Wall clock time and date at job start Sun Mar 7 2021 00:20:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35523 * 125.68396 * 2 1 4 4 C 1.35452 * 108.87867 * 179.97438 * 3 2 1 5 5 C 1.50699 * 126.07079 * 179.97438 * 4 3 2 6 6 O 1.42895 * 109.47421 * 244.97845 * 5 4 3 7 7 Si 1.86290 * 109.47140 * 4.98352 * 5 4 3 8 8 C 1.39840 * 107.85983 * 359.74544 * 4 3 2 9 9 C 1.37653 * 125.67104 * 179.97438 * 2 1 3 10 10 C 1.46674 * 126.23870 * 0.02562 * 9 2 1 11 11 O 1.21701 * 119.99711 * 5.20906 * 10 9 2 12 12 N 1.34778 * 120.00171 * 185.21658 * 10 9 2 13 13 C 1.46504 * 119.99981 * 174.48077 * 12 10 9 14 14 H 1.08999 * 112.84724 * 336.19516 * 13 12 10 15 15 C 1.53774 * 113.61431 * 107.49953 * 13 12 10 16 16 C 1.53787 * 87.07949 * 89.11920 * 15 13 12 17 17 H 1.09007 * 113.68655 * 270.86968 * 16 15 13 18 18 N 1.46496 * 113.61625 * 139.98377 * 16 15 13 19 19 C 1.34777 * 120.00375 * 107.50259 * 18 16 15 20 20 O 1.21514 * 119.99852 * 359.97438 * 19 18 16 21 21 O 1.34632 * 120.00042 * 180.02562 * 19 18 16 22 22 C 1.45204 * 117.00044 * 179.97438 * 21 19 18 23 23 C 1.53004 * 109.46950 * 59.99905 * 22 21 19 24 24 C 1.52994 * 109.47464 * 179.97438 * 22 21 19 25 25 C 1.53001 * 109.47104 * 300.00066 * 22 21 19 26 26 C 1.53777 * 113.61422 * 205.00210 * 13 12 10 27 27 H 1.09006 * 109.46718 * 272.07033 * 1 2 3 28 28 H 1.09002 * 109.46770 * 32.06352 * 1 2 3 29 29 H 1.08987 * 109.47635 * 152.06626 * 1 2 3 30 30 H 1.08004 * 125.56333 * 0.02562 * 3 2 1 31 31 H 1.09007 * 109.46411 * 124.97916 * 5 4 3 32 32 H 0.96700 * 113.99684 * 60.00271 * 6 5 4 33 33 H 1.48500 * 110.00370 * 58.67517 * 7 5 4 34 34 H 1.48503 * 109.99984 * 179.97438 * 7 5 4 35 35 H 1.08002 * 126.46140 * 180.26324 * 8 4 3 36 36 H 0.96995 * 120.00170 * 354.20783 * 12 10 9 37 37 H 1.09002 * 113.61629 * 203.66013 * 15 13 12 38 38 H 1.08998 * 113.61813 * 334.57300 * 15 13 12 39 39 H 0.97002 * 119.99867 * 287.49923 * 18 16 15 40 40 H 1.09000 * 109.47018 * 59.99791 * 23 22 21 41 41 H 1.08994 * 109.46760 * 180.02562 * 23 22 21 42 42 H 1.09001 * 109.46878 * 300.00011 * 23 22 21 43 43 H 1.08999 * 109.46878 * 59.99851 * 24 22 21 44 44 H 1.08993 * 109.47578 * 180.02562 * 24 22 21 45 45 H 1.09004 * 109.47238 * 300.00157 * 24 22 21 46 46 H 1.09001 * 109.47375 * 59.99590 * 25 22 21 47 47 H 1.09005 * 109.47173 * 179.97438 * 25 22 21 48 48 H 1.08999 * 109.46981 * 299.99991 * 25 22 21 49 49 H 1.09000 * 113.61454 * 25.42683 * 26 13 12 50 50 H 1.08997 * 113.61764 * 156.33750 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1008 0.0000 4 6 3.5522 0.7092 0.0006 5 6 4.7538 1.6187 0.0002 6 8 5.4778 1.4510 -1.2203 7 14 4.1928 3.3887 0.1515 8 6 3.5780 -0.6890 0.0069 9 6 2.2677 -1.1183 0.0005 10 6 1.8123 -2.5125 0.0006 11 8 0.6256 -2.7650 -0.0955 12 7 2.7079 -3.5140 0.1072 13 6 2.2467 -4.8992 0.2291 14 1 1.2352 -4.9750 0.6281 15 6 2.4750 -5.7383 -1.0391 16 6 3.8561 -6.0913 -0.4620 17 1 4.6402 -5.3874 -0.7411 18 7 4.2425 -7.4879 -0.6769 19 6 5.1994 -7.7917 -1.5761 20 8 5.7414 -6.9071 -2.2088 21 8 5.5541 -9.0753 -1.7740 22 6 6.5913 -9.3284 -2.7581 23 6 7.8749 -8.6064 -2.3435 24 6 6.8576 -10.8326 -2.8432 25 6 6.1347 -8.8128 -4.1244 26 6 3.2557 -5.8251 0.9286 27 1 -0.3633 0.0371 1.0271 28 1 -0.3633 0.8709 -0.5456 29 1 -0.3634 -0.9078 -0.4813 30 1 1.9083 2.1235 0.0004 31 1 5.3988 1.3687 0.8427 32 1 4.9643 1.6564 -2.0135 33 1 3.4113 3.5689 1.4013 34 1 5.3687 4.2958 0.1529 35 1 4.4582 -1.3147 0.0129 36 1 3.6578 -3.3181 0.0993 37 1 1.8052 -6.5942 -1.1229 38 1 2.5221 -5.1453 -1.9525 39 1 3.8096 -8.1941 -0.1720 40 1 8.2002 -8.9737 -1.3701 41 1 8.6533 -8.7960 -3.0825 42 1 7.6855 -7.5347 -2.2826 43 1 5.9433 -11.3473 -3.1383 44 1 7.6365 -11.0226 -3.5816 45 1 7.1831 -11.1996 -1.8697 46 1 5.9453 -7.7411 -4.0635 47 1 6.9135 -9.0024 -4.8631 48 1 5.2202 -9.3271 -4.4197 49 1 3.9331 -5.3021 1.6037 50 1 2.7994 -6.7047 1.3827 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_10803934.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:20:24 Heat of formation + Delta-G solvation = -69.287037 kcal Electronic energy + Delta-G solvation = -31458.047286 eV Core-core repulsion = 27068.021281 eV Total energy + Delta-G solvation = -4390.026005 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.58904 -41.94296 -40.99729 -39.44595 -37.95569 -37.64264 -35.64050 -34.96796 -33.99401 -33.27074 -30.75858 -28.38670 -28.33038 -28.31752 -26.82520 -26.30728 -25.60767 -24.01689 -23.08783 -21.50860 -21.13346 -20.78726 -20.32542 -19.21234 -18.81278 -18.06235 -17.62229 -17.20862 -17.10019 -16.79729 -16.72392 -16.46158 -15.94469 -15.77468 -15.56267 -15.42658 -15.34984 -15.07725 -14.73482 -14.50359 -14.42398 -14.08060 -13.90659 -13.57568 -13.50358 -13.37885 -13.25724 -13.16491 -13.14173 -13.12188 -12.92874 -12.88321 -12.56376 -12.31881 -12.27151 -11.99175 -11.93484 -11.69535 -11.41120 -11.20967 -11.12594 -10.33095 -10.29735 -10.13370 -9.71320 -9.27660 -4.94682 0.36736 1.15663 1.41880 1.51378 1.54516 1.71287 1.73410 2.04620 2.23519 2.26405 3.12680 3.30967 3.45550 3.61914 3.71066 3.72516 3.77208 3.80713 3.84192 3.92729 3.94061 4.04031 4.24381 4.36749 4.40036 4.40696 4.53397 4.59383 4.63306 4.65840 4.68213 4.70661 4.74653 4.75742 4.76041 4.81955 4.82964 4.86013 4.92215 4.94631 5.09930 5.18617 5.23488 5.25261 5.33116 5.48682 5.57701 5.65709 5.86963 6.16254 6.36316 6.39759 6.89864 7.04859 7.32272 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.411 5.411 3 C 0.037 3.963 4 C -0.221 4.221 5 C -0.039 4.039 6 O -0.561 6.561 7 Si 0.781 3.219 8 C -0.114 4.114 9 C -0.080 4.080 10 C 0.592 3.408 11 O -0.578 6.578 12 N -0.694 5.694 13 C 0.125 3.875 14 H 0.105 0.895 15 C -0.162 4.162 16 C 0.137 3.863 17 H 0.106 0.894 18 N -0.688 5.688 19 C 0.642 3.358 20 O -0.594 6.594 21 O -0.370 6.370 22 C 0.128 3.872 23 C -0.180 4.180 24 C -0.138 4.138 25 C -0.180 4.180 26 C -0.131 4.131 27 H 0.082 0.918 28 H 0.115 0.885 29 H 0.088 0.912 30 H 0.204 0.796 31 H 0.101 0.899 32 H 0.393 0.607 33 H -0.282 1.282 34 H -0.305 1.305 35 H 0.153 0.847 36 H 0.413 0.587 37 H 0.107 0.893 38 H 0.060 0.940 39 H 0.419 0.581 40 H 0.062 0.938 41 H 0.086 0.914 42 H 0.064 0.936 43 H 0.069 0.931 44 H 0.098 0.902 45 H 0.070 0.930 46 H 0.063 0.937 47 H 0.086 0.914 48 H 0.061 0.939 49 H 0.096 0.904 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.812 -0.757 0.813 2.125 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.083 5.083 3 C -0.100 4.100 4 C -0.227 4.227 5 C -0.149 4.149 6 O -0.369 6.369 7 Si 0.687 3.313 8 C -0.140 4.140 9 C -0.192 4.192 10 C 0.381 3.619 11 O -0.459 6.459 12 N -0.345 5.345 13 C 0.019 3.981 14 H 0.123 0.877 15 C -0.202 4.202 16 C 0.033 3.967 17 H 0.124 0.876 18 N -0.348 5.348 19 C 0.396 3.604 20 O -0.485 6.485 21 O -0.284 6.284 22 C 0.091 3.909 23 C -0.237 4.237 24 C -0.195 4.195 25 C -0.238 4.238 26 C -0.169 4.169 27 H 0.100 0.900 28 H 0.134 0.866 29 H 0.106 0.894 30 H 0.220 0.780 31 H 0.118 0.882 32 H 0.242 0.758 33 H -0.209 1.209 34 H -0.233 1.233 35 H 0.171 0.829 36 H 0.251 0.749 37 H 0.126 0.874 38 H 0.079 0.921 39 H 0.257 0.743 40 H 0.081 0.919 41 H 0.105 0.895 42 H 0.083 0.917 43 H 0.088 0.912 44 H 0.116 0.884 45 H 0.089 0.911 46 H 0.082 0.918 47 H 0.105 0.895 48 H 0.080 0.920 49 H 0.114 0.886 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.244 -0.081 1.294 2.591 hybrid contribution 0.547 -0.661 0.340 0.923 sum -1.697 -0.742 1.633 2.469 Atomic orbital electron populations 1.22488 0.74729 1.06313 1.04664 1.44030 1.07689 1.04720 1.51856 1.22345 0.89653 0.92587 1.05393 1.19904 0.94319 0.94705 1.13806 1.24500 0.92493 1.08509 0.89424 1.86448 1.42174 1.92214 1.16056 0.93971 0.80293 0.72312 0.84703 1.21416 0.94299 0.95340 1.02976 1.20019 0.90895 0.87619 1.20713 1.17135 0.85265 0.84172 0.75290 1.90772 1.17610 1.85274 1.52279 1.45280 1.10048 1.05347 1.73817 1.21654 0.99850 0.79447 0.97109 0.87658 1.23997 0.97388 1.00576 0.98212 1.22687 0.95827 0.80815 0.97322 0.87595 1.44723 1.38760 1.09976 1.41292 1.18450 0.80093 0.81617 0.80252 1.90908 1.57576 1.48818 1.51196 1.86312 1.56133 1.26271 1.59692 1.22340 0.84836 0.97666 0.86024 1.22475 0.96686 1.01916 1.02646 1.21891 1.03440 0.90176 1.03986 1.22475 1.02628 1.02695 0.95958 1.23740 0.97457 1.00354 0.95389 0.89994 0.86619 0.89355 0.77984 0.88186 0.75763 1.20890 1.23342 0.82949 0.74947 0.87449 0.92141 0.74325 0.91854 0.89541 0.91748 0.91205 0.88366 0.91105 0.91832 0.89504 0.92015 0.88559 0.85479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 10.70 127.77 1.37 1.26 16 2 N -0.41 -0.68 3.16 -534.32 -1.69 -2.37 16 3 C 0.04 -0.07 9.94 83.48 0.83 0.76 16 4 C -0.22 -0.11 5.43 -20.12 -0.11 -0.22 16 5 C -0.04 0.01 3.02 71.24 0.22 0.23 16 6 O -0.56 -0.68 12.88 -148.98 -1.92 -2.60 16 7 Si 0.78 -2.40 30.60 68.60 2.10 -0.30 16 8 C -0.11 -0.25 10.29 22.57 0.23 -0.02 16 9 C -0.08 -0.34 6.89 40.35 0.28 -0.06 16 10 C 0.59 3.39 7.77 86.45 0.67 4.07 16 11 O -0.58 -6.61 14.25 -4.35 -0.06 -6.67 16 12 N -0.69 0.11 5.25 -444.00 -2.33 -2.22 16 13 C 0.13 -0.27 4.29 45.51 0.20 -0.08 16 14 H 0.11 0.01 7.53 -2.39 -0.02 -0.01 16 15 C -0.16 0.20 7.68 31.12 0.24 0.44 16 16 C 0.14 -0.32 4.11 45.52 0.19 -0.13 16 17 H 0.11 0.09 7.46 -2.38 -0.02 0.07 16 18 N -0.69 0.59 5.36 -567.60 -3.04 -2.46 16 19 C 0.64 3.98 8.06 129.79 1.05 5.03 16 20 O -0.59 -6.96 11.48 19.80 0.23 -6.74 16 21 O -0.37 -1.93 9.94 -55.41 -0.55 -2.48 16 22 C 0.13 0.38 1.13 -10.79 -0.01 0.37 16 23 C -0.18 -0.58 8.37 71.98 0.60 0.02 16 24 C -0.14 0.28 8.85 71.98 0.64 0.92 16 25 C -0.18 -0.66 8.37 71.98 0.60 -0.05 16 26 C -0.13 0.94 7.58 31.12 0.24 1.18 16 27 H 0.08 -0.23 8.14 -2.38 -0.02 -0.25 16 28 H 0.12 -0.93 8.14 -2.39 -0.02 -0.95 16 29 H 0.09 0.26 6.11 -2.39 -0.01 0.24 16 30 H 0.20 -1.80 6.21 -2.91 -0.02 -1.82 16 31 H 0.10 0.13 7.96 -2.38 -0.02 0.11 16 32 H 0.39 -2.58 8.70 -74.06 -0.64 -3.22 16 33 H -0.28 -0.32 7.11 99.48 0.71 0.39 16 34 H -0.31 -1.61 7.11 99.48 0.71 -0.90 16 35 H 0.15 -0.09 7.45 -2.91 -0.02 -0.12 16 36 H 0.41 -1.52 7.60 -92.71 -0.70 -2.22 16 37 H 0.11 -0.33 8.14 -2.39 -0.02 -0.35 16 38 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 39 H 0.42 -2.46 8.84 -92.71 -0.82 -3.28 16 40 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 41 H 0.09 -0.01 8.14 -2.39 -0.02 -0.02 16 42 H 0.06 0.54 5.88 -2.39 -0.01 0.53 16 43 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 44 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 45 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 46 H 0.06 0.58 5.88 -2.39 -0.01 0.56 16 47 H 0.09 0.02 8.14 -2.38 -0.02 0.00 16 48 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 49 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 50 H 0.13 -1.39 8.12 -2.39 -0.02 -1.41 16 Total: 0.00 -24.76 405.05 -1.19 -25.95 By element: Atomic # 1 Polarization: -12.70 SS G_CDS: -1.14 Total: -13.85 kcal Atomic # 6 Polarization: 6.50 SS G_CDS: 7.22 Total: 13.71 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -7.06 Total: -7.04 kcal Atomic # 8 Polarization: -16.17 SS G_CDS: -2.30 Total: -18.48 kcal Atomic # 14 Polarization: -2.40 SS G_CDS: 2.10 Total: -0.30 kcal Total: -24.76 -1.19 -25.95 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_10803934.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.337 kcal (2) G-P(sol) polarization free energy of solvation -24.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.950 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.287 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds