Wall clock time and date at job start Sun Mar 7 2021 00:20:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 C 1.53006 * 109.47127 * 120.00347 * 2 1 3 5 5 O 1.45206 * 109.47226 * 239.99648 * 2 1 3 6 6 C 1.34644 * 116.99182 * 60.00595 * 5 2 1 7 7 O 1.21507 * 120.00513 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99419 * 180.02562 * 6 5 2 9 9 C 1.46497 * 119.99707 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.85338 * 336.18656 * 9 8 6 11 11 C 1.53781 * 113.61842 * 107.49856 * 9 8 6 12 12 C 1.53787 * 87.08000 * 89.11557 * 11 9 8 13 13 H 1.09006 * 113.61416 * 270.88429 * 12 11 9 14 14 N 1.46499 * 113.69243 * 139.99482 * 12 11 9 15 15 C 1.34777 * 120.00152 * 107.45958 * 14 12 11 16 16 O 1.21698 * 119.99920 * 0.02562 * 15 14 12 17 17 C 1.46674 * 120.00070 * 179.97438 * 15 14 12 18 18 C 1.37867 * 126.23386 * 179.97438 * 17 15 14 19 19 C 1.39835 * 107.08908 * 180.02562 * 18 17 15 20 20 C 1.50702 * 126.07348 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.46978 * 300.00573 * 20 19 18 22 22 Si 1.86294 * 109.47455 * 180.02562 * 20 19 18 23 23 C 1.35453 * 107.86330 * 0.02562 * 19 18 17 24 24 N 1.35543 * 108.87012 * 359.72943 * 23 19 18 25 25 C 1.53783 * 87.08090 * 25.43302 * 12 11 9 26 26 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 27 27 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 28 28 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47066 * 60.00169 * 3 2 1 30 30 H 1.08996 * 109.47747 * 179.97438 * 3 2 1 31 31 H 1.09002 * 109.47103 * 300.00247 * 3 2 1 32 32 H 1.08993 * 109.46955 * 60.00011 * 4 2 1 33 33 H 1.09000 * 109.47050 * 179.97438 * 4 2 1 34 34 H 1.09001 * 109.47002 * 299.99574 * 4 2 1 35 35 H 0.97000 * 120.00566 * 359.97438 * 8 6 5 36 36 H 1.09001 * 113.61697 * 203.65965 * 11 9 8 37 37 H 1.08990 * 113.61281 * 334.56856 * 11 9 8 38 38 H 0.96996 * 120.00044 * 287.46442 * 14 12 11 39 39 H 1.08007 * 126.45958 * 359.97148 * 18 17 15 40 40 H 1.08998 * 109.46667 * 59.99758 * 20 19 18 41 41 H 0.96702 * 113.99722 * 179.97438 * 21 20 19 42 42 H 1.48505 * 109.99833 * 298.68344 * 22 20 19 43 43 H 1.48499 * 109.99909 * 59.99929 * 22 20 19 44 44 H 1.08003 * 125.56586 * 179.97438 * 23 19 18 45 45 H 0.97003 * 125.67471 * 180.30450 * 24 23 19 46 46 H 1.09001 * 113.60901 * 220.01603 * 25 12 11 47 47 H 1.08999 * 113.61310 * 89.12092 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 1.2492 5 8 2.0140 -0.6846 -1.1856 6 6 1.6523 -0.1728 -2.3772 7 8 0.9510 0.8183 -2.4253 8 7 2.0672 -0.7606 -3.5169 9 6 1.6732 -0.2041 -4.8135 10 1 0.7588 0.3868 -4.7603 11 6 2.8211 0.4994 -5.5566 12 6 3.1484 -0.8668 -6.1823 13 1 3.8450 -1.4619 -5.5917 14 7 3.5215 -0.7921 -7.5970 15 6 4.8037 -0.9814 -7.9667 16 8 5.6514 -1.2149 -7.1254 17 6 5.1771 -0.9072 -9.3832 18 6 6.4428 -1.0783 -9.9023 19 6 6.3429 -0.9233 -11.2884 20 6 7.4760 -1.0252 -12.2767 21 8 8.4645 -0.0394 -11.9713 22 14 6.8257 -0.7390 -13.9989 23 6 5.0467 -0.6653 -11.5853 24 7 4.3269 -0.6584 -10.4367 25 6 1.6736 -1.2370 -5.9529 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.6768 1.9562 0.8900 30 1 3.1300 1.4424 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 -1.7489 1.2492 33 1 3.1300 -0.7217 1.2490 34 1 1.6767 -0.2075 2.1393 35 1 2.6268 -1.5520 -3.4786 36 1 2.4831 1.2412 -6.2801 37 1 3.6026 0.8757 -4.8965 38 1 2.8458 -0.6063 -8.2676 39 1 7.3423 -1.2911 -9.3436 40 1 7.9222 -2.0178 -12.2167 41 1 9.2252 -0.0471 -12.5682 42 1 5.8196 -1.7764 -14.3408 43 1 6.2151 0.6113 -14.0933 44 1 4.6506 -0.4969 -12.5758 45 1 3.3720 -0.5024 -10.3685 46 1 1.5287 -2.2624 -5.6127 47 1 1.0218 -0.9699 -6.7847 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_10543058.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:20:20 Heat of formation + Delta-G solvation = -75.269973 kcal Electronic energy + Delta-G solvation = -28884.083645 eV Core-core repulsion = 24649.335819 eV Total energy + Delta-G solvation = -4234.747826 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.172 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.62304 -42.02405 -41.00072 -39.61693 -37.95259 -37.58734 -35.65951 -35.02869 -33.51462 -32.62366 -30.85647 -28.40875 -28.34393 -26.99518 -26.87536 -25.88834 -24.18715 -23.36467 -21.48779 -21.21448 -20.97861 -20.60333 -19.65085 -19.37776 -18.26859 -17.84899 -17.46766 -17.30386 -17.13487 -16.61672 -16.42244 -15.82738 -15.64863 -15.42549 -15.23561 -15.11806 -14.91799 -14.80952 -14.46133 -14.40674 -14.11258 -13.98109 -13.60513 -13.46147 -13.42833 -13.24012 -13.15411 -12.96306 -12.91231 -12.58406 -12.48656 -12.37541 -12.05856 -11.94188 -11.77404 -11.44840 -11.39492 -11.18271 -10.40725 -10.34294 -10.23016 -9.94239 -9.42697 -4.86773 0.21168 1.06288 1.29901 1.45355 1.65181 1.76372 1.82265 1.99224 2.05739 2.14018 3.02941 3.23429 3.40700 3.58788 3.69423 3.69621 3.73583 3.76629 3.88595 3.90078 3.91239 4.03781 4.23060 4.36215 4.48134 4.57249 4.57673 4.60167 4.61799 4.69656 4.72505 4.76903 4.78036 4.81390 4.83532 4.86929 4.88867 4.90122 5.07315 5.18095 5.22992 5.27921 5.39321 5.45227 5.53877 5.60696 6.20964 6.28097 6.39312 6.95753 7.01024 7.24950 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.180 4.180 4 C -0.138 4.138 5 O -0.370 6.370 6 C 0.647 3.353 7 O -0.590 6.590 8 N -0.687 5.687 9 C 0.138 3.862 10 H 0.109 0.891 11 C -0.163 4.163 12 C 0.119 3.881 13 H 0.102 0.898 14 N -0.702 5.702 15 C 0.591 3.409 16 O -0.570 6.570 17 C -0.064 4.064 18 C -0.102 4.102 19 C -0.190 4.190 20 C -0.058 4.058 21 O -0.572 6.572 22 Si 0.787 3.213 23 C 0.033 3.967 24 N -0.514 5.514 25 C -0.128 4.128 26 H 0.065 0.935 27 H 0.087 0.913 28 H 0.063 0.937 29 H 0.088 0.912 30 H 0.059 0.941 31 H 0.064 0.936 32 H 0.070 0.930 33 H 0.067 0.933 34 H 0.100 0.900 35 H 0.416 0.584 36 H 0.111 0.889 37 H 0.057 0.943 38 H 0.414 0.586 39 H 0.133 0.867 40 H 0.079 0.921 41 H 0.400 0.600 42 H -0.279 1.279 43 H -0.292 1.292 44 H 0.189 0.811 45 H 0.438 0.562 46 H 0.096 0.904 47 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.980 -2.439 -5.634 6.824 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.090 3.910 3 C -0.238 4.238 4 C -0.195 4.195 5 O -0.285 6.285 6 C 0.401 3.599 7 O -0.480 6.480 8 N -0.347 5.347 9 C 0.033 3.967 10 H 0.127 0.873 11 C -0.203 4.203 12 C 0.014 3.986 13 H 0.120 0.880 14 N -0.352 5.352 15 C 0.380 3.620 16 O -0.449 6.449 17 C -0.177 4.177 18 C -0.129 4.129 19 C -0.196 4.196 20 C -0.167 4.167 21 O -0.381 6.381 22 Si 0.690 3.310 23 C -0.104 4.104 24 N -0.111 5.111 25 C -0.166 4.166 26 H 0.084 0.916 27 H 0.106 0.894 28 H 0.082 0.918 29 H 0.107 0.893 30 H 0.078 0.922 31 H 0.083 0.917 32 H 0.089 0.911 33 H 0.086 0.914 34 H 0.118 0.882 35 H 0.252 0.748 36 H 0.129 0.871 37 H 0.076 0.924 38 H 0.251 0.749 39 H 0.151 0.849 40 H 0.097 0.903 41 H 0.250 0.750 42 H -0.205 1.205 43 H -0.219 1.219 44 H 0.206 0.794 45 H 0.279 0.721 46 H 0.114 0.886 47 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -4.046 -1.800 -4.878 6.589 hybrid contribution -0.241 -0.113 0.526 0.589 sum -4.287 -1.913 -4.352 6.402 Atomic orbital electron populations 1.22469 0.93730 1.03032 1.04383 1.22380 0.94675 0.92405 0.81503 1.22476 1.01511 0.95421 1.04360 1.21898 1.02371 1.01323 0.93933 1.86323 1.71535 1.56648 1.13982 1.18290 0.78524 0.81362 0.81739 1.90903 1.42157 1.27647 1.87334 1.44418 1.55034 1.32715 1.02496 1.21660 0.98490 0.96641 0.79922 0.87252 1.24015 0.98550 0.97887 0.99870 1.22694 0.97094 0.97613 0.81197 0.88002 1.45655 1.08143 1.71976 1.09476 1.17170 0.83055 0.75867 0.85924 1.90852 1.50940 1.50871 1.52272 1.20256 0.91649 1.18154 0.87650 1.21265 0.95787 1.01733 0.94118 1.19255 0.94346 1.11780 0.94264 1.24405 0.90558 0.94409 1.07327 1.86463 1.34732 1.56642 1.60299 0.93815 0.83946 0.76607 0.76641 1.21995 0.91696 1.05297 0.91457 1.41759 1.10869 1.53804 1.04697 1.23731 0.94438 1.00545 0.97936 0.91642 0.89396 0.91816 0.89323 0.92220 0.91729 0.91084 0.91392 0.88187 0.74767 0.87081 0.92410 0.74929 0.84871 0.90316 0.74994 1.20538 1.21863 0.79390 0.72088 0.88558 0.85012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.59 8.37 71.98 0.60 0.02 16 2 C 0.13 0.47 1.13 -10.79 -0.01 0.46 16 3 C -0.18 -0.77 8.37 71.98 0.60 -0.17 16 4 C -0.14 0.16 8.85 71.98 0.64 0.80 16 5 O -0.37 -2.40 9.94 -55.53 -0.55 -2.95 16 6 C 0.65 4.63 8.06 129.79 1.05 5.67 16 7 O -0.59 -6.99 11.48 19.82 0.23 -6.77 16 8 N -0.69 -0.58 5.27 -567.60 -2.99 -3.57 16 9 C 0.14 -0.34 4.32 45.52 0.20 -0.14 16 10 H 0.11 -0.06 7.46 -2.39 -0.02 -0.07 16 11 C -0.16 0.24 7.68 31.12 0.24 0.48 16 12 C 0.12 -0.31 4.11 45.52 0.19 -0.13 16 13 H 0.10 0.17 7.46 -2.38 -0.02 0.15 16 14 N -0.70 1.98 5.35 -443.98 -2.38 -0.40 16 15 C 0.59 3.76 7.79 86.45 0.67 4.44 16 16 O -0.57 -8.92 16.48 -4.34 -0.07 -8.99 16 17 C -0.06 -0.32 7.06 40.35 0.28 -0.04 16 18 C -0.10 -0.93 10.59 22.57 0.24 -0.69 16 19 C -0.19 -0.99 5.47 -20.12 -0.11 -1.10 16 20 C -0.06 -0.03 3.01 71.24 0.21 0.18 16 21 O -0.57 -1.39 12.85 -148.98 -1.92 -3.30 16 22 Si 0.79 -3.42 30.59 68.60 2.10 -1.32 16 23 C 0.03 0.01 10.45 83.48 0.87 0.88 16 24 N -0.51 1.30 5.99 -183.62 -1.10 0.20 16 25 C -0.13 1.06 7.58 31.12 0.24 1.29 16 26 H 0.06 0.54 5.88 -2.39 -0.01 0.52 16 27 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 28 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 29 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 30 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 31 H 0.06 0.60 5.88 -2.39 -0.01 0.59 16 32 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 33 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 34 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 35 H 0.42 -1.02 8.81 -92.71 -0.82 -1.83 16 36 H 0.11 -0.46 8.14 -2.39 -0.02 -0.48 16 37 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 38 H 0.41 -4.27 7.86 -92.71 -0.73 -5.00 16 39 H 0.13 1.58 8.06 -2.91 -0.02 1.56 16 40 H 0.08 -0.14 7.96 -2.39 -0.02 -0.16 16 41 H 0.40 -3.36 8.74 -74.06 -0.65 -4.01 16 42 H -0.28 0.21 7.11 99.48 0.71 0.92 16 43 H -0.29 -0.58 7.11 99.48 0.71 0.12 16 44 H 0.19 -0.85 6.19 -2.91 -0.02 -0.87 16 45 H 0.44 -4.89 8.19 -92.71 -0.76 -5.65 16 46 H 0.10 -0.87 8.14 -2.39 -0.02 -0.88 16 47 H 0.13 -1.74 8.12 -2.39 -0.02 -1.76 16 Total: 0.00 -29.48 387.04 -2.65 -32.13 By element: Atomic # 1 Polarization: -15.11 SS G_CDS: -1.88 Total: -16.98 kcal Atomic # 6 Polarization: 6.04 SS G_CDS: 5.91 Total: 11.95 kcal Atomic # 7 Polarization: 2.70 SS G_CDS: -6.47 Total: -3.77 kcal Atomic # 8 Polarization: -19.70 SS G_CDS: -2.31 Total: -22.01 kcal Atomic # 14 Polarization: -3.42 SS G_CDS: 2.10 Total: -1.32 kcal Total: -29.48 -2.65 -32.13 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_10543058.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.138 kcal (2) G-P(sol) polarization free energy of solvation -29.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.623 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.647 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.132 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.270 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds