Wall clock time and date at job start Sun Mar 7 2021 00:20:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 C 1.53006 * 109.47127 * 120.00347 * 2 1 3 5 5 O 1.45206 * 109.47226 * 239.99648 * 2 1 3 6 6 C 1.34644 * 116.99182 * 60.00595 * 5 2 1 7 7 O 1.21507 * 120.00513 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99419 * 180.02562 * 6 5 2 9 9 C 1.46497 * 119.99707 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.85338 * 336.18656 * 9 8 6 11 11 C 1.53781 * 113.61842 * 107.49856 * 9 8 6 12 12 C 1.53787 * 87.08000 * 89.11557 * 11 9 8 13 13 H 1.09006 * 113.61416 * 270.88429 * 12 11 9 14 14 N 1.46499 * 113.69243 * 139.99482 * 12 11 9 15 15 C 1.34777 * 120.00152 * 107.45958 * 14 12 11 16 16 O 1.21698 * 119.99920 * 0.02562 * 15 14 12 17 17 C 1.46674 * 120.00070 * 179.97438 * 15 14 12 18 18 C 1.37867 * 126.23386 * 179.97438 * 17 15 14 19 19 C 1.39835 * 107.08908 * 180.02562 * 18 17 15 20 20 C 1.50702 * 126.07348 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.46978 * 300.00573 * 20 19 18 22 22 Si 1.86294 * 109.47455 * 180.02562 * 20 19 18 23 23 C 1.35453 * 107.86330 * 0.02562 * 19 18 17 24 24 N 1.35543 * 108.87012 * 359.72943 * 23 19 18 25 25 C 1.53783 * 87.08090 * 25.43302 * 12 11 9 26 26 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 27 27 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 28 28 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47066 * 60.00169 * 3 2 1 30 30 H 1.08996 * 109.47747 * 179.97438 * 3 2 1 31 31 H 1.09002 * 109.47103 * 300.00247 * 3 2 1 32 32 H 1.08993 * 109.46955 * 60.00011 * 4 2 1 33 33 H 1.09000 * 109.47050 * 179.97438 * 4 2 1 34 34 H 1.09001 * 109.47002 * 299.99574 * 4 2 1 35 35 H 0.97000 * 120.00566 * 359.97438 * 8 6 5 36 36 H 1.09001 * 113.61697 * 203.65965 * 11 9 8 37 37 H 1.08990 * 113.61281 * 334.56856 * 11 9 8 38 38 H 0.96996 * 120.00044 * 287.46442 * 14 12 11 39 39 H 1.08007 * 126.45958 * 359.97148 * 18 17 15 40 40 H 1.08998 * 109.46667 * 59.99758 * 20 19 18 41 41 H 0.96702 * 113.99722 * 179.97438 * 21 20 19 42 42 H 1.48505 * 109.99833 * 298.68344 * 22 20 19 43 43 H 1.48499 * 109.99909 * 59.99929 * 22 20 19 44 44 H 1.08003 * 125.56586 * 179.97438 * 23 19 18 45 45 H 0.97003 * 125.67471 * 180.30450 * 24 23 19 46 46 H 1.09001 * 113.60901 * 220.01603 * 25 12 11 47 47 H 1.08999 * 113.61310 * 89.12092 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 1.2492 5 8 2.0140 -0.6846 -1.1856 6 6 1.6523 -0.1728 -2.3772 7 8 0.9510 0.8183 -2.4253 8 7 2.0672 -0.7606 -3.5169 9 6 1.6732 -0.2041 -4.8135 10 1 0.7588 0.3868 -4.7603 11 6 2.8211 0.4994 -5.5566 12 6 3.1484 -0.8668 -6.1823 13 1 3.8450 -1.4619 -5.5917 14 7 3.5215 -0.7921 -7.5970 15 6 4.8037 -0.9814 -7.9667 16 8 5.6514 -1.2149 -7.1254 17 6 5.1771 -0.9072 -9.3832 18 6 6.4428 -1.0783 -9.9023 19 6 6.3429 -0.9233 -11.2884 20 6 7.4760 -1.0252 -12.2767 21 8 8.4645 -0.0394 -11.9713 22 14 6.8257 -0.7390 -13.9989 23 6 5.0467 -0.6653 -11.5853 24 7 4.3269 -0.6584 -10.4367 25 6 1.6736 -1.2370 -5.9529 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.6768 1.9562 0.8900 30 1 3.1300 1.4424 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 -1.7489 1.2492 33 1 3.1300 -0.7217 1.2490 34 1 1.6767 -0.2075 2.1393 35 1 2.6268 -1.5520 -3.4786 36 1 2.4831 1.2412 -6.2801 37 1 3.6026 0.8757 -4.8965 38 1 2.8458 -0.6063 -8.2676 39 1 7.3423 -1.2911 -9.3436 40 1 7.9222 -2.0178 -12.2167 41 1 9.2252 -0.0471 -12.5682 42 1 5.8196 -1.7764 -14.3408 43 1 6.2151 0.6113 -14.0933 44 1 4.6506 -0.4969 -12.5758 45 1 3.3720 -0.5024 -10.3685 46 1 1.5287 -2.2624 -5.6127 47 1 1.0218 -0.9699 -6.7847 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_10543058.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:20:21 Heat of formation + Delta-G solvation = -69.845488 kcal Electronic energy + Delta-G solvation = -28883.848421 eV Core-core repulsion = 24649.335819 eV Total energy + Delta-G solvation = -4234.512602 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.172 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.54283 -41.90375 -40.93647 -39.46967 -37.79165 -37.59589 -35.50388 -34.91254 -33.43594 -32.56569 -30.75313 -28.31712 -28.27976 -27.00833 -26.95443 -25.87556 -24.07409 -23.29075 -21.37630 -21.08787 -20.94044 -20.56922 -19.62986 -19.24290 -18.28329 -17.76976 -17.33838 -17.23165 -17.01774 -16.60036 -16.28737 -15.74449 -15.55215 -15.33123 -15.16824 -15.09831 -14.86610 -14.73991 -14.36078 -14.33754 -14.05734 -13.97716 -13.72829 -13.46443 -13.36483 -13.27730 -13.09947 -12.84949 -12.81812 -12.47806 -12.45796 -12.25421 -12.07108 -11.95257 -11.80575 -11.29584 -11.16425 -10.98225 -10.35623 -10.34193 -10.15780 -9.89621 -9.34097 -5.01973 0.35393 1.12914 1.27927 1.45527 1.66001 1.84731 1.87514 1.94185 1.99201 2.31765 3.05382 3.14326 3.30989 3.51787 3.65652 3.71764 3.78413 3.82030 3.82927 3.84357 3.98050 4.04694 4.26838 4.32743 4.40617 4.45200 4.57573 4.58240 4.62730 4.64192 4.69840 4.79259 4.80714 4.85811 4.86615 4.91359 4.94046 5.02669 5.09658 5.18928 5.33461 5.37243 5.46632 5.55254 5.59840 5.75571 6.13873 6.34210 6.37491 6.73855 7.06419 7.40047 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.184 4.184 4 C -0.142 4.142 5 O -0.363 6.363 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.143 3.857 10 H 0.116 0.884 11 C -0.165 4.165 12 C 0.123 3.877 13 H 0.120 0.880 14 N -0.723 5.723 15 C 0.593 3.407 16 O -0.521 6.521 17 C -0.059 4.059 18 C -0.070 4.070 19 C -0.165 4.165 20 C -0.037 4.037 21 O -0.547 6.547 22 Si 0.686 3.314 23 C 0.028 3.972 24 N -0.534 5.534 25 C -0.152 4.152 26 H 0.087 0.913 27 H 0.072 0.928 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.060 0.940 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.068 0.932 34 H 0.082 0.918 35 H 0.408 0.592 36 H 0.098 0.902 37 H 0.081 0.919 38 H 0.395 0.605 39 H 0.153 0.847 40 H 0.072 0.928 41 H 0.380 0.620 42 H -0.257 1.257 43 H -0.253 1.253 44 H 0.167 0.833 45 H 0.418 0.582 46 H 0.087 0.913 47 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.630 -2.038 -4.500 5.202 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.242 4.242 4 C -0.199 4.199 5 O -0.278 6.278 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.037 3.963 10 H 0.134 0.866 11 C -0.205 4.205 12 C 0.019 3.981 13 H 0.138 0.862 14 N -0.373 5.373 15 C 0.381 3.619 16 O -0.396 6.396 17 C -0.171 4.171 18 C -0.096 4.096 19 C -0.172 4.172 20 C -0.148 4.148 21 O -0.353 6.353 22 Si 0.587 3.413 23 C -0.109 4.109 24 N -0.131 5.131 25 C -0.191 4.191 26 H 0.105 0.895 27 H 0.091 0.909 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.079 0.921 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.087 0.913 34 H 0.101 0.899 35 H 0.243 0.757 36 H 0.116 0.884 37 H 0.100 0.900 38 H 0.229 0.771 39 H 0.171 0.829 40 H 0.089 0.911 41 H 0.227 0.773 42 H -0.182 1.182 43 H -0.178 1.178 44 H 0.184 0.816 45 H 0.256 0.744 46 H 0.105 0.895 47 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -2.671 -1.383 -3.733 4.794 hybrid contribution -0.672 -0.278 0.149 0.743 sum -3.343 -1.661 -3.583 5.174 Atomic orbital electron populations 1.22524 0.93818 1.03007 1.04761 1.22138 0.94448 0.92277 0.81124 1.22522 1.01686 0.95194 1.04751 1.21882 1.02404 1.01189 0.94448 1.86317 1.71427 1.56408 1.13661 1.18040 0.78546 0.81431 0.81193 1.90919 1.40884 1.26500 1.86971 1.44351 1.55584 1.32836 1.02729 1.21567 0.99069 0.95657 0.79984 0.86639 1.24013 0.99124 0.97485 0.99907 1.22687 0.95905 0.97860 0.81681 0.86228 1.45824 1.09019 1.73654 1.08830 1.17043 0.82428 0.76309 0.86116 1.90880 1.49342 1.48346 1.51080 1.20409 0.91471 1.17881 0.87340 1.21212 0.95533 0.99887 0.92991 1.18825 0.92699 1.11236 0.94395 1.23982 0.90792 0.94060 1.05984 1.86517 1.33571 1.56305 1.58871 0.95079 0.86075 0.80450 0.79679 1.21664 0.92136 1.06581 0.90487 1.41846 1.10126 1.55233 1.05863 1.23790 0.96157 1.00721 0.98469 0.89453 0.90892 0.92104 0.90897 0.92061 0.89440 0.91379 0.91341 0.89894 0.75666 0.88376 0.90011 0.77077 0.82923 0.91051 0.77277 1.18183 1.17779 0.81574 0.74407 0.89476 0.87777 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.22 1.13 -90.62 -0.10 0.11 16 3 C -0.18 -0.31 8.37 37.15 0.31 0.00 16 4 C -0.14 0.05 8.85 37.16 0.33 0.38 16 5 O -0.36 -0.98 9.94 -40.33 -0.40 -1.38 16 6 C 0.65 1.90 8.06 54.06 0.44 2.34 16 7 O -0.56 -2.86 11.48 -19.28 -0.22 -3.08 16 8 N -0.70 0.02 5.27 -57.93 -0.31 -0.29 16 9 C 0.14 -0.18 4.32 -67.12 -0.29 -0.47 16 10 H 0.12 -0.04 7.46 -51.93 -0.39 -0.43 16 11 C -0.17 0.17 7.68 -25.92 -0.20 -0.03 16 12 C 0.12 -0.17 4.11 -67.11 -0.28 -0.45 16 13 H 0.12 0.02 7.46 -51.93 -0.39 -0.37 16 14 N -0.72 0.91 5.35 -54.32 -0.29 0.62 16 15 C 0.59 1.54 7.79 -12.85 -0.10 1.44 16 16 O -0.52 -3.40 16.48 5.19 0.09 -3.32 16 17 C -0.06 -0.12 7.06 -81.98 -0.58 -0.70 16 18 C -0.07 -0.25 10.59 -39.12 -0.41 -0.66 16 19 C -0.16 -0.37 5.47 -105.02 -0.57 -0.94 16 20 C -0.04 0.00 3.01 36.01 0.11 0.10 16 21 O -0.55 -0.45 12.85 -35.23 -0.45 -0.90 16 22 Si 0.69 -1.21 30.59 -169.99 -5.20 -6.41 16 23 C 0.03 0.01 10.45 -16.91 -0.18 -0.17 16 24 N -0.53 0.49 5.99 -9.39 -0.06 0.43 16 25 C -0.15 0.53 7.58 -25.92 -0.20 0.33 16 26 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 27 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 29 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.06 0.10 8.14 -51.93 -0.42 -0.33 16 31 H 0.09 0.33 5.88 -51.93 -0.31 0.02 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 34 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 35 H 0.41 -0.67 8.81 -40.82 -0.36 -1.03 16 36 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 37 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 38 H 0.40 -1.71 7.86 -40.82 -0.32 -2.03 16 39 H 0.15 0.60 8.06 -52.48 -0.42 0.18 16 40 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 41 H 0.38 -1.65 8.74 45.56 0.40 -1.25 16 42 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 43 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 44 H 0.17 -0.24 6.19 -52.48 -0.32 -0.57 16 45 H 0.42 -1.95 8.19 -40.82 -0.33 -2.29 16 46 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 47 H 0.10 -0.53 8.12 -51.93 -0.42 -0.95 16 LS Contribution 387.04 15.07 5.83 5.83 Total: 0.00 -11.17 387.04 -9.43 -20.60 By element: Atomic # 1 Polarization: -6.44 SS G_CDS: -7.01 Total: -13.45 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -1.41 Total: 1.34 kcal Atomic # 7 Polarization: 1.42 SS G_CDS: -0.65 Total: 0.77 kcal Atomic # 8 Polarization: -7.69 SS G_CDS: -0.99 Total: -8.68 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.20 Total: -6.41 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -11.17 -9.43 -20.60 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_10543058.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.249 kcal (2) G-P(sol) polarization free energy of solvation -11.166 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.431 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds