1.37725 * 119.73162 * 180.02562 * 21 20 19 23 23 C 1.38681 * 120.41866 * 0.02562 * 22 21 20 24 24 C 1.37951 * 120.47283 * 0.02562 * 23 22 21 25 25 C 1.38621 * 119.87691 * 359.97438 * 24 23 22 26 26 O 1.34233 * 124.85200 * 299.70033 * 18 16 15 27 27 C 1.52996 * 109.47165 * 60.00300 * 16 15 14 28 28 C 1.52997 * 109.47204 * 274.99782 * 12 11 9 29 29 N 1.36342 * 108.21543 * 359.62074 * 7 6 5 30 30 H 0.96690 * 114.00061 * 60.00739 * 1 2 3 31 31 H 1.09007 * 109.47303 * 119.99465 * 2 1 3 32 32 H 1.48498 * 109.99676 * 298.67776 * 3 2 1 33 33 H 1.48499 * 110.00161 * 59.99555 * 3 2 1 34 34 H 1.07993 * 126.29193 * 0.02562 * 5 4 2 35 35 H 1.08001 * 126.28777 * 180.24522 * 6 5 4 36 36 H 1.08996 * 109.47451 * 154.69240 * 8 7 6 37 37 H 1.09001 * 109.47426 * 34.68578 * 8 7 6 38 38 H 0.97001 * 119.99752 * 359.97438 * 11 9 8 39 39 H 1.08993 * 109.46955 * 300.00226 * 14 12 11 40 40 H 1.09000 * 109.47050 * 60.00054 * 14 12 11 41 41 H 1.09000 * 109.47160 * 60.00369 * 15 14 12 42 42 H 1.09002 * 109.46719 * 180.02562 * 15 14 12 43 43 H 1.08001 * 120.13634 * 0.02562 * 21 20 19 44 44 H 1.07994 * 119.79337 * 180.02562 * 22 21 20 45 45 H 1.08003 * 119.76266 * 179.97438 * 23 22 21 46 46 H 1.08004 * 120.05900 * 180.02562 * 24 23 22 47 47 H 1.08992 * 109.47534 * 180.02562 * 27 16 15 48 48 H 1.08996 * 109.47134 * 59.99508 * 27 16 15 49 49 H 1.09000 * 109.47140 * 300.00127 * 28 12 11 50 50 H 1.09001 * 109.47230 * 59.99271 * 28 12 11 51 51 H 0.96998 * 125.63844 * 180.26239 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9315 -0.7104 -1.2303 5 6 2.7093 -0.1724 -2.1916 6 6 2.9483 -1.1758 -3.1513 7 6 2.3006 -2.2863 -2.7443 8 6 2.2753 -3.6090 -3.4660 9 6 1.1819 -3.5946 -4.5030 10 8 0.4909 -2.6076 -4.6419 11 7 0.9713 -4.6788 -5.2753 12 6 -0.0913 -4.6646 -6.2837 13 1 -0.1748 -3.6647 -6.7096 14 6 0.2441 -5.6646 -7.3921 15 6 -0.8659 -5.6502 -8.4449 16 6 -2.1936 -6.0393 -7.7917 17 1 -2.1097 -7.0391 -7.3658 18 6 -3.2868 -6.0257 -8.8289 19 7 -4.0116 -7.0526 -9.1571 20 6 -4.8948 -6.6760 -10.1211 21 6 -5.8931 -7.3442 -10.8310 22 6 -6.6364 -6.6633 -11.7694 23 6 -6.3983 -5.3189 -12.0129 24 6 -5.4140 -4.6459 -11.3193 25 6 -4.6563 -5.3157 -10.3712 26 8 -3.6546 -4.9493 -9.5416 27 6 -2.5290 -5.0393 -6.6834 28 6 -1.4193 -5.0534 -5.6309 29 7 1.6773 -2.0077 -1.5641 30 1 -0.3933 0.4416 -0.7650 31 1 1.7924 -0.5138 0.8901 32 1 1.5878 2.4585 -1.2243 33 1 1.5613 2.4680 1.2084 34 1 3.0834 0.8403 -2.2189 35 1 3.5397 -1.0737 -4.0492 36 1 2.0871 -4.4096 -2.7508 37 1 3.2360 -3.7754 -3.9533 38 1 1.5237 -5.4683 -5.1639 39 1 1.1902 -5.3877 -7.8572 40 1 0.3276 -6.6645 -6.9663 41 1 -0.9498 -4.6504 -8.8708 42 1 -0.6272 -6.3630 -9.2343 43 1 -6.0821 -8.3913 -10.6454 44 1 -7.4095 -7.1794 -12.3191 45 1 -6.9873 -4.7953 -12.7514 46 1 -5.2345 -3.5988 -11.5140 47 1 -3.4746 -5.3167 -6.2177 48 1 -2.6128 -4.0395 -7.1092 49 1 -1.3358 -6.0533 -5.2050 50 1 -1.6582 -4.3410 -4.8412 51 1 1.1418 -2.6296 -1.0472 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13774298_14644196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:31:59 Heat of formation + Delta-G solvation = 7.964160 kcal Electronic energy + Delta-G solvation = -33721.836883 eV Core-core repulsion = 29168.249850 eV Total energy + Delta-G solvation = -4553.587033 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.173 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -44.24406 -42.29044 -41.00573 -39.47333 -38.76714 -37.75369 -35.90224 -35.29584 -33.30814 -32.07340 -31.88513 -31.77232 -31.62165 -29.89373 -28.97477 -25.58016 -24.69854 -24.12393 -24.02483 -23.02565 -22.34584 -21.68603 -21.32215 -21.22966 -20.82449 -19.01295 -18.87918 -18.26071 -18.06095 -17.64198 -17.60356 -17.05882 -16.70698 -16.37517 -16.33543 -15.72912 -15.46897 -15.40708 -15.15514 -15.08373 -14.93823 -14.76891 -14.55615 -14.36758 -14.11007 -13.96978 -13.88487 -13.73526 -13.54158 -13.48257 -13.39330 -13.25175 -12.82735 -12.57620 -12.51523 -12.46328 -12.39305 -12.30861 -12.10492 -11.73903 -11.70414 -11.49833 -11.43169 -10.86245 -10.75300 -10.12030 -9.79827 -9.70573 -9.43460 -8.89454 -4.87105 -0.30983 0.23535 1.13116 1.34088 1.41692 1.47783 1.62601 1.72173 1.89401 1.99974 2.26695 2.50448 2.65714 2.66303 3.39515 3.39708 3.45574 3.52469 3.63115 3.72289 3.76223 3.85275 3.90930 3.94352 3.99742 4.02630 4.11858 4.15161 4.19646 4.21459 4.25122 4.28175 4.34946 4.38756 4.47466 4.48944 4.60808 4.61384 4.80870 4.83440 4.84526 4.86879 4.91325 4.95745 5.04555 5.08790 5.17530 5.21818 5.31381 5.33101 5.35506 5.36714 5.42091 5.64047 6.05416 6.20730 6.41300 6.41904 6.64267 6.67220 7.20995 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.055 4.055 3 Si 0.714 3.286 4 C -0.009 4.009 5 C -0.186 4.186 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.072 4.072 9 C 0.512 3.488 10 O -0.522 6.522 11 N -0.730 5.730 12 C 0.143 3.857 13 H 0.092 0.908 14 C -0.124 4.124 15 C -0.112 4.112 16 C 0.003 3.997 17 H 0.119 0.881 18 C 0.257 3.743 19 N -0.478 5.478 20 C 0.020 3.980 21 C -0.062 4.062 22 C -0.119 4.119 23 C -0.092 4.092 24 C -0.093 4.093 25 C 0.007 3.993 26 O -0.210 6.210 27 C -0.113 4.113 28 C -0.126 4.126 29 N -0.535 5.535 30 H 0.379 0.621 31 H 0.114 0.886 32 H -0.257 1.257 33 H -0.258 1.258 34 H 0.141 0.859 35 H 0.136 0.864 36 H 0.100 0.900 37 H 0.118 0.882 38 H 0.401 0.599 39 H 0.079 0.921 40 H 0.075 0.925 41 H 0.077 0.923 42 H 0.078 0.922 43 H 0.137 0.863 44 H 0.139 0.861 45 H 0.142 0.858 46 H 0.136 0.864 47 H 0.075 0.925 48 H 0.076 0.924 49 H 0.070 0.930 50 H 0.075 0.925 51 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.850 -3.249 -1.090 5.154 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.164 4.164 3 Si 0.613 3.387 4 C -0.123 4.123 5 C -0.211 4.211 6 C -0.198 4.198 7 C -0.077 4.077 8 C -0.113 4.113 9 C 0.297 3.703 10 O -0.396 6.396 11 N -0.382 5.382 12 C 0.038 3.962 13 H 0.110 0.890 14 C -0.162 4.162 15 C -0.151 4.151 16 C -0.016 4.016 17 H 0.137 0.863 18 C 0.046 3.954 19 N -0.207 5.207 20 C -0.091 4.091 21 C -0.081 4.081 22 C -0.138 4.138 23 C -0.111 4.111 24 C -0.112 4.112 25 C -0.043 4.043 26 O -0.101 6.101 27 C -0.152 4.152 28 C -0.165 4.165 29 N -0.130 5.130 30 H 0.228 0.772 31 H 0.132 0.868 32 H -0.182 1.182 33 H -0.183 1.183 34 H 0.159 0.841 35 H 0.154 0.846 36 H 0.118 0.882 37 H 0.136 0.864 38 H 0.235 0.765 39 H 0.098 0.902 40 H 0.094 0.906 41 H 0.096 0.904 42 H 0.097 0.903 43 H 0.155 0.845 44 H 0.157 0.843 45 H 0.160 0.840 46 H 0.154 0.846 47 H 0.094 0.906 48 H 0.095 0.905 49 H 0.089 0.911 50 H 0.093 0.907 51 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges 3.167 -2.681 -0.302 4.160 hybrid contribution -1.225 -0.405 -0.647 1.444 sum 1.941 -3.086 -0.949 3.767 Atomic orbital electron populations 1.86558 1.17965 1.80238 1.49639 1.24779 0.83749 1.11429 0.96488 0.94448 0.91418 0.72591 0.80210 1.20781 1.05921 0.85414 1.00143 1.20652 1.04521 0.99992 0.95924 1.20584 1.05712 0.92329 1.01143 1.19479 1.02252 0.96493 0.89507 1.20141 0.99772 0.94723 0.96674 1.20616 0.84915 0.82775 0.81962 1.90772 1.47828 1.32736 1.68291 1.46058 1.36711 1.17259 1.38189 1.21027 0.86361 1.00920 0.87857 0.89013 1.21782 0.99017 0.99745 0.95610 1.21577 0.92008 1.03424 0.98099 1.20030 0.88358 1.03216 0.89986 0.86292 1.26380 0.96372 0.79099 0.93573 1.70657 1.07338 1.28640 1.14072 1.19904 0.99087 0.92239 0.97910 1.20370 0.92873 1.00384 0.94460 1.21113 1.00028 0.94587 0.98084 1.21086 0.96489 0.94585 0.98895 1.19939 0.95595 1.00636 0.95012 1.20364 0.92337 0.95325 0.96302 1.84487 1.43854 1.38098 1.43693 1.21583 0.99299 0.99323 0.94990 1.21889 0.93762 1.02607 0.98226 1.41785 1.41031 1.11001 1.19202 0.77235 0.86768 1.18157 1.18318 0.84104 0.84591 0.88222 0.86431 0.76470 0.90207 0.90620 0.90405 0.90296 0.84546 0.84307 0.84006 0.84591 0.90629 0.90511 0.91131 0.90654 0.75129 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.18 12.88 -35.23 -0.45 -1.63 16 2 C -0.06 -0.03 3.08 36.00 0.11 0.08 16 3 Si 0.71 -0.20 30.59 -169.99 -5.20 -5.39 16 4 C -0.01 -0.01 6.51 -81.79 -0.53 -0.55 16 5 C -0.19 -0.36 9.37 -39.78 -0.37 -0.73 16 6 C -0.17 -0.36 10.76 -39.78 -0.43 -0.79 16 7 C 0.04 0.04 5.66 -81.79 -0.46 -0.42 16 8 C -0.07 0.16 6.24 -29.04 -0.18 -0.02 16 9 C 0.51 0.11 7.79 -10.99 -0.09 0.02 16 10 O -0.52 -2.63 15.70 5.56 0.09 -2.55 16 11 N -0.73 1.87 5.08 -53.80 -0.27 1.60 16 12 C 0.14 -0.24 2.45 -67.93 -0.17 -0.41 16 13 H 0.09 0.06 7.58 -51.93 -0.39 -0.33 16 14 C -0.12 0.43 5.39 -26.73 -0.14 0.28 16 15 C -0.11 0.22 5.18 -26.73 -0.14 0.08 16 16 C 0.00 0.00 2.66 -91.78 -0.24 -0.25 16 17 H 0.12 -0.19 8.14 -51.93 -0.42 -0.61 16 18 C 0.26 0.72 6.74 -13.09 -0.09 0.64 16 19 N -0.48 -2.27 11.34 -8.71 -0.10 -2.37 16 20 C 0.02 0.09 7.24 -84.71 -0.61 -0.53 16 21 C -0.06 -0.13 10.10 -39.29 -0.40 -0.53 16 22 C -0.12 -0.01 10.02 -39.61 -0.40 -0.40 16 23 C -0.09 0.02 10.03 -39.52 -0.40 -0.38 16 24 C -0.09 -0.13 10.06 -39.55 -0.40 -0.53 16 25 C 0.01 0.03 7.43 -38.65 -0.29 -0.26 16 26 O -0.21 -0.80 10.77 3.59 0.04 -0.76 16 27 C -0.11 0.08 5.19 -26.76 -0.14 -0.06 16 28 C -0.13 0.17 5.49 -26.76 -0.15 0.02 16 29 N -0.54 -0.57 6.07 -5.44 -0.03 -0.60 16 30 H 0.38 0.07 8.70 45.56 0.40 0.47 16 31 H 0.11 -0.06 7.96 -51.93 -0.41 -0.48 16 32 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 33 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 34 H 0.14 0.04 6.22 -52.49 -0.33 -0.29 16 35 H 0.14 0.13 8.06 -52.49 -0.42 -0.29 16 36 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 37 H 0.12 -0.51 8.14 -51.93 -0.42 -0.93 16 38 H 0.40 -2.20 8.60 -40.82 -0.35 -2.55 16 39 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 40 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 43 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 44 H 0.14 -0.35 8.06 -52.49 -0.42 -0.78 16 45 H 0.14 -0.42 8.06 -52.48 -0.42 -0.84 16 46 H 0.14 -0.07 8.06 -52.48 -0.42 -0.49 16 47 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 48 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 49 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 50 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 51 H 0.41 -0.22 8.96 -40.82 -0.37 -0.58 16 LS Contribution 421.89 15.07 6.36 6.36 Total: 0.00 -11.34 421.89 -12.50 -23.83 By element: Atomic # 1 Polarization: -6.33 SS G_CDS: -7.42 Total: -13.75 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: -5.51 Total: -4.73 kcal Atomic # 7 Polarization: -0.97 SS G_CDS: -0.40 Total: -1.37 kcal Atomic # 8 Polarization: -4.62 SS G_CDS: -0.33 Total: -4.94 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.20 Total: -5.39 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -11.34 -12.50 -23.83 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13774298_14644196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.798 kcal (2) G-P(sol) polarization free energy of solvation -11.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.461 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.497 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.834 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds