Wall clock time and date at job start Sun Mar 7 2021 00:20:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46491 * 1 3 3 C 1.37657 * 125.67387 * 2 1 4 4 C 1.46675 * 126.23534 * 0.02562 * 3 2 1 5 5 O 1.21700 * 119.99567 * 5.28616 * 4 3 2 6 6 N 1.34771 * 120.00218 * 185.28750 * 4 3 2 7 7 C 1.46505 * 120.00206 * 174.94685 * 6 4 3 8 8 H 1.09007 * 112.90333 * 23.75131 * 7 6 4 9 9 C 1.53775 * 113.61315 * 155.00001 * 7 6 4 10 10 C 1.53782 * 87.08227 * 89.12127 * 9 7 6 11 11 H 1.09006 * 113.61158 * 270.79967 * 10 9 7 12 12 N 1.46495 * 113.61743 * 139.98309 * 10 9 7 13 13 C 1.34773 * 120.00272 * 155.00074 * 12 10 9 14 14 O 1.21509 * 119.99848 * 359.97438 * 13 12 10 15 15 O 1.34634 * 120.00453 * 179.97438 * 13 12 10 16 16 C 1.45195 * 117.00545 * 179.97438 * 15 13 12 17 17 C 1.53003 * 109.47209 * 59.99652 * 16 15 13 18 18 C 1.52999 * 109.47326 * 179.97438 * 16 15 13 19 19 C 1.53000 * 109.47002 * 299.99981 * 16 15 13 20 20 C 1.53775 * 87.07976 * 25.42805 * 10 9 7 21 21 C 1.37877 * 107.53206 * 180.28179 * 3 2 1 22 22 C 1.39840 * 107.08226 * 359.58866 * 21 3 2 23 23 C 1.35449 * 107.86756 * 0.41299 * 22 21 3 24 24 C 1.50694 * 125.56457 * 179.76176 * 23 22 21 25 25 O 1.42898 * 109.47170 * 149.97977 * 24 23 22 26 26 Si 1.86292 * 109.47142 * 29.97611 * 24 23 22 27 27 H 1.09001 * 109.47142 * 95.78570 * 1 2 3 28 28 H 1.09004 * 109.46892 * 215.77939 * 1 2 3 29 29 H 1.09001 * 109.47748 * 335.78021 * 1 2 3 30 30 H 0.97003 * 120.00011 * 354.94707 * 6 4 3 31 31 H 1.09002 * 113.62036 * 334.56646 * 9 7 6 32 32 H 1.08998 * 113.61446 * 203.66560 * 9 7 6 33 33 H 0.97005 * 119.99903 * 334.99445 * 12 10 9 34 34 H 1.09003 * 109.47270 * 60.00253 * 17 16 15 35 35 H 1.08994 * 109.47070 * 180.02562 * 17 16 15 36 36 H 1.08998 * 109.47149 * 300.00287 * 17 16 15 37 37 H 1.09000 * 109.46884 * 60.00315 * 18 16 15 38 38 H 1.09004 * 109.47215 * 179.97438 * 18 16 15 39 39 H 1.08995 * 109.47370 * 300.00061 * 18 16 15 40 40 H 1.08998 * 109.47202 * 59.99807 * 19 16 15 41 41 H 1.09004 * 109.47249 * 180.02562 * 19 16 15 42 42 H 1.09000 * 109.47226 * 299.99696 * 19 16 15 43 43 H 1.09005 * 113.61347 * 89.12198 * 20 10 9 44 44 H 1.08999 * 113.62065 * 220.02055 * 20 10 9 45 45 H 1.07999 * 126.45474 * 179.74013 * 21 3 2 46 46 H 1.08001 * 126.06031 * 180.15641 * 22 21 3 47 47 H 1.09005 * 109.46988 * 269.97829 * 24 23 22 48 48 H 0.96699 * 114.00000 * 299.99744 * 25 24 23 49 49 H 1.48503 * 109.99780 * 58.68407 * 26 24 23 50 50 H 1.48499 * 110.00183 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2677 1.1183 0.0000 4 6 1.8122 2.5125 0.0005 5 8 0.6257 2.7649 0.0981 6 7 2.7076 3.5140 -0.1071 7 6 2.2465 4.9002 -0.2181 8 1 1.2499 5.0502 0.1971 9 6 3.2777 5.9330 0.2664 10 6 3.8251 5.9441 -1.1706 11 1 4.6008 5.1991 -1.3481 12 7 4.1984 7.2784 -1.6461 13 6 5.1202 7.4133 -2.6201 14 8 5.6419 6.4281 -3.1034 15 8 5.4630 8.6396 -3.0575 16 6 6.4628 8.7092 -4.1081 17 6 5.9588 7.9585 -5.3423 18 6 6.7196 10.1730 -4.4716 19 6 7.7632 8.0693 -3.6178 20 6 2.4249 5.4980 -1.6236 21 6 3.5779 0.6890 -0.0065 22 6 3.5521 -0.7092 -0.0008 23 6 2.2555 -1.1009 -0.0004 24 6 1.7710 -2.5278 -0.0002 25 8 0.5134 -2.6038 0.6742 26 14 3.0122 -3.6049 0.8772 27 1 -0.3633 -0.1036 -1.0224 28 1 -0.3633 -0.8338 0.6009 29 1 -0.3634 0.9372 0.4216 30 1 3.6575 3.3170 -0.1111 31 1 3.9814 5.5371 0.9988 32 1 2.8354 6.8810 0.5725 33 1 3.7821 8.0650 -1.2601 34 1 5.0323 8.4143 -5.6917 35 1 6.7095 8.0104 -6.1308 36 1 5.7755 6.9156 -5.0836 37 1 7.0786 10.7081 -3.5925 38 1 7.4705 10.2253 -5.2601 39 1 5.7931 10.6285 -4.8211 40 1 7.5800 7.0264 -3.3591 41 1 8.5139 8.1219 -4.4063 42 1 8.1223 8.6040 -2.7385 43 1 1.7494 6.3272 -1.8343 44 1 2.4399 4.7510 -2.4172 45 1 4.4582 1.3146 -0.0121 46 1 4.4133 -1.3609 -0.0012 47 1 1.6536 -2.8719 -1.0278 48 1 0.5430 -2.3124 1.5957 49 1 3.2049 -3.1267 2.2699 50 1 2.5457 -5.0147 0.8849 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_10803936.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:20:28 Heat of formation + Delta-G solvation = -66.025962 kcal Electronic energy + Delta-G solvation = -31496.840351 eV Core-core repulsion = 27106.955757 eV Total energy + Delta-G solvation = -4389.884594 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.60678 -41.85588 -40.98649 -39.39123 -37.98538 -37.78924 -35.52123 -34.88788 -33.89980 -33.21058 -31.23961 -28.32388 -28.28241 -27.55842 -27.15563 -26.95225 -25.69301 -23.47066 -23.02185 -21.72264 -21.12642 -20.68224 -20.41296 -19.13637 -18.82613 -18.25689 -17.80549 -17.16369 -17.06871 -16.92779 -16.60277 -16.30595 -16.05130 -15.79146 -15.44162 -15.34588 -15.23947 -14.92536 -14.70103 -14.43687 -14.40157 -14.27584 -13.91885 -13.81689 -13.72070 -13.42788 -13.24699 -13.14076 -13.10713 -12.92725 -12.84427 -12.82124 -12.47292 -12.34403 -12.23307 -12.01296 -11.94859 -11.76057 -11.29038 -11.17578 -10.96451 -10.77538 -10.29440 -10.08917 -9.72453 -9.09310 -4.99076 0.39657 1.10076 1.20391 1.49559 1.64666 1.72617 1.87184 1.94732 2.31411 2.37047 3.05650 3.10580 3.23281 3.35149 3.53079 3.66525 3.74734 3.78150 3.83643 3.84421 3.97767 4.00694 4.32538 4.37008 4.38639 4.43384 4.48723 4.52124 4.53382 4.57085 4.63541 4.65259 4.71242 4.78665 4.79582 4.85615 4.89383 4.92094 4.93665 5.00463 5.08815 5.14552 5.22605 5.36957 5.41373 5.49114 5.60460 5.69073 5.97821 6.12618 6.19644 6.39392 6.42452 7.13723 7.42417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.391 5.391 3 C -0.055 4.055 4 C 0.596 3.404 5 O -0.544 6.544 6 N -0.703 5.703 7 C 0.127 3.873 8 H 0.115 0.885 9 C -0.152 4.152 10 C 0.140 3.860 11 H 0.120 0.880 12 N -0.702 5.702 13 C 0.650 3.350 14 O -0.566 6.566 15 O -0.365 6.365 16 C 0.137 3.863 17 C -0.184 4.184 18 C -0.142 4.142 19 C -0.184 4.184 20 C -0.165 4.165 21 C -0.133 4.133 22 C -0.197 4.197 23 C 0.014 3.986 24 C -0.056 4.056 25 O -0.532 6.532 26 Si 0.719 3.281 27 H 0.074 0.926 28 H 0.100 0.900 29 H 0.105 0.895 30 H 0.405 0.595 31 H 0.087 0.913 32 H 0.105 0.895 33 H 0.407 0.593 34 H 0.060 0.940 35 H 0.072 0.928 36 H 0.087 0.913 37 H 0.067 0.933 38 H 0.082 0.918 39 H 0.067 0.933 40 H 0.087 0.913 41 H 0.072 0.928 42 H 0.060 0.940 43 H 0.098 0.902 44 H 0.080 0.920 45 H 0.147 0.853 46 H 0.154 0.846 47 H 0.124 0.876 48 H 0.378 0.622 49 H -0.257 1.257 50 H -0.255 1.255 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.456 1.540 0.772 3.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 N -0.064 5.064 3 C -0.169 4.169 4 C 0.385 3.615 5 O -0.423 6.423 6 N -0.355 5.355 7 C 0.021 3.979 8 H 0.133 0.867 9 C -0.191 4.191 10 C 0.036 3.964 11 H 0.138 0.862 12 N -0.360 5.360 13 C 0.404 3.596 14 O -0.455 6.455 15 O -0.280 6.280 16 C 0.100 3.900 17 C -0.241 4.241 18 C -0.199 4.199 19 C -0.241 4.241 20 C -0.206 4.206 21 C -0.160 4.160 22 C -0.221 4.221 23 C -0.104 4.104 24 C -0.165 4.165 25 O -0.338 6.338 26 Si 0.618 3.382 27 H 0.092 0.908 28 H 0.118 0.882 29 H 0.123 0.877 30 H 0.241 0.759 31 H 0.105 0.895 32 H 0.124 0.876 33 H 0.243 0.757 34 H 0.079 0.921 35 H 0.091 0.909 36 H 0.106 0.894 37 H 0.086 0.914 38 H 0.101 0.899 39 H 0.086 0.914 40 H 0.106 0.894 41 H 0.091 0.909 42 H 0.079 0.921 43 H 0.117 0.883 44 H 0.099 0.901 45 H 0.165 0.835 46 H 0.171 0.829 47 H 0.142 0.858 48 H 0.226 0.774 49 H -0.181 1.181 50 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges 2.453 0.555 0.613 2.589 hybrid contribution -0.590 0.872 0.596 1.210 sum 1.863 1.427 1.209 2.640 Atomic orbital electron populations 1.22636 0.75612 1.06362 1.04414 1.43757 1.06986 1.04032 1.51599 1.19977 0.90580 0.87369 1.18968 1.16953 0.85453 0.83523 0.75543 1.90788 1.16346 1.84695 1.50465 1.45270 1.09868 1.05281 1.75042 1.21619 0.99683 0.79844 0.96773 0.86718 1.23795 0.98576 1.00246 0.96444 1.22674 0.96523 0.83526 0.93702 0.86228 1.44735 1.42536 1.09808 1.38921 1.18175 0.79419 0.82211 0.79817 1.90914 1.56391 1.38711 1.59457 1.86307 1.57961 1.29747 1.53980 1.22117 0.85957 0.97117 0.84791 1.22522 1.01827 1.03094 0.96688 1.21880 1.02859 0.92753 1.02431 1.22520 0.95944 1.03601 1.02028 1.24028 0.97032 1.01566 0.97933 1.21311 0.94335 0.95284 1.05053 1.20553 0.94934 0.95223 1.11405 1.21091 0.91096 0.89126 1.09124 1.24940 0.93219 0.94539 1.03836 1.86590 1.29910 1.88312 1.29034 0.94371 0.84786 0.77351 0.81730 0.90777 0.88195 0.87699 0.75904 0.89488 0.87645 0.75733 0.92140 0.90936 0.89417 0.91401 0.89930 0.91401 0.89420 0.90933 0.92131 0.88314 0.90113 0.83505 0.82862 0.85839 0.77377 1.18120 1.17921 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.07 10.32 59.84 0.62 0.69 16 2 N -0.39 -0.83 3.16 -115.62 -0.37 -1.19 16 3 C -0.05 -0.11 6.89 -81.98 -0.56 -0.68 16 4 C 0.60 1.46 7.77 -12.86 -0.10 1.37 16 5 O -0.54 -2.95 14.12 5.19 0.07 -2.88 16 6 N -0.70 0.53 5.25 -54.32 -0.29 0.25 16 7 C 0.13 -0.18 4.35 -67.12 -0.29 -0.47 16 8 H 0.11 -0.01 7.42 -51.93 -0.39 -0.40 16 9 C -0.15 0.53 7.58 -25.92 -0.20 0.33 16 10 C 0.14 -0.24 4.12 -67.12 -0.28 -0.51 16 11 H 0.12 -0.09 7.46 -51.93 -0.39 -0.47 16 12 N -0.70 0.56 5.36 -57.94 -0.31 0.25 16 13 C 0.65 1.51 8.06 54.05 0.44 1.94 16 14 O -0.57 -2.57 11.48 -19.28 -0.22 -2.79 16 15 O -0.37 -0.78 9.94 -40.31 -0.40 -1.18 16 16 C 0.14 0.15 1.13 -90.62 -0.10 0.05 16 17 C -0.18 -0.23 8.37 37.16 0.31 0.08 16 18 C -0.14 0.12 8.85 37.16 0.33 0.45 16 19 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 20 C -0.17 0.21 7.68 -25.92 -0.20 0.01 16 21 C -0.13 -0.01 10.36 -39.11 -0.41 -0.42 16 22 C -0.20 0.05 9.37 -39.98 -0.37 -0.32 16 23 C 0.01 0.01 6.14 -81.95 -0.50 -0.49 16 24 C -0.06 0.04 2.99 36.00 0.11 0.15 16 25 O -0.53 -0.07 10.11 -35.23 -0.36 -0.43 16 26 Si 0.72 -1.27 31.10 -169.99 -5.29 -6.56 16 27 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 28 H 0.10 0.01 5.25 -51.93 -0.27 -0.27 16 29 H 0.10 0.29 5.91 -51.93 -0.31 -0.02 16 30 H 0.41 -1.17 7.60 -40.82 -0.31 -1.48 16 31 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 32 H 0.11 -0.49 8.12 -51.93 -0.42 -0.91 16 33 H 0.41 -1.16 8.84 -40.82 -0.36 -1.52 16 34 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 38 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 39 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.09 0.26 5.88 -51.93 -0.31 -0.04 16 41 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 42 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 43 H 0.10 -0.17 8.14 -51.93 -0.42 -0.60 16 44 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 45 H 0.15 -0.40 7.45 -52.49 -0.39 -0.79 16 46 H 0.15 -0.48 6.85 -52.49 -0.36 -0.84 16 47 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 48 H 0.38 -0.84 8.31 45.56 0.38 -0.46 16 49 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 50 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 LS Contribution 399.58 15.07 6.02 6.02 Total: 0.00 -9.25 399.58 -9.72 -18.97 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -7.69 Total: -12.75 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: -0.90 Total: 2.28 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.96 Total: -0.70 kcal Atomic # 8 Polarization: -6.37 SS G_CDS: -0.90 Total: -7.27 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.29 Total: -6.56 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.25 -9.72 -18.97 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_10803936.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.056 kcal (2) G-P(sol) polarization free energy of solvation -9.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.304 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.722 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.970 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds