Wall clock time and date at job start Sun Mar 7 2021 00:34:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.33813 * 122.44377 * 2 1 4 4 C 1.50693 * 124.52900 * 359.94583 * 3 2 1 5 5 O 1.42905 * 109.47238 * 113.32972 * 4 3 2 6 6 Si 1.86302 * 109.47695 * 233.33021 * 4 3 2 7 7 S 1.70622 * 110.95018 * 179.97438 * 3 2 1 8 8 C 1.75826 * 91.56556 * 359.97438 * 7 3 2 9 9 C 1.46575 * 125.46107 * 179.97438 * 8 7 3 10 10 O 1.21709 * 120.00425 * 180.02562 * 9 8 7 11 11 N 1.34774 * 119.99990 * 0.02562 * 9 8 7 12 12 C 1.46501 * 120.00265 * 179.97438 * 11 9 8 13 13 H 1.09001 * 109.47140 * 325.00730 * 12 11 9 14 14 C 1.53009 * 109.46944 * 84.99895 * 12 11 9 15 15 C 1.52999 * 109.46889 * 179.97438 * 14 12 11 16 16 C 1.52991 * 109.47586 * 300.00253 * 15 14 12 17 17 H 1.09006 * 109.47240 * 299.99998 * 16 15 14 18 18 C 1.50705 * 109.47303 * 179.97438 * 16 15 14 19 19 N 1.29902 * 124.84983 * 299.70219 * 18 16 15 20 20 C 1.36067 * 108.79621 * 179.83499 * 19 18 16 21 21 C 1.39548 * 133.80621 * 180.11425 * 20 19 18 22 22 C 1.37720 * 119.72915 * 180.32949 * 21 20 19 23 23 C 1.38686 * 120.42075 * 359.97438 * 22 21 20 24 24 C 1.37951 * 120.47383 * 0.03221 * 23 22 21 25 25 C 1.38631 * 119.87449 * 359.97438 * 24 23 22 26 26 O 1.34228 * 124.84672 * 120.00101 * 18 16 15 27 27 C 1.52999 * 109.47242 * 59.99877 * 16 15 14 28 28 C 1.52992 * 109.47392 * 300.00413 * 27 16 15 29 29 C 1.36650 * 109.08271 * 0.24503 * 8 7 3 30 30 H 1.09005 * 109.46506 * 84.90430 * 1 2 3 31 31 H 1.08998 * 109.47397 * 204.90067 * 1 2 3 32 32 H 1.09000 * 109.47594 * 324.90263 * 1 2 3 33 33 H 1.08997 * 109.47266 * 353.33575 * 4 3 2 34 34 H 0.96700 * 113.99917 * 60.00047 * 5 4 3 35 35 H 1.48496 * 110.00003 * 179.97438 * 6 4 3 36 36 H 1.48501 * 109.99590 * 301.32173 * 6 4 3 37 37 H 0.96996 * 120.00007 * 0.02562 * 11 9 8 38 38 H 1.09001 * 109.46520 * 60.00455 * 14 12 11 39 39 H 1.09002 * 109.47088 * 300.00300 * 14 12 11 40 40 H 1.09001 * 109.46911 * 179.97438 * 15 14 12 41 41 H 1.09001 * 109.47048 * 60.00925 * 15 14 12 42 42 H 1.07997 * 120.13618 * 0.34441 * 21 20 19 43 43 H 1.07993 * 119.79107 * 179.97438 * 22 21 20 44 44 H 1.07997 * 119.76339 * 180.02562 * 23 22 21 45 45 H 1.08001 * 120.06035 * 179.97438 * 24 23 22 46 46 H 1.09006 * 109.46904 * 59.99915 * 27 16 15 47 47 H 1.09002 * 109.47117 * 180.02562 * 27 16 15 48 48 H 1.09002 * 109.47846 * 179.97438 * 28 27 16 49 49 H 1.09007 * 109.47158 * 299.99883 * 28 27 16 50 50 H 1.08004 * 123.35625 * 179.76028 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1293 0.0000 4 6 1.6354 2.5161 -0.0012 5 8 1.9392 3.1639 1.2359 6 14 2.3589 3.4974 -1.4099 7 16 3.8969 0.7893 0.0007 8 6 3.5938 -0.9426 0.0018 9 6 4.6231 -1.9861 0.0023 10 8 4.3003 -3.1596 0.0026 11 7 5.9273 -1.6461 0.0024 12 6 6.9562 -2.6890 0.0034 13 1 6.6119 -3.5385 0.5933 14 6 7.2253 -3.1414 -1.4333 15 6 8.3003 -4.2301 -1.4322 16 6 9.5887 -3.6741 -0.8229 17 1 9.9326 -2.8245 -1.4129 18 6 10.6474 -4.7467 -0.8213 19 7 10.5494 -5.8854 -0.2040 20 6 11.6850 -6.6021 -0.4233 21 6 12.1241 -7.8638 -0.0199 22 6 13.3640 -8.3142 -0.4155 23 6 14.1775 -7.5223 -1.2120 24 6 13.7564 -6.2730 -1.6181 25 6 12.5114 -5.8037 -1.2291 26 8 11.8286 -4.6594 -1.4529 27 6 9.3197 -3.2217 0.6137 28 6 8.2448 -2.1330 0.6128 29 6 2.2447 -1.1600 -0.0040 30 1 -0.3632 0.0913 -1.0237 31 1 -0.3634 -0.9321 0.4327 32 1 -0.3634 0.8408 0.5909 33 1 0.5541 2.4512 -0.1213 34 1 2.8860 3.2564 1.4093 35 1 1.7851 4.8670 -1.4223 36 1 3.8362 3.5662 -1.2748 37 1 6.1847 -0.7109 0.0025 38 1 7.5696 -2.2919 -2.0231 39 1 6.3072 -3.5371 -1.8676 40 1 8.4916 -4.5527 -2.4557 41 1 7.9564 -5.0797 -0.8423 42 1 11.4941 -8.4846 0.5999 43 1 13.7049 -9.2903 -0.1035 44 1 15.1477 -7.8862 -1.5163 45 1 14.3956 -5.6617 -2.2380 46 1 8.9758 -4.0713 1.2038 47 1 10.2376 -2.8251 1.0477 48 1 8.0527 -1.8110 1.6363 49 1 8.5886 -1.2834 0.0227 50 1 1.8019 -2.1452 -0.0083 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13774298_6739946.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:34:19 Heat of formation + Delta-G solvation = -7.212430 kcal Electronic energy + Delta-G solvation = -33489.859775 eV Core-core repulsion = 28961.966653 eV Total energy + Delta-G solvation = -4527.893123 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.134 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -44.22465 -41.20651 -40.03185 -39.31770 -38.78950 -37.70941 -35.99320 -35.18103 -32.78396 -32.02930 -31.73246 -31.59894 -29.91984 -29.60527 -26.89399 -25.23327 -24.30254 -23.97297 -23.83423 -23.03954 -22.25209 -21.67747 -20.98270 -20.24605 -19.40807 -18.98912 -18.23696 -17.94312 -17.74247 -17.63638 -17.09461 -16.92795 -16.32806 -16.07236 -15.88918 -15.71171 -15.41513 -15.30250 -15.10892 -14.94883 -14.83570 -14.61222 -14.49063 -14.13898 -14.07090 -13.93276 -13.51637 -13.43187 -13.41915 -13.24050 -13.20857 -13.08998 -12.62346 -12.59506 -12.47843 -12.38888 -12.36105 -12.29811 -12.28226 -11.81832 -11.70820 -11.48226 -11.35529 -11.06906 -10.98493 -10.20116 -9.78876 -9.72779 -9.50077 -9.41433 -5.12990 -0.66379 -0.29629 0.24652 0.26200 0.67076 1.02741 1.25391 1.41923 1.43678 1.44476 1.80671 1.97116 2.16596 2.67707 2.73840 3.13871 3.43236 3.45440 3.47223 3.52748 3.64348 3.76586 3.79755 3.97209 4.01155 4.06417 4.14138 4.15308 4.18099 4.20434 4.23672 4.28224 4.31128 4.39103 4.41715 4.43187 4.48844 4.61201 4.65322 4.76222 4.83432 4.87753 4.90206 4.94913 4.98528 5.03303 5.06300 5.11966 5.19387 5.23669 5.26362 5.32259 5.34496 5.36555 5.39554 5.65759 6.14824 6.33384 6.66365 7.08800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.092 4.092 3 C -0.228 4.228 4 C -0.042 4.042 5 O -0.522 6.522 6 Si 0.673 3.327 7 S 0.183 5.817 8 C -0.257 4.257 9 C 0.594 3.406 10 O -0.521 6.521 11 N -0.724 5.724 12 C 0.144 3.856 13 H 0.097 0.903 14 C -0.128 4.128 15 C -0.107 4.107 16 C 0.004 3.996 17 H 0.104 0.896 18 C 0.254 3.746 19 N -0.471 5.471 20 C 0.021 3.979 21 C -0.061 4.061 22 C -0.119 4.119 23 C -0.093 4.093 24 C -0.093 4.093 25 C 0.006 3.994 26 O -0.214 6.214 27 C -0.105 4.105 28 C -0.125 4.125 29 C -0.044 4.044 30 H 0.078 0.922 31 H 0.072 0.928 32 H 0.072 0.928 33 H 0.131 0.869 34 H 0.374 0.626 35 H -0.240 1.240 36 H -0.243 1.243 37 H 0.397 0.603 38 H 0.070 0.930 39 H 0.079 0.921 40 H 0.073 0.927 41 H 0.083 0.917 42 H 0.137 0.863 43 H 0.139 0.861 44 H 0.142 0.858 45 H 0.136 0.864 46 H 0.084 0.916 47 H 0.076 0.924 48 H 0.080 0.920 49 H 0.074 0.926 50 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.875 2.655 -2.479 4.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.105 4.105 3 C -0.347 4.347 4 C -0.154 4.154 5 O -0.328 6.328 6 Si 0.571 3.429 7 S 0.452 5.548 8 C -0.377 4.377 9 C 0.380 3.620 10 O -0.399 6.399 11 N -0.375 5.375 12 C 0.040 3.960 13 H 0.115 0.885 14 C -0.166 4.166 15 C -0.145 4.145 16 C -0.016 4.016 17 H 0.122 0.878 18 C 0.043 3.957 19 N -0.200 5.200 20 C -0.090 4.090 21 C -0.080 4.080 22 C -0.138 4.138 23 C -0.111 4.111 24 C -0.112 4.112 25 C -0.044 4.044 26 O -0.106 6.106 27 C -0.144 4.144 28 C -0.163 4.163 29 C -0.077 4.077 30 H 0.096 0.904 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.148 0.852 34 H 0.222 0.778 35 H -0.164 1.164 36 H -0.167 1.167 37 H 0.232 0.768 38 H 0.089 0.911 39 H 0.097 0.903 40 H 0.092 0.908 41 H 0.102 0.898 42 H 0.155 0.845 43 H 0.157 0.843 44 H 0.160 0.840 45 H 0.154 0.846 46 H 0.103 0.897 47 H 0.094 0.906 48 H 0.098 0.902 49 H 0.093 0.907 50 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 2.314 3.245 -2.303 4.604 hybrid contribution 0.080 -0.173 0.579 0.610 sum 2.394 3.072 -1.724 4.259 Atomic orbital electron populations 1.20631 0.88887 1.03544 1.02972 1.18688 0.98217 0.90685 1.02938 1.24366 0.98363 1.00794 1.11178 1.24589 1.05707 0.89882 0.95219 1.86680 1.29394 1.79629 1.37115 0.94699 0.80987 0.81788 0.85433 1.82874 1.03600 0.98979 1.69321 1.24486 0.98055 0.96483 1.18714 1.16918 0.81593 0.87405 0.76114 1.90873 1.81537 1.18042 1.49413 1.45922 1.05350 1.10171 1.76089 1.21103 0.86757 0.91059 0.97107 0.88498 1.21932 0.99388 0.98729 0.96570 1.21548 0.92049 0.99057 1.01864 1.19930 0.89538 0.92475 0.99654 0.87792 1.26402 0.84933 0.94972 0.89420 1.70596 1.22894 1.03725 1.22774 1.19916 0.91128 0.97166 1.00819 1.20376 0.96099 0.92402 0.99139 1.21112 0.93598 1.00636 0.98495 1.21081 1.00230 0.92652 0.97115 1.19930 0.91997 0.96863 1.02440 1.20349 0.96298 0.85787 1.01975 1.84507 1.27461 1.36637 1.61952 1.21525 0.99296 0.99469 0.94111 1.21813 0.93706 0.98550 1.02258 1.20729 0.90884 1.00129 0.95984 0.90370 0.90885 0.90921 0.85169 0.77830 1.16406 1.16717 0.76831 0.91145 0.90269 0.90786 0.89790 0.84532 0.84336 0.84042 0.84644 0.89685 0.90557 0.90157 0.90721 0.82506 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.18 9.48 36.01 0.34 0.52 16 2 C -0.09 0.00 5.78 -106.45 -0.62 -0.61 16 3 C -0.23 0.11 4.83 -35.86 -0.17 -0.06 16 4 C -0.04 0.05 2.77 36.00 0.10 0.15 16 5 O -0.52 -0.21 12.88 -35.23 -0.45 -0.66 16 6 Si 0.67 -1.24 32.13 -169.99 -5.46 -6.70 16 7 S 0.18 -0.20 20.83 -107.50 -2.24 -2.44 16 8 C -0.26 -0.28 6.45 -36.80 -0.24 -0.52 16 9 C 0.59 1.36 7.75 -12.90 -0.10 1.26 16 10 O -0.52 -3.05 16.50 5.18 0.09 -2.96 16 11 N -0.72 0.45 5.07 -55.14 -0.28 0.17 16 12 C 0.14 -0.13 2.46 -67.93 -0.17 -0.29 16 13 H 0.10 0.11 7.58 -51.93 -0.39 -0.28 16 14 C -0.13 0.13 5.50 -26.73 -0.15 -0.02 16 15 C -0.11 0.06 5.18 -26.74 -0.14 -0.08 16 16 C 0.00 0.00 2.66 -91.77 -0.24 -0.25 16 17 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 18 C 0.25 0.67 6.75 -13.09 -0.09 0.58 16 19 N -0.47 -2.06 11.32 -8.70 -0.10 -2.15 16 20 C 0.02 0.09 7.24 -84.71 -0.61 -0.52 16 21 C -0.06 -0.12 10.10 -39.28 -0.40 -0.52 16 22 C -0.12 0.00 10.02 -39.61 -0.40 -0.40 16 23 C -0.09 0.03 10.03 -39.52 -0.40 -0.37 16 24 C -0.09 -0.12 10.06 -39.54 -0.40 -0.51 16 25 C 0.01 0.02 7.43 -38.65 -0.29 -0.27 16 26 O -0.21 -0.79 10.77 3.61 0.04 -0.75 16 27 C -0.11 0.16 5.18 -26.74 -0.14 0.03 16 28 C -0.13 0.35 5.39 -26.74 -0.14 0.21 16 29 C -0.04 -0.05 9.78 -40.43 -0.40 -0.44 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.07 -0.15 8.10 -51.93 -0.42 -0.57 16 32 H 0.07 -0.13 7.00 -51.93 -0.36 -0.49 16 33 H 0.13 -0.26 6.25 -51.93 -0.32 -0.59 16 34 H 0.37 -0.89 8.70 45.56 0.40 -0.50 16 35 H -0.24 -0.23 7.11 56.52 0.40 0.17 16 36 H -0.24 0.14 7.11 56.52 0.40 0.54 16 37 H 0.40 -1.09 7.71 -40.82 -0.31 -1.41 16 38 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 39 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 40 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 41 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 42 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 43 H 0.14 -0.35 8.06 -52.49 -0.42 -0.78 16 44 H 0.14 -0.43 8.06 -52.49 -0.42 -0.85 16 45 H 0.14 -0.10 8.06 -52.49 -0.42 -0.53 16 46 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 47 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 48 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 49 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 50 H 0.16 0.13 8.06 -52.48 -0.42 -0.29 16 LS Contribution 425.58 15.07 6.41 6.41 Total: 0.00 -8.98 425.58 -13.59 -22.58 By element: Atomic # 1 Polarization: -4.40 SS G_CDS: -6.96 Total: -11.36 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: -4.64 Total: -2.12 kcal Atomic # 7 Polarization: -1.61 SS G_CDS: -0.38 Total: -1.99 kcal Atomic # 8 Polarization: -4.05 SS G_CDS: -0.33 Total: -4.38 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.46 Total: -6.70 kcal Atomic # 16 Polarization: -0.20 SS G_CDS: -2.24 Total: -2.44 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -8.98 -13.59 -22.58 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13774298_6739946.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.363 kcal (2) G-P(sol) polarization free energy of solvation -8.985 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds