Wall clock time and date at job start Sun Mar 7 2021 00:20:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35523 * 125.68396 * 2 1 4 4 C 1.35452 * 108.87867 * 179.97438 * 3 2 1 5 5 C 1.50699 * 126.07079 * 179.97438 * 4 3 2 6 6 O 1.42895 * 109.47421 * 244.97845 * 5 4 3 7 7 Si 1.86290 * 109.47140 * 4.98352 * 5 4 3 8 8 C 1.39840 * 107.85983 * 359.74544 * 4 3 2 9 9 C 1.37653 * 125.67104 * 179.97438 * 2 1 3 10 10 C 1.46674 * 126.23870 * 0.02562 * 9 2 1 11 11 O 1.21701 * 119.99711 * 5.20906 * 10 9 2 12 12 N 1.34778 * 120.00171 * 185.21658 * 10 9 2 13 13 C 1.46504 * 119.99981 * 174.48077 * 12 10 9 14 14 H 1.08999 * 112.84724 * 336.19516 * 13 12 10 15 15 C 1.53774 * 113.61431 * 107.49953 * 13 12 10 16 16 C 1.53787 * 87.07949 * 89.11920 * 15 13 12 17 17 H 1.09007 * 113.68655 * 270.86968 * 16 15 13 18 18 N 1.46496 * 113.61625 * 139.98377 * 16 15 13 19 19 C 1.34777 * 120.00375 * 107.50259 * 18 16 15 20 20 O 1.21514 * 119.99852 * 359.97438 * 19 18 16 21 21 O 1.34632 * 120.00042 * 180.02562 * 19 18 16 22 22 C 1.45204 * 117.00044 * 179.97438 * 21 19 18 23 23 C 1.53004 * 109.46950 * 59.99905 * 22 21 19 24 24 C 1.52994 * 109.47464 * 179.97438 * 22 21 19 25 25 C 1.53001 * 109.47104 * 300.00066 * 22 21 19 26 26 C 1.53777 * 113.61422 * 205.00210 * 13 12 10 27 27 H 1.09006 * 109.46718 * 272.07033 * 1 2 3 28 28 H 1.09002 * 109.46770 * 32.06352 * 1 2 3 29 29 H 1.08987 * 109.47635 * 152.06626 * 1 2 3 30 30 H 1.08004 * 125.56333 * 0.02562 * 3 2 1 31 31 H 1.09007 * 109.46411 * 124.97916 * 5 4 3 32 32 H 0.96700 * 113.99684 * 60.00271 * 6 5 4 33 33 H 1.48500 * 110.00370 * 58.67517 * 7 5 4 34 34 H 1.48503 * 109.99984 * 179.97438 * 7 5 4 35 35 H 1.08002 * 126.46140 * 180.26324 * 8 4 3 36 36 H 0.96995 * 120.00170 * 354.20783 * 12 10 9 37 37 H 1.09002 * 113.61629 * 203.66013 * 15 13 12 38 38 H 1.08998 * 113.61813 * 334.57300 * 15 13 12 39 39 H 0.97002 * 119.99867 * 287.49923 * 18 16 15 40 40 H 1.09000 * 109.47018 * 59.99791 * 23 22 21 41 41 H 1.08994 * 109.46760 * 180.02562 * 23 22 21 42 42 H 1.09001 * 109.46878 * 300.00011 * 23 22 21 43 43 H 1.08999 * 109.46878 * 59.99851 * 24 22 21 44 44 H 1.08993 * 109.47578 * 180.02562 * 24 22 21 45 45 H 1.09004 * 109.47238 * 300.00157 * 24 22 21 46 46 H 1.09001 * 109.47375 * 59.99590 * 25 22 21 47 47 H 1.09005 * 109.47173 * 179.97438 * 25 22 21 48 48 H 1.08999 * 109.46981 * 299.99991 * 25 22 21 49 49 H 1.09000 * 113.61454 * 25.42683 * 26 13 12 50 50 H 1.08997 * 113.61764 * 156.33750 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1008 0.0000 4 6 3.5522 0.7092 0.0006 5 6 4.7538 1.6187 0.0002 6 8 5.4778 1.4510 -1.2203 7 14 4.1928 3.3887 0.1515 8 6 3.5780 -0.6890 0.0069 9 6 2.2677 -1.1183 0.0005 10 6 1.8123 -2.5125 0.0006 11 8 0.6256 -2.7650 -0.0955 12 7 2.7079 -3.5140 0.1072 13 6 2.2467 -4.8992 0.2291 14 1 1.2352 -4.9750 0.6281 15 6 2.4750 -5.7383 -1.0391 16 6 3.8561 -6.0913 -0.4620 17 1 4.6402 -5.3874 -0.7411 18 7 4.2425 -7.4879 -0.6769 19 6 5.1994 -7.7917 -1.5761 20 8 5.7414 -6.9071 -2.2088 21 8 5.5541 -9.0753 -1.7740 22 6 6.5913 -9.3284 -2.7581 23 6 7.8749 -8.6064 -2.3435 24 6 6.8576 -10.8326 -2.8432 25 6 6.1347 -8.8128 -4.1244 26 6 3.2557 -5.8251 0.9286 27 1 -0.3633 0.0371 1.0271 28 1 -0.3633 0.8709 -0.5456 29 1 -0.3634 -0.9078 -0.4813 30 1 1.9083 2.1235 0.0004 31 1 5.3988 1.3687 0.8427 32 1 4.9643 1.6564 -2.0135 33 1 3.4113 3.5689 1.4013 34 1 5.3687 4.2958 0.1529 35 1 4.4582 -1.3147 0.0129 36 1 3.6578 -3.3181 0.0993 37 1 1.8052 -6.5942 -1.1229 38 1 2.5221 -5.1453 -1.9525 39 1 3.8096 -8.1941 -0.1720 40 1 8.2002 -8.9737 -1.3701 41 1 8.6533 -8.7960 -3.0825 42 1 7.6855 -7.5347 -2.2826 43 1 5.9433 -11.3473 -3.1383 44 1 7.6365 -11.0226 -3.5816 45 1 7.1831 -11.1996 -1.8697 46 1 5.9453 -7.7411 -4.0635 47 1 6.9135 -9.0024 -4.8631 48 1 5.2202 -9.3271 -4.4197 49 1 3.9331 -5.3021 1.6037 50 1 2.7994 -6.7047 1.3827 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_10803934.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:20:25 Heat of formation + Delta-G solvation = -67.279262 kcal Electronic energy + Delta-G solvation = -31457.960222 eV Core-core repulsion = 27068.021281 eV Total energy + Delta-G solvation = -4389.938941 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.58154 -41.84283 -40.96856 -39.36092 -37.83897 -37.62630 -35.51624 -34.89443 -33.99587 -33.23473 -30.75220 -28.37310 -28.31410 -28.27119 -26.94417 -26.29832 -25.62318 -23.98272 -23.03131 -21.48488 -21.06051 -20.75409 -20.34643 -19.11489 -18.81445 -18.01678 -17.56259 -17.09664 -17.03209 -16.78277 -16.76275 -16.44232 -15.90781 -15.73481 -15.49188 -15.39045 -15.27716 -15.07352 -14.72914 -14.42991 -14.38429 -14.04217 -13.92649 -13.72156 -13.53193 -13.41936 -13.33747 -13.19905 -13.16262 -13.10379 -12.83341 -12.81068 -12.46405 -12.22386 -12.20647 -12.00941 -11.90703 -11.75303 -11.28003 -11.06586 -10.94768 -10.30953 -10.29653 -10.09499 -9.70533 -9.26934 -5.02552 0.41829 1.21291 1.36837 1.50002 1.50801 1.69363 1.88276 2.01940 2.23005 2.32310 3.11264 3.23560 3.36269 3.59023 3.65447 3.72368 3.78074 3.79173 3.84165 3.85062 3.90684 3.98798 4.18105 4.25002 4.35506 4.37501 4.48996 4.53548 4.57955 4.61617 4.64561 4.66147 4.67912 4.71609 4.76097 4.79625 4.84376 4.90770 4.92505 4.94801 5.09718 5.17272 5.22999 5.38201 5.41228 5.49620 5.61439 5.65558 5.88695 6.10654 6.37861 6.42515 6.71081 7.11490 7.43542 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.403 5.403 3 C 0.028 3.972 4 C -0.208 4.208 5 C -0.031 4.031 6 O -0.543 6.543 7 Si 0.683 3.317 8 C -0.111 4.111 9 C -0.056 4.056 10 C 0.597 3.403 11 O -0.544 6.544 12 N -0.704 5.704 13 C 0.129 3.871 14 H 0.114 0.886 15 C -0.164 4.164 16 C 0.139 3.861 17 H 0.120 0.880 18 N -0.702 5.702 19 C 0.650 3.350 20 O -0.566 6.566 21 O -0.365 6.365 22 C 0.137 3.863 23 C -0.184 4.184 24 C -0.142 4.142 25 C -0.184 4.184 26 C -0.152 4.152 27 H 0.078 0.922 28 H 0.087 0.913 29 H 0.108 0.892 30 H 0.174 0.826 31 H 0.111 0.889 32 H 0.378 0.622 33 H -0.257 1.257 34 H -0.256 1.256 35 H 0.145 0.855 36 H 0.405 0.595 37 H 0.098 0.902 38 H 0.081 0.919 39 H 0.407 0.593 40 H 0.060 0.940 41 H 0.072 0.928 42 H 0.087 0.913 43 H 0.067 0.933 44 H 0.082 0.918 45 H 0.067 0.933 46 H 0.087 0.913 47 H 0.072 0.928 48 H 0.060 0.940 49 H 0.086 0.914 50 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.711 -0.515 0.430 1.838 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.075 5.075 3 C -0.108 4.108 4 C -0.214 4.214 5 C -0.143 4.143 6 O -0.348 6.348 7 Si 0.585 3.415 8 C -0.137 4.137 9 C -0.169 4.169 10 C 0.385 3.615 11 O -0.422 6.422 12 N -0.355 5.355 13 C 0.023 3.977 14 H 0.132 0.868 15 C -0.205 4.205 16 C 0.035 3.965 17 H 0.137 0.863 18 N -0.360 5.360 19 C 0.404 3.596 20 O -0.454 6.454 21 O -0.280 6.280 22 C 0.100 3.900 23 C -0.241 4.241 24 C -0.199 4.199 25 C -0.241 4.241 26 C -0.191 4.191 27 H 0.096 0.904 28 H 0.105 0.895 29 H 0.127 0.873 30 H 0.191 0.809 31 H 0.128 0.872 32 H 0.225 0.775 33 H -0.182 1.182 34 H -0.181 1.181 35 H 0.163 0.837 36 H 0.241 0.759 37 H 0.117 0.883 38 H 0.099 0.901 39 H 0.243 0.757 40 H 0.079 0.921 41 H 0.091 0.909 42 H 0.106 0.894 43 H 0.086 0.914 44 H 0.101 0.899 45 H 0.086 0.914 46 H 0.106 0.894 47 H 0.091 0.909 48 H 0.079 0.921 49 H 0.105 0.895 50 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -2.138 0.216 0.911 2.334 hybrid contribution 0.465 -0.754 0.477 1.006 sum -1.674 -0.538 1.388 2.240 Atomic orbital electron populations 1.22415 0.75506 1.06022 1.04176 1.43804 1.07021 1.04661 1.52034 1.21867 0.90046 0.91665 1.07253 1.19789 0.93735 0.94868 1.13051 1.24317 0.92810 1.07334 0.89794 1.86488 1.41171 1.91993 1.15144 0.95104 0.83489 0.75938 0.86953 1.21207 0.94270 0.94690 1.03554 1.19946 0.90308 0.87488 1.19131 1.16929 0.85450 0.83461 0.75625 1.90796 1.16325 1.84756 1.50367 1.45301 1.09896 1.05349 1.74940 1.21612 0.99584 0.79673 0.96865 0.86843 1.24016 0.96954 1.00494 0.99002 1.22681 0.96478 0.81456 0.95877 0.86259 1.44730 1.39768 1.09286 1.42213 1.18178 0.79712 0.81767 0.79981 1.90919 1.56422 1.48109 1.49982 1.86307 1.55804 1.26498 1.59394 1.22117 0.85138 0.96314 0.86406 1.22524 0.96151 1.03453 1.01999 1.21878 1.02811 0.91950 1.03278 1.22522 1.02024 1.04345 0.95239 1.23804 0.98460 1.00303 0.96548 0.90386 0.89464 0.87314 0.80933 0.87208 0.77535 1.18229 1.18050 0.83705 0.75888 0.88319 0.90066 0.75740 0.92129 0.90925 0.89423 0.91399 0.89929 0.91404 0.89411 0.90931 0.92130 0.89507 0.87608 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.06 10.70 59.85 0.64 0.58 16 2 N -0.40 -0.31 3.16 -120.24 -0.38 -0.69 16 3 C 0.03 -0.01 9.94 -16.92 -0.17 -0.18 16 4 C -0.21 -0.06 5.43 -105.02 -0.57 -0.63 16 5 C -0.03 0.00 3.02 36.01 0.11 0.11 16 6 O -0.54 -0.31 12.88 -35.23 -0.45 -0.76 16 7 Si 0.68 -0.88 30.60 -169.99 -5.20 -6.08 16 8 C -0.11 -0.09 10.29 -39.11 -0.40 -0.49 16 9 C -0.06 -0.09 6.89 -81.98 -0.56 -0.65 16 10 C 0.60 1.25 7.77 -12.85 -0.10 1.15 16 11 O -0.54 -2.58 14.25 5.19 0.07 -2.50 16 12 N -0.70 0.48 5.25 -54.33 -0.28 0.19 16 13 C 0.13 -0.19 4.29 -67.12 -0.29 -0.47 16 14 H 0.11 -0.04 7.53 -51.93 -0.39 -0.43 16 15 C -0.16 0.19 7.68 -25.92 -0.20 -0.01 16 16 C 0.14 -0.20 4.11 -67.12 -0.28 -0.48 16 17 H 0.12 -0.03 7.46 -51.92 -0.39 -0.42 16 18 N -0.70 0.39 5.36 -57.93 -0.31 0.08 16 19 C 0.65 1.69 8.06 54.06 0.44 2.13 16 20 O -0.57 -2.79 11.48 -19.28 -0.22 -3.01 16 21 O -0.37 -0.86 9.94 -40.30 -0.40 -1.26 16 22 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 23 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 24 C -0.14 0.09 8.85 37.15 0.33 0.42 16 25 C -0.18 -0.27 8.37 37.16 0.31 0.04 16 26 C -0.15 0.50 7.58 -25.92 -0.20 0.31 16 27 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 29 H 0.11 0.08 6.11 -51.94 -0.32 -0.24 16 30 H 0.17 -0.59 6.21 -52.48 -0.33 -0.91 16 31 H 0.11 0.04 7.96 -51.93 -0.41 -0.37 16 32 H 0.38 -1.18 8.70 45.56 0.40 -0.78 16 33 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 34 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 35 H 0.15 -0.11 7.45 -52.49 -0.39 -0.50 16 36 H 0.41 -0.97 7.60 -40.82 -0.31 -1.28 16 37 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 39 H 0.41 -1.09 8.84 -40.82 -0.36 -1.45 16 40 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 41 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 42 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 43 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 45 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 47 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 48 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 49 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 50 H 0.11 -0.49 8.12 -51.93 -0.42 -0.91 16 LS Contribution 405.05 15.07 6.10 6.10 Total: 0.00 -9.68 405.05 -9.61 -19.29 By element: Atomic # 1 Polarization: -5.52 SS G_CDS: -7.80 Total: -13.33 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -0.73 Total: 1.97 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.98 Total: -0.41 kcal Atomic # 8 Polarization: -6.54 SS G_CDS: -1.00 Total: -7.54 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.20 Total: -6.08 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -9.68 -9.61 -19.29 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_10803934.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.991 kcal (2) G-P(sol) polarization free energy of solvation -9.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.610 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.288 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.279 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds