Wall clock time and date at job start Sat Mar 6 2021 23:31:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37661 * 125.67616 * 2 1 4 4 C 1.46671 * 126.22934 * 0.02562 * 3 2 1 5 5 O 1.21695 * 120.00490 * 5.29112 * 4 3 2 6 6 N 1.34784 * 120.00082 * 185.29359 * 4 3 2 7 7 C 1.46500 * 120.00358 * 174.96079 * 6 4 3 8 8 H 1.09000 * 109.46503 * 324.99646 * 7 6 4 9 9 C 1.52998 * 109.47219 * 84.99297 * 7 6 4 10 10 C 1.53002 * 109.46864 * 60.00179 * 9 7 6 11 11 C 1.53007 * 109.47116 * 60.00016 * 10 9 7 12 12 H 1.08990 * 109.47423 * 59.99654 * 11 10 9 13 13 C 1.50693 * 109.46907 * 180.02562 * 11 10 9 14 14 N 1.30110 * 124.94373 * 214.96946 * 13 11 10 15 15 C 1.35786 * 109.64547 * 180.02562 * 14 13 11 16 16 C 1.39707 * 133.60804 * 180.02562 * 15 14 13 17 17 C 1.36635 * 119.88527 * 179.35744 * 16 15 14 18 18 C 1.38729 * 120.67427 * 0.47243 * 17 16 15 19 19 C 1.37896 * 120.44839 * 359.70398 * 18 17 16 20 20 C 1.38796 * 119.68786 * 359.97438 * 19 18 17 21 21 N 1.36036 * 124.95214 * 34.99671 * 13 11 10 22 22 C 1.53000 * 109.46885 * 299.99653 * 11 10 9 23 23 C 1.52998 * 109.47064 * 204.99688 * 7 6 4 24 24 C 1.37860 * 107.53233 * 180.28085 * 3 2 1 25 25 C 1.39841 * 107.08944 * 359.58665 * 24 3 2 26 26 C 1.35448 * 107.86034 * 0.41380 * 25 24 3 27 27 C 1.50705 * 125.56514 * 179.70575 * 26 25 24 28 28 O 1.42891 * 109.47152 * 150.04147 * 27 26 25 29 29 Si 1.86301 * 109.46870 * 30.04355 * 27 26 25 30 30 H 1.09001 * 109.47012 * 95.79283 * 1 2 3 31 31 H 1.09000 * 109.46918 * 215.78457 * 1 2 3 32 32 H 1.09003 * 109.47550 * 335.78990 * 1 2 3 33 33 H 0.97000 * 119.99619 * 354.95184 * 6 4 3 34 34 H 1.08997 * 109.46795 * 179.97438 * 9 7 6 35 35 H 1.08998 * 109.47258 * 300.00018 * 9 7 6 36 36 H 1.08994 * 109.47188 * 300.00071 * 10 9 7 37 37 H 1.09002 * 109.46964 * 179.97438 * 10 9 7 38 38 H 1.08000 * 120.05326 * 359.93434 * 16 15 14 39 39 H 1.08005 * 119.66389 * 180.15372 * 17 16 15 40 40 H 1.08000 * 119.77800 * 179.68965 * 18 17 16 41 41 H 1.07994 * 120.15950 * 180.02562 * 19 18 17 42 42 H 0.97002 * 126.34823 * 359.96151 * 21 13 11 43 43 H 1.08997 * 109.47087 * 179.97438 * 22 11 10 44 44 H 1.09001 * 109.47500 * 300.00406 * 22 11 10 45 45 H 1.08990 * 109.47252 * 179.97438 * 23 7 6 46 46 H 1.09002 * 109.47035 * 59.99620 * 23 7 6 47 47 H 1.08002 * 126.45800 * 179.69990 * 24 3 2 48 48 H 1.08003 * 126.06807 * 180.14057 * 25 24 3 49 49 H 1.09002 * 109.47036 * 270.04804 * 27 26 25 50 50 H 0.96697 * 114.00750 * 299.99995 * 28 27 26 51 51 H 1.48493 * 110.00173 * 180.02562 * 29 27 26 52 52 H 1.48501 * 109.99957 * 301.32004 * 29 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1183 0.0000 4 6 1.8123 2.5124 0.0005 5 8 0.6258 2.7650 0.0982 6 7 2.7077 3.5141 -0.1072 7 6 2.2466 4.9002 -0.2179 8 1 1.3202 4.9301 -0.7915 9 6 1.9990 5.4685 1.1809 10 6 3.2994 5.4264 1.9860 11 6 4.3657 6.2636 1.2767 12 1 4.0227 7.2948 1.1943 13 6 5.6466 6.2215 2.0694 14 7 6.4853 7.2097 2.1833 15 6 7.5300 6.8340 2.9652 16 6 8.6856 7.4833 3.4065 17 6 9.5675 6.8269 4.2180 18 6 9.3334 5.5148 4.6028 19 6 8.2013 4.8529 4.1764 20 6 7.2908 5.5057 3.3571 21 7 6.0948 5.1448 2.7696 22 6 4.6133 5.6951 -0.1220 23 6 3.3129 5.7373 -0.9272 24 6 3.5779 0.6890 -0.0064 25 6 3.5522 -0.7092 -0.0007 26 6 2.2556 -1.1009 -0.0004 27 6 1.7709 -2.5279 -0.0012 28 8 0.5129 -2.6041 0.6721 29 14 3.0115 -3.6054 0.8767 30 1 -0.3633 -0.1037 -1.0224 31 1 -0.3633 -0.8337 0.6009 32 1 -0.3634 0.9373 0.4214 33 1 3.6575 3.3171 -0.1114 34 1 1.6564 6.4999 1.0985 35 1 1.2393 4.8722 1.6861 36 1 3.6425 4.3951 2.0683 37 1 3.1231 5.8317 2.9824 38 1 8.8769 8.5053 3.1144 39 1 10.4585 7.3331 4.5591 40 1 10.0426 5.0082 5.2406 41 1 8.0235 3.8316 4.4792 42 1 5.6536 4.2842 2.8457 43 1 5.3726 6.2918 -0.6275 44 1 4.9564 4.6638 -0.0397 45 1 2.9697 6.7684 -1.0099 46 1 3.4893 5.3323 -1.9237 47 1 4.4582 1.3146 -0.0127 48 1 4.4133 -1.3610 -0.0013 49 1 1.6544 -2.8714 -1.0291 50 1 0.5418 -2.3132 1.5938 51 1 2.5456 -5.0154 0.8822 52 1 4.3324 -3.5101 0.2050 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13813120_10803936.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:31:57 Heat of formation + Delta-G solvation = 53.997784 kcal Electronic energy + Delta-G solvation = -35163.503101 eV Core-core repulsion = 30709.630898 eV Total energy + Delta-G solvation = -4453.872203 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.184 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -43.21913 -42.63245 -40.98945 -39.21705 -38.07595 -37.78838 -35.18531 -34.17728 -33.77795 -32.31614 -31.90752 -30.97549 -30.86430 -29.33072 -27.52604 -26.79263 -24.84752 -23.87217 -23.42371 -23.30038 -22.75180 -21.79810 -21.51594 -20.58493 -20.14433 -18.94749 -18.88138 -18.18551 -18.01261 -17.08986 -16.85583 -16.77990 -16.43614 -16.21694 -16.15559 -15.71716 -15.48515 -15.33582 -15.19691 -15.00064 -14.91536 -14.83287 -14.79787 -14.50891 -14.39719 -13.82318 -13.71096 -13.49730 -13.33160 -13.27630 -13.19471 -13.00590 -12.83405 -12.64869 -12.49124 -12.21771 -12.19242 -12.03498 -11.80518 -11.78448 -11.44341 -11.30728 -11.11901 -10.98974 -10.65299 -10.17015 -9.77743 -9.34472 -9.12505 -9.11196 -4.92953 -0.01289 0.35932 0.54936 1.17132 1.48835 1.72428 1.74720 1.76584 1.90515 2.02739 2.32543 2.36744 2.90222 2.96663 3.27105 3.51676 3.54480 3.62827 3.69758 3.73930 3.91823 3.96862 3.99258 4.14215 4.17566 4.24079 4.30351 4.32481 4.34384 4.38733 4.40164 4.41160 4.46092 4.47435 4.51267 4.52913 4.63276 4.77364 4.81440 4.90090 4.97117 5.01839 5.02549 5.10161 5.11581 5.14149 5.15211 5.25680 5.29609 5.44151 5.48774 5.54641 5.59684 5.70651 5.95659 5.96576 6.11054 6.41348 6.47021 6.55290 6.88665 7.13859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.400 5.400 3 C -0.077 4.077 4 C 0.588 3.412 5 O -0.581 6.581 6 N -0.698 5.698 7 C 0.149 3.851 8 H 0.077 0.923 9 C -0.123 4.123 10 C -0.107 4.107 11 C -0.004 4.004 12 H 0.108 0.892 13 C 0.298 3.702 14 N -0.532 5.532 15 C 0.012 3.988 16 C -0.091 4.091 17 C -0.126 4.126 18 C -0.105 4.105 19 C -0.115 4.115 20 C 0.033 3.967 21 N -0.585 5.585 22 C -0.106 4.106 23 C -0.117 4.117 24 C -0.127 4.127 25 C -0.213 4.213 26 C 0.013 3.987 27 C -0.058 4.058 28 O -0.553 6.553 29 Si 0.811 3.189 30 H 0.063 0.937 31 H 0.118 0.882 32 H 0.090 0.910 33 H 0.411 0.589 34 H 0.088 0.912 35 H 0.057 0.943 36 H 0.071 0.929 37 H 0.067 0.933 38 H 0.126 0.874 39 H 0.150 0.850 40 H 0.157 0.843 41 H 0.147 0.853 42 H 0.434 0.566 43 H 0.073 0.927 44 H 0.073 0.927 45 H 0.096 0.904 46 H 0.083 0.917 47 H 0.170 0.830 48 H 0.160 0.840 49 H 0.112 0.888 50 H 0.396 0.604 51 H -0.296 1.296 52 H -0.274 1.274 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.029 -3.013 2.664 5.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.073 5.073 3 C -0.191 4.191 4 C 0.377 3.623 5 O -0.463 6.463 6 N -0.351 5.351 7 C 0.045 3.955 8 H 0.095 0.905 9 C -0.161 4.161 10 C -0.145 4.145 11 C -0.024 4.024 12 H 0.126 0.874 13 C 0.030 3.970 14 N -0.253 5.253 15 C -0.105 4.105 16 C -0.111 4.111 17 C -0.146 4.146 18 C -0.124 4.124 19 C -0.136 4.136 20 C -0.077 4.077 21 N -0.197 5.197 22 C -0.144 4.144 23 C -0.155 4.155 24 C -0.153 4.153 25 C -0.237 4.237 26 C -0.105 4.105 27 C -0.166 4.166 28 O -0.361 6.361 29 Si 0.714 3.286 30 H 0.081 0.919 31 H 0.136 0.864 32 H 0.109 0.891 33 H 0.249 0.751 34 H 0.106 0.894 35 H 0.076 0.924 36 H 0.090 0.910 37 H 0.085 0.915 38 H 0.144 0.856 39 H 0.168 0.832 40 H 0.175 0.825 41 H 0.165 0.835 42 H 0.276 0.724 43 H 0.091 0.909 44 H 0.091 0.909 45 H 0.115 0.885 46 H 0.102 0.898 47 H 0.187 0.813 48 H 0.178 0.822 49 H 0.129 0.871 50 H 0.246 0.754 51 H -0.223 1.223 52 H -0.200 1.200 Dipole moment (debyes) X Y Z Total from point charges 2.096 -2.803 1.711 3.896 hybrid contribution -0.217 -0.735 -0.384 0.857 sum 1.879 -3.538 1.327 4.220 Atomic orbital electron populations 1.22583 0.75672 1.06367 1.03974 1.43909 1.07154 1.04392 1.51850 1.20235 0.91274 0.87501 1.20070 1.17154 0.85364 0.84135 0.75637 1.90771 1.17888 1.85242 1.52416 1.45678 1.09881 1.05675 1.73824 1.21012 0.98336 0.79519 0.96604 0.90454 1.21832 0.96841 1.02374 0.95095 1.21513 0.94164 0.99857 0.98954 1.19945 0.86047 1.03255 0.93181 0.87371 1.23867 0.96950 0.82123 0.94035 1.70371 1.04136 1.29278 1.21533 1.19470 0.96811 0.93268 1.00970 1.20269 0.92039 1.00392 0.98392 1.21003 1.00024 0.95527 0.98091 1.21322 0.96849 0.94622 0.99639 1.20349 0.93631 1.01039 0.98541 1.19139 0.90268 0.96535 1.01758 1.42936 1.18695 1.15700 1.42414 1.21542 0.98316 1.01622 0.92935 1.21795 0.93288 1.01478 0.98940 1.21587 0.94449 0.95422 1.03883 1.20893 0.95286 0.95820 1.11652 1.21362 0.91175 0.89464 1.08542 1.25198 0.94577 0.94295 1.02568 1.86453 1.30235 1.88877 1.30557 0.92990 0.73524 0.74081 0.88023 0.91852 0.86367 0.89101 0.75090 0.89352 0.92390 0.91002 0.91454 0.85558 0.83244 0.82523 0.83492 0.72411 0.90869 0.90866 0.88518 0.89816 0.81260 0.82240 0.87104 0.75378 1.22321 1.19976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.13 10.32 127.77 1.32 1.44 16 2 N -0.40 -1.12 3.16 -519.72 -1.64 -2.76 16 3 C -0.08 -0.18 6.88 40.34 0.28 0.10 16 4 C 0.59 2.00 7.73 86.44 0.67 2.67 16 5 O -0.58 -6.02 14.21 -4.33 -0.06 -6.08 16 6 N -0.70 2.57 4.22 -446.50 -1.88 0.68 16 7 C 0.15 -0.60 2.74 44.99 0.12 -0.48 16 8 H 0.08 0.01 7.65 -2.39 -0.02 -0.01 16 9 C -0.12 0.49 5.60 30.59 0.17 0.66 16 10 C -0.11 0.60 4.78 30.60 0.15 0.75 16 11 C 0.00 0.02 2.66 -11.54 -0.03 -0.01 16 12 H 0.11 -0.32 8.14 -2.39 -0.02 -0.34 16 13 C 0.30 0.65 6.81 137.92 0.94 1.59 16 14 N -0.53 -5.15 11.27 -179.97 -2.03 -7.18 16 15 C 0.01 0.11 7.23 39.45 0.29 0.40 16 16 C -0.09 -0.59 10.05 22.25 0.22 -0.36 16 17 C -0.13 -0.18 9.96 22.01 0.22 0.04 16 18 C -0.10 0.08 10.03 22.31 0.22 0.30 16 19 C -0.11 -0.02 10.07 22.32 0.22 0.21 16 20 C 0.03 0.14 7.31 38.86 0.28 0.42 16 21 N -0.58 0.41 5.97 -179.23 -1.07 -0.66 16 22 C -0.11 0.71 5.01 30.60 0.15 0.87 16 23 C -0.12 0.89 5.61 30.59 0.17 1.06 16 24 C -0.13 0.28 10.35 22.57 0.23 0.51 16 25 C -0.21 0.34 9.37 22.01 0.21 0.54 16 26 C 0.01 0.00 6.14 41.34 0.25 0.25 16 27 C -0.06 0.14 2.99 71.24 0.21 0.36 16 28 O -0.55 1.55 10.11 -148.98 -1.51 0.04 16 29 Si 0.81 -4.21 31.29 68.60 2.15 -2.06 16 30 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 31 H 0.12 -0.19 5.25 -2.39 -0.01 -0.20 16 32 H 0.09 0.50 5.91 -2.39 -0.01 0.48 16 33 H 0.41 -3.42 5.77 -92.71 -0.53 -3.96 16 34 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 35 H 0.06 0.04 8.09 -2.39 -0.02 0.02 16 36 H 0.07 -0.54 6.82 -2.39 -0.02 -0.55 16 37 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 38 H 0.13 0.66 8.06 -2.91 -0.02 0.64 16 39 H 0.15 -0.52 8.06 -2.91 -0.02 -0.55 16 40 H 0.16 -1.01 8.06 -2.91 -0.02 -1.04 16 41 H 0.15 -0.79 8.06 -2.91 -0.02 -0.81 16 42 H 0.43 -3.13 8.09 -92.71 -0.75 -3.88 16 43 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 44 H 0.07 -0.67 6.51 -2.39 -0.02 -0.68 16 45 H 0.10 -0.83 8.14 -2.39 -0.02 -0.85 16 46 H 0.08 -0.66 8.14 -2.39 -0.02 -0.68 16 47 H 0.17 -1.47 7.45 -2.91 -0.02 -1.49 16 48 H 0.16 -0.73 6.63 -2.91 -0.02 -0.75 16 49 H 0.11 -0.12 7.96 -2.39 -0.02 -0.14 16 50 H 0.40 -3.95 8.31 -74.06 -0.62 -4.57 16 51 H -0.30 -0.60 7.11 99.48 0.71 0.11 16 52 H -0.27 0.42 6.76 99.48 0.67 1.09 16 Total: 0.00 -25.11 409.43 -0.65 -25.75 By element: Atomic # 1 Polarization: -18.14 SS G_CDS: -0.91 Total: -19.05 kcal Atomic # 6 Polarization: 5.00 SS G_CDS: 6.31 Total: 11.31 kcal Atomic # 7 Polarization: -3.29 SS G_CDS: -6.63 Total: -9.91 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -1.57 Total: -6.04 kcal Atomic # 14 Polarization: -4.21 SS G_CDS: 2.15 Total: -2.06 kcal Total: -25.11 -0.65 -25.75 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13813120_10803936.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.752 kcal (2) G-P(sol) polarization free energy of solvation -25.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.647 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.754 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.998 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds