Wall clock time and date at job start Sat Mar 6 2021 23:31:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.35536 * 125.67427 * 2 1 4 4 C 1.35457 * 108.87079 * 180.02562 * 3 2 1 5 5 C 1.50698 * 126.06746 * 180.02562 * 4 3 2 6 6 O 1.42905 * 109.47026 * 244.97693 * 5 4 3 7 7 Si 1.86300 * 109.47230 * 4.97714 * 5 4 3 8 8 C 1.39838 * 107.86191 * 359.74647 * 4 3 2 9 9 C 1.37656 * 125.68121 * 180.02562 * 2 1 3 10 10 C 1.46678 * 126.23203 * 359.97017 * 9 2 1 11 11 O 1.21694 * 119.99762 * 4.97423 * 10 9 2 12 12 N 1.34773 * 119.99895 * 184.97470 * 10 9 2 13 13 C 1.46499 * 120.00069 * 174.36644 * 12 10 9 14 14 H 1.09001 * 109.46974 * 325.00055 * 13 12 10 15 15 C 1.53000 * 109.47102 * 84.99526 * 13 12 10 16 16 C 1.53000 * 109.46784 * 60.00339 * 15 13 12 17 17 C 1.53002 * 109.47390 * 59.99935 * 16 15 13 18 18 H 1.09003 * 109.47265 * 59.99867 * 17 16 15 19 19 C 1.50695 * 109.47061 * 179.97438 * 17 16 15 20 20 N 1.30111 * 124.94437 * 214.96996 * 19 17 16 21 21 C 1.35786 * 109.64703 * 180.02562 * 20 19 17 22 22 C 1.39698 * 133.60393 * 179.71268 * 21 20 19 23 23 C 1.36640 * 119.88381 * 179.87263 * 22 21 20 24 24 C 1.38731 * 120.67110 * 0.45264 * 23 22 21 25 25 C 1.37894 * 120.44963 * 359.77093 * 24 23 22 26 26 C 1.38794 * 119.69306 * 0.02562 * 25 24 23 27 27 N 1.36037 * 124.94957 * 35.00144 * 19 17 16 28 28 C 1.53003 * 109.47045 * 300.00142 * 17 16 15 29 29 C 1.52998 * 109.47419 * 204.99996 * 13 12 10 30 30 H 1.09002 * 109.46633 * 264.20006 * 1 2 3 31 31 H 1.08993 * 109.47462 * 24.19891 * 1 2 3 32 32 H 1.08998 * 109.47433 * 144.20841 * 1 2 3 33 33 H 1.08003 * 125.56449 * 0.02562 * 3 2 1 34 34 H 1.09002 * 109.47004 * 124.97717 * 5 4 3 35 35 H 0.96698 * 113.99517 * 179.97438 * 6 5 4 36 36 H 1.48501 * 110.00136 * 178.68033 * 7 5 4 37 37 H 1.48500 * 110.00002 * 300.00443 * 7 5 4 38 38 H 1.08001 * 126.45344 * 180.26021 * 8 4 3 39 39 H 0.96998 * 119.99897 * 354.36849 * 12 10 9 40 40 H 1.09003 * 109.47058 * 179.97438 * 15 13 12 41 41 H 1.08995 * 109.47227 * 300.00247 * 15 13 12 42 42 H 1.09003 * 109.47025 * 299.99655 * 16 15 13 43 43 H 1.09001 * 109.47071 * 179.97438 * 16 15 13 44 44 H 1.08002 * 120.06106 * 0.32463 * 22 21 20 45 45 H 1.08004 * 119.66842 * 180.22030 * 23 22 21 46 46 H 1.07995 * 119.77875 * 179.78793 * 24 23 22 47 47 H 1.08002 * 120.15756 * 179.97438 * 25 24 23 48 48 H 0.96995 * 126.34765 * 359.95489 * 27 19 17 49 49 H 1.08995 * 109.47063 * 179.97438 * 28 17 16 50 50 H 1.09003 * 109.46864 * 299.99970 * 28 17 16 51 51 H 1.08994 * 109.47244 * 179.97438 * 29 13 12 52 52 H 1.09003 * 109.46787 * 59.99668 * 29 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7094 -0.0006 5 6 4.7536 1.6191 -0.0002 6 8 5.4771 1.4531 -1.2214 7 14 4.1926 3.3889 0.1535 8 6 3.5780 -0.6887 0.0049 9 6 2.2679 -1.1181 -0.0005 10 6 1.8125 -2.5124 -0.0005 11 8 0.6255 -2.7648 -0.0914 12 7 2.7087 -3.5140 0.1002 13 6 2.2483 -4.8992 0.2245 14 1 1.3298 -4.9255 0.8109 15 6 1.9811 -5.4747 -1.1677 16 6 3.2703 -5.4378 -1.9908 17 6 4.3457 -6.2719 -1.2918 18 1 4.0032 -7.3026 -1.1993 19 6 5.6153 -6.2360 -2.1029 20 7 6.4512 -7.2258 -2.2229 21 6 7.4851 -6.8560 -3.0218 22 6 8.6363 -7.5074 -3.4711 23 6 9.5118 -6.8540 -4.2918 24 6 9.2752 -5.5428 -4.6785 25 6 8.1479 -4.8785 -4.2435 26 6 7.2451 -5.5275 -3.4127 27 7 6.0546 -5.1639 -2.8157 28 6 4.6128 -5.6964 0.1004 29 6 3.3236 -5.7334 0.9235 30 1 -0.3633 -0.1039 1.0225 31 1 -0.3634 0.9373 -0.4212 32 1 -0.3634 -0.8336 -0.6010 33 1 1.9080 2.1237 0.0004 34 1 5.3991 1.3681 0.8415 35 1 6.2649 2.0095 -1.2905 36 1 5.3696 4.2938 0.1871 37 1 3.3116 3.7435 -0.9882 38 1 4.4584 -1.3142 0.0099 39 1 3.6586 -3.3177 0.0904 40 1 1.6389 -6.5055 -1.0752 41 1 1.2149 -4.8805 -1.6656 42 1 3.6129 -4.4071 -2.0833 43 1 3.0801 -5.8482 -2.9825 44 1 8.8303 -8.5281 -3.1763 45 1 10.3989 -7.3621 -4.6401 46 1 9.9786 -5.0390 -5.3248 47 1 7.9686 -3.8577 -4.5471 48 1 5.6133 -4.3034 -2.8905 49 1 5.3787 -6.2909 0.5985 50 1 4.9554 -4.6658 0.0079 51 1 2.9808 -6.7638 1.0164 52 1 3.5139 -5.3232 1.9154 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13813120_10803934.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:31:52 Heat of formation + Delta-G solvation = 52.887111 kcal Electronic energy + Delta-G solvation = -35250.770852 eV Core-core repulsion = 30796.850486 eV Total energy + Delta-G solvation = -4453.920366 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.184 amu Computer time = 1.89 seconds Orbital eigenvalues (eV) -43.25556 -42.56313 -40.96087 -39.20184 -38.10258 -37.77188 -35.19781 -34.21299 -33.95763 -32.28596 -31.92454 -30.93171 -30.58700 -29.27485 -28.32753 -25.73237 -25.04078 -24.01587 -23.78057 -23.33626 -22.77313 -21.66300 -21.28132 -20.54811 -20.10081 -18.92359 -18.77281 -18.40202 -18.08298 -17.26760 -16.83445 -16.76074 -16.68141 -16.33168 -16.02905 -15.83658 -15.42859 -15.27922 -15.21930 -15.04182 -14.91040 -14.84591 -14.83175 -14.37346 -14.04543 -13.82445 -13.59217 -13.52614 -13.36638 -13.29523 -13.22299 -13.10835 -12.86969 -12.68360 -12.52841 -12.52043 -12.23319 -11.94700 -11.82803 -11.82212 -11.46205 -11.32276 -11.11159 -11.03242 -10.36505 -10.17909 -9.70199 -9.38486 -9.27060 -9.14933 -4.88101 -0.05103 0.40138 0.51168 1.35178 1.52551 1.57496 1.66906 1.72650 1.86447 2.00823 2.29157 2.32568 2.86512 2.93402 3.48351 3.53668 3.60936 3.67475 3.71483 3.89359 3.92859 3.95465 3.99000 4.12363 4.13689 4.14396 4.20705 4.32246 4.35913 4.36911 4.39070 4.39560 4.42938 4.44611 4.47849 4.60506 4.63034 4.71414 4.75970 4.78464 4.87263 4.96289 4.99961 5.09265 5.10536 5.11946 5.18290 5.23750 5.28245 5.40737 5.47500 5.51073 5.55724 5.65827 5.88683 5.91939 6.13808 6.35324 6.45546 6.68443 6.84288 7.12367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.412 5.412 3 C 0.030 3.970 4 C -0.180 4.180 5 C -0.047 4.047 6 O -0.560 6.560 7 Si 0.760 3.240 8 C -0.115 4.115 9 C -0.076 4.076 10 C 0.589 3.411 11 O -0.578 6.578 12 N -0.701 5.701 13 C 0.150 3.850 14 H 0.082 0.918 15 C -0.123 4.123 16 C -0.108 4.108 17 C -0.004 4.004 18 H 0.111 0.889 19 C 0.297 3.703 20 N -0.529 5.529 21 C 0.014 3.986 22 C -0.089 4.089 23 C -0.125 4.125 24 C -0.104 4.104 25 C -0.118 4.118 26 C 0.031 3.969 27 N -0.587 5.587 28 C -0.106 4.106 29 C -0.116 4.116 30 H 0.085 0.915 31 H 0.110 0.890 32 H 0.083 0.917 33 H 0.195 0.805 34 H 0.089 0.911 35 H 0.391 0.609 36 H -0.291 1.291 37 H -0.295 1.295 38 H 0.156 0.844 39 H 0.409 0.591 40 H 0.091 0.909 41 H 0.056 0.944 42 H 0.066 0.934 43 H 0.065 0.935 44 H 0.129 0.871 45 H 0.152 0.848 46 H 0.157 0.843 47 H 0.143 0.857 48 H 0.432 0.568 49 H 0.074 0.926 50 H 0.069 0.931 51 H 0.099 0.901 52 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.850 4.420 3.187 5.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.084 5.084 3 C -0.107 4.107 4 C -0.186 4.186 5 C -0.156 4.156 6 O -0.370 6.370 7 Si 0.666 3.334 8 C -0.141 4.141 9 C -0.189 4.189 10 C 0.378 3.622 11 O -0.460 6.460 12 N -0.353 5.353 13 C 0.046 3.954 14 H 0.100 0.900 15 C -0.162 4.162 16 C -0.146 4.146 17 C -0.024 4.024 18 H 0.129 0.871 19 C 0.030 3.970 20 N -0.250 5.250 21 C -0.104 4.104 22 C -0.109 4.109 23 C -0.145 4.145 24 C -0.123 4.123 25 C -0.139 4.139 26 C -0.079 4.079 27 N -0.200 5.200 28 C -0.145 4.145 29 C -0.154 4.154 30 H 0.104 0.896 31 H 0.128 0.872 32 H 0.102 0.898 33 H 0.211 0.789 34 H 0.107 0.893 35 H 0.241 0.759 36 H -0.218 1.218 37 H -0.223 1.223 38 H 0.174 0.826 39 H 0.247 0.753 40 H 0.109 0.891 41 H 0.075 0.925 42 H 0.084 0.916 43 H 0.084 0.916 44 H 0.147 0.853 45 H 0.170 0.830 46 H 0.175 0.825 47 H 0.160 0.840 48 H 0.273 0.727 49 H 0.093 0.907 50 H 0.087 0.913 51 H 0.117 0.883 52 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -0.909 3.682 3.045 4.864 hybrid contribution 1.265 1.057 -1.348 2.129 sum 0.355 4.739 1.697 5.046 Atomic orbital electron populations 1.22396 0.74726 1.05660 1.04791 1.43995 1.07660 1.04750 1.51983 1.22220 0.89939 0.92468 1.06040 1.18865 0.92863 0.94122 1.12769 1.24222 0.93587 1.09130 0.88689 1.86554 1.43787 1.67278 1.39341 0.94373 0.80682 0.71923 0.86467 1.21370 0.94396 0.94981 1.03352 1.20150 0.90775 0.87839 1.20145 1.17101 0.85415 0.84025 0.75672 1.90788 1.17617 1.85302 1.52263 1.45711 1.09813 1.05899 1.73857 1.21034 0.98474 0.79419 0.96508 0.89968 1.21844 0.96634 1.02490 0.95209 1.21514 0.94465 0.99616 0.99021 1.19959 0.86111 1.03310 0.93021 0.87088 1.23917 0.97048 0.82160 0.93896 1.70374 1.04386 1.29033 1.21232 1.19478 0.97028 0.93113 1.00772 1.20284 0.91921 1.00460 0.98224 1.21014 1.00105 0.95414 0.98015 1.21315 0.96701 0.94705 0.99616 1.20333 0.93990 1.00947 0.98587 1.19157 0.90386 0.96641 1.01712 1.42978 1.19268 1.15873 1.41857 1.21546 0.98619 1.01373 0.92923 1.21800 0.93076 1.01616 0.98916 0.89598 0.87157 0.89788 0.78879 0.89340 0.75916 1.21798 1.22283 0.82642 0.75321 0.89079 0.92514 0.91570 0.91605 0.85276 0.83024 0.82539 0.83954 0.72673 0.90705 0.91275 0.88287 0.89533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.08 10.48 127.77 1.34 1.26 16 2 N -0.41 -0.92 3.16 -534.32 -1.69 -2.61 16 3 C 0.03 0.00 9.92 83.48 0.83 0.83 16 4 C -0.18 -0.21 5.46 -20.12 -0.11 -0.32 16 5 C -0.05 0.09 3.01 71.24 0.21 0.30 16 6 O -0.56 -0.55 12.86 -148.98 -1.92 -2.47 16 7 Si 0.76 -2.70 30.60 68.60 2.10 -0.60 16 8 C -0.11 -0.15 10.29 22.57 0.23 0.09 16 9 C -0.08 -0.27 6.89 40.35 0.28 0.01 16 10 C 0.59 2.48 7.73 86.45 0.67 3.15 16 11 O -0.58 -5.92 14.43 -4.33 -0.06 -5.98 16 12 N -0.70 1.63 4.22 -446.51 -1.88 -0.26 16 13 C 0.15 -0.51 2.74 44.99 0.12 -0.39 16 14 H 0.08 -0.02 7.66 -2.39 -0.02 -0.03 16 15 C -0.12 0.35 5.60 30.59 0.17 0.52 16 16 C -0.11 0.39 4.77 30.59 0.15 0.54 16 17 C 0.00 0.01 2.66 -11.54 -0.03 -0.02 16 18 H 0.11 -0.23 8.14 -2.39 -0.02 -0.25 16 19 C 0.30 1.18 6.82 137.92 0.94 2.12 16 20 N -0.53 -5.77 11.27 -179.97 -2.03 -7.80 16 21 C 0.01 0.14 7.23 39.45 0.29 0.43 16 22 C -0.09 -0.66 10.05 22.25 0.22 -0.43 16 23 C -0.13 -0.31 9.96 22.01 0.22 -0.09 16 24 C -0.10 -0.09 10.03 22.31 0.22 0.13 16 25 C -0.12 -0.29 10.07 22.32 0.22 -0.07 16 26 C 0.03 0.20 7.31 38.86 0.28 0.48 16 27 N -0.59 -1.13 5.97 -179.23 -1.07 -2.20 16 28 C -0.11 0.59 5.02 30.60 0.15 0.74 16 29 C -0.12 0.84 5.61 30.59 0.17 1.01 16 30 H 0.09 -0.22 8.14 -2.39 -0.02 -0.24 16 31 H 0.11 -0.73 8.12 -2.39 -0.02 -0.75 16 32 H 0.08 0.25 6.55 -2.39 -0.02 0.23 16 33 H 0.19 -1.09 6.21 -2.91 -0.02 -1.11 16 34 H 0.09 -0.47 7.96 -2.39 -0.02 -0.48 16 35 H 0.39 -2.60 8.74 -74.06 -0.65 -3.25 16 36 H -0.29 -0.36 7.11 99.48 0.71 0.34 16 37 H -0.30 -0.94 7.11 99.48 0.71 -0.23 16 38 H 0.16 -0.46 7.45 -2.91 -0.02 -0.48 16 39 H 0.41 -2.46 5.77 -92.71 -0.53 -2.99 16 40 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 41 H 0.06 0.12 8.07 -2.39 -0.02 0.10 16 42 H 0.07 -0.29 6.83 -2.39 -0.02 -0.31 16 43 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 44 H 0.13 0.74 8.06 -2.91 -0.02 0.71 16 45 H 0.15 -0.43 8.06 -2.91 -0.02 -0.45 16 46 H 0.16 -0.77 8.06 -2.91 -0.02 -0.79 16 47 H 0.14 -0.33 8.06 -2.91 -0.02 -0.35 16 48 H 0.43 -1.55 8.09 -92.71 -0.75 -2.30 16 49 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 50 H 0.07 -0.49 6.51 -2.39 -0.02 -0.50 16 51 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 52 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 Total: 0.00 -26.32 415.55 -0.87 -27.20 By element: Atomic # 1 Polarization: -14.66 SS G_CDS: -0.91 Total: -15.57 kcal Atomic # 6 Polarization: 3.70 SS G_CDS: 6.59 Total: 10.28 kcal Atomic # 7 Polarization: -6.19 SS G_CDS: -6.67 Total: -12.86 kcal Atomic # 8 Polarization: -6.48 SS G_CDS: -1.98 Total: -8.45 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: 2.10 Total: -0.60 kcal Total: -26.32 -0.87 -27.20 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13813120_10803934.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.087 kcal (2) G-P(sol) polarization free energy of solvation -26.325 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.762 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.874 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.199 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.89 seconds