Wall clock time and date at job start Sun Mar 7 2021 00:20:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53006 * 109.47434 * 2 1 4 4 C 1.52995 * 109.47399 * 239.99628 * 2 1 3 5 5 O 1.45208 * 109.47185 * 119.99483 * 2 1 3 6 6 C 1.34632 * 116.99497 * 60.00244 * 5 2 1 7 7 O 1.21511 * 120.00754 * 0.27100 * 6 5 2 8 8 N 1.34784 * 119.99600 * 180.02562 * 6 5 2 9 9 C 1.46499 * 119.99971 * 179.97438 * 8 6 5 10 10 H 1.09001 * 112.84942 * 25.33046 * 9 8 6 11 11 C 1.53781 * 113.61562 * 156.52736 * 9 8 6 12 12 C 1.53787 * 87.07813 * 139.98287 * 11 9 8 13 13 H 1.09008 * 113.60939 * 219.93611 * 12 11 9 14 14 N 1.46494 * 113.61603 * 89.12161 * 12 11 9 15 15 C 1.34774 * 120.00687 * 154.99606 * 14 12 11 16 16 O 1.21576 * 119.99443 * 359.97438 * 15 14 12 17 17 C 1.47691 * 120.00661 * 179.97438 * 15 14 12 18 18 C 1.39823 * 120.16651 * 179.72513 * 17 15 14 19 19 F 1.35095 * 120.11072 * 359.97438 * 18 17 15 20 20 C 1.38328 * 119.77468 * 179.76747 * 18 17 15 21 21 C 1.38200 * 120.11960 * 0.48270 * 20 18 17 22 22 C 1.38460 * 120.33892 * 359.79504 * 21 20 18 23 23 C 1.50700 * 119.89098 * 179.97438 * 22 21 20 24 24 O 1.42891 * 109.47409 * 119.97186 * 23 22 21 25 25 Si 1.86301 * 109.47114 * 359.96952 * 23 22 21 26 26 C 1.37861 * 120.21826 * 359.94397 * 22 21 20 27 27 C 1.53783 * 113.61722 * 254.13839 * 9 8 6 28 28 H 1.09011 * 109.46913 * 300.00328 * 1 2 3 29 29 H 1.08999 * 109.46952 * 60.00426 * 1 2 3 30 30 H 1.08996 * 109.47301 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.47261 * 179.97438 * 3 2 1 32 32 H 1.08999 * 109.46703 * 299.99726 * 3 2 1 33 33 H 1.08994 * 109.47350 * 59.99586 * 3 2 1 34 34 H 1.09005 * 109.47242 * 300.00024 * 4 2 1 35 35 H 1.08999 * 109.47112 * 60.00044 * 4 2 1 36 36 H 1.08998 * 109.47402 * 180.02562 * 4 2 1 37 37 H 0.96999 * 120.00044 * 359.97438 * 8 6 5 38 38 H 1.08999 * 113.61210 * 254.53117 * 11 9 8 39 39 H 1.08996 * 113.61136 * 25.43568 * 11 9 8 40 40 H 0.97011 * 119.99894 * 334.99360 * 14 12 11 41 41 H 1.07999 * 119.93491 * 180.23222 * 20 18 17 42 42 H 1.08001 * 119.82943 * 179.76277 * 21 20 18 43 43 H 1.09001 * 109.46592 * 239.97059 * 23 22 21 44 44 H 0.96698 * 114.00375 * 299.99861 * 24 23 22 45 45 H 1.48493 * 109.99825 * 58.68246 * 25 23 22 46 46 H 1.48499 * 109.99827 * 180.02562 * 25 23 22 47 47 H 1.07994 * 120.05935 * 180.02562 * 26 22 21 48 48 H 1.09003 * 113.61223 * 334.56953 * 27 9 8 49 49 H 1.09001 * 113.61825 * 105.46860 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0140 -0.6844 1.1857 6 6 1.6522 -1.9722 1.3384 7 8 0.9553 -2.5110 0.5015 8 7 2.0672 -2.6653 2.4174 9 6 1.6732 -4.0664 2.5840 10 1 1.4464 -4.5577 1.6377 11 6 2.6259 -4.8715 3.4833 12 6 1.3747 -5.5435 4.0732 13 1 1.4277 -5.6948 5.1514 14 7 0.9589 -6.7475 3.3496 15 6 0.2455 -7.7008 3.9811 16 8 -0.0525 -7.5617 5.1515 17 6 -0.1742 -8.9143 3.2514 18 6 -0.9094 -9.9080 3.9048 19 9 -1.2384 -9.7621 5.2069 20 6 -1.3024 -11.0391 3.2122 21 6 -0.9610 -11.1912 1.8817 22 6 -0.2282 -10.2129 1.2315 23 6 0.1390 -10.3894 -0.2194 24 8 -0.4180 -9.3195 -0.9854 25 14 -0.5352 -12.0124 -0.8376 26 6 0.1662 -9.0775 1.9068 27 6 0.5975 -4.2798 3.6620 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6768 1.9563 -0.8900 33 1 1.6767 1.9564 0.8899 34 1 1.6767 -1.7490 -1.2491 35 1 1.6767 -0.2075 -2.1392 36 1 3.1300 -0.7217 -1.2489 37 1 2.6268 -2.2363 3.0836 38 1 3.2711 -5.5565 2.9332 39 1 3.1715 -4.2585 4.2007 40 1 1.1970 -6.8586 2.4157 41 1 -1.8736 -11.8066 3.7134 42 1 -1.2671 -12.0780 1.3466 43 1 1.2241 -10.3837 -0.3228 44 1 -1.3823 -9.2636 -0.9399 45 1 -2.0106 -12.0452 -0.6726 46 1 -0.1793 -12.1987 -2.2672 47 1 0.7374 -8.3159 1.3970 48 1 0.5875 -3.5047 4.4283 49 1 -0.3925 -4.4878 3.2560 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_12335834.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:20:45 Heat of formation + Delta-G solvation = -134.143351 kcal Electronic energy + Delta-G solvation = -33407.930552 eV Core-core repulsion = 28638.375580 eV Total energy + Delta-G solvation = -4769.554972 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.167 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -50.02802 -42.03576 -41.51907 -40.48016 -39.48445 -37.97323 -37.58689 -35.64731 -34.95337 -33.71555 -32.43685 -32.08926 -28.40041 -28.33071 -26.85547 -26.67206 -26.50942 -25.20499 -23.49733 -22.95968 -21.81979 -21.24201 -20.64434 -19.41643 -19.06385 -18.49312 -18.38149 -17.82544 -17.39545 -17.22050 -17.06397 -16.93085 -16.51564 -16.22816 -16.12860 -15.91082 -15.75623 -15.65480 -15.42611 -15.06890 -14.70129 -14.54834 -14.44159 -14.36081 -13.94729 -13.62629 -13.56855 -13.39387 -13.25538 -13.17262 -13.15387 -12.94390 -12.89553 -12.85712 -12.57567 -12.33356 -12.31073 -12.01067 -11.77729 -11.69409 -11.42409 -11.28981 -11.14368 -10.65921 -10.46269 -10.27288 -10.10889 -9.84308 -4.89265 -0.52155 -0.04620 1.14342 1.30135 1.56033 1.62839 1.70164 1.85571 2.01462 2.44564 3.02914 3.11082 3.27773 3.30994 3.40105 3.46161 3.50862 3.61148 3.71176 3.75413 3.78361 3.90739 3.91533 3.99135 4.08936 4.38163 4.46677 4.51755 4.57859 4.58220 4.62774 4.66836 4.70844 4.73391 4.76584 4.78888 4.81251 4.83943 4.84734 4.90226 4.91774 4.93847 5.08101 5.12457 5.21194 5.23872 5.31049 5.46488 5.56439 5.58333 6.27459 6.37033 6.48270 6.98352 7.30813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.643 3.357 7 O -0.594 6.594 8 N -0.689 5.689 9 C 0.139 3.861 10 H 0.108 0.892 11 C -0.128 4.128 12 C 0.119 3.881 13 H 0.102 0.898 14 N -0.695 5.695 15 C 0.559 3.441 16 O -0.567 6.567 17 C -0.189 4.189 18 C 0.135 3.865 19 F -0.136 7.136 20 C -0.152 4.152 21 C -0.050 4.050 22 C -0.132 4.132 23 C -0.078 4.078 24 O -0.546 6.546 25 Si 0.764 3.236 26 C -0.026 4.026 27 C -0.164 4.164 28 H 0.060 0.940 29 H 0.086 0.914 30 H 0.063 0.937 31 H 0.070 0.930 32 H 0.098 0.902 33 H 0.068 0.932 34 H 0.064 0.936 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.419 0.581 38 H 0.100 0.900 39 H 0.126 0.874 40 H 0.414 0.586 41 H 0.168 0.832 42 H 0.168 0.832 43 H 0.137 0.863 44 H 0.388 0.612 45 H -0.278 1.278 46 H -0.306 1.306 47 H 0.156 0.844 48 H 0.105 0.895 49 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.152 -1.662 -2.803 5.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.092 3.908 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.396 3.604 7 O -0.485 6.485 8 N -0.348 5.348 9 C 0.035 3.965 10 H 0.126 0.874 11 C -0.167 4.167 12 C 0.013 3.987 13 H 0.120 0.880 14 N -0.347 5.347 15 C 0.347 3.653 16 O -0.447 6.447 17 C -0.193 4.193 18 C 0.115 3.885 19 F -0.114 7.114 20 C -0.170 4.170 21 C -0.068 4.068 22 C -0.132 4.132 23 C -0.186 4.186 24 O -0.354 6.354 25 Si 0.670 3.330 26 C -0.044 4.044 27 C -0.204 4.204 28 H 0.079 0.921 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.089 0.911 32 H 0.116 0.884 33 H 0.087 0.913 34 H 0.083 0.917 35 H 0.104 0.896 36 H 0.082 0.918 37 H 0.257 0.743 38 H 0.119 0.881 39 H 0.145 0.855 40 H 0.252 0.748 41 H 0.186 0.814 42 H 0.185 0.815 43 H 0.155 0.845 44 H 0.237 0.763 45 H -0.205 1.205 46 H -0.235 1.235 47 H 0.173 0.827 48 H 0.124 0.876 49 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 3.705 -1.994 -3.082 5.216 hybrid contribution -0.856 1.216 0.045 1.487 sum 2.849 -0.779 -3.037 4.237 Atomic orbital electron populations 1.22476 0.94221 1.03629 1.03456 1.22339 0.94310 0.92615 0.81583 1.21895 1.02526 0.90896 1.04205 1.22475 1.01708 1.02275 0.97258 1.86316 1.71471 1.23387 1.47257 1.18444 0.78591 0.80796 0.82542 1.90904 1.42390 1.70857 1.44325 1.44728 1.54915 1.12119 1.23024 1.22677 0.96089 0.78991 0.98723 0.87400 1.23718 0.95780 0.98312 0.98859 1.21728 0.95995 0.83116 0.97847 0.87961 1.45475 1.54885 1.18964 1.15398 1.18292 0.77804 0.83181 0.86032 1.90845 1.56460 1.79686 1.17688 1.20027 1.06743 0.96159 0.96402 1.18197 0.96393 0.95419 0.78520 1.91560 1.90063 1.95763 1.34015 1.21394 1.02977 0.97097 0.95531 1.21387 0.93571 0.98549 0.93252 1.20402 1.00234 0.95164 0.97419 1.25213 1.05085 1.01037 0.87314 1.86602 1.27196 1.50828 1.70748 0.94184 0.79448 0.79280 0.80114 1.21177 0.95509 0.97572 0.90162 1.24040 0.98763 0.98167 0.99423 0.92067 0.89493 0.91846 0.91057 0.88366 0.91251 0.91689 0.89557 0.91805 0.74317 0.88112 0.85543 0.74790 0.81435 0.81494 0.84501 0.76288 1.20484 1.23471 0.82681 0.87628 0.92183 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.64 8.37 71.98 0.60 -0.04 16 2 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 3 C -0.14 0.29 8.85 71.98 0.64 0.93 16 4 C -0.18 -0.52 8.37 71.98 0.60 0.09 16 5 O -0.37 -1.86 9.94 -55.42 -0.55 -2.41 16 6 C 0.64 3.79 8.06 129.79 1.05 4.83 16 7 O -0.59 -6.68 11.50 19.81 0.23 -6.45 16 8 N -0.69 0.75 5.37 -567.60 -3.05 -2.30 16 9 C 0.14 -0.37 4.09 45.52 0.19 -0.19 16 10 H 0.11 -0.02 7.50 -2.39 -0.02 -0.04 16 11 C -0.13 0.96 7.58 31.12 0.24 1.20 16 12 C 0.12 -0.19 4.33 45.58 0.20 0.01 16 13 H 0.10 0.19 7.46 -2.38 -0.02 0.17 16 14 N -0.70 0.35 5.21 -442.77 -2.31 -1.95 16 15 C 0.56 3.84 7.77 86.74 0.67 4.51 16 16 O -0.57 -9.04 14.94 -3.96 -0.06 -9.10 16 17 C -0.19 -0.60 5.88 -20.05 -0.12 -0.72 16 18 C 0.14 0.66 7.29 22.67 0.17 0.82 16 19 F -0.14 -1.60 15.55 44.97 0.70 -0.90 16 20 C -0.15 0.37 10.01 22.28 0.22 0.59 16 21 C -0.05 0.32 8.66 22.31 0.19 0.51 16 22 C -0.13 0.71 5.39 -19.90 -0.11 0.60 16 23 C -0.08 0.50 2.82 71.24 0.20 0.70 16 24 O -0.55 1.44 12.76 -148.98 -1.90 -0.47 16 25 Si 0.76 -5.17 29.78 68.60 2.04 -3.13 16 26 C -0.03 0.08 9.09 22.52 0.20 0.28 16 27 C -0.16 0.12 7.69 31.18 0.24 0.36 16 28 H 0.06 0.19 8.14 -2.38 -0.02 0.17 16 29 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 30 H 0.06 0.56 5.89 -2.39 -0.01 0.55 16 31 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 32 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 33 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 34 H 0.06 0.52 5.87 -2.38 -0.01 0.50 16 35 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 36 H 0.06 0.12 8.14 -2.39 -0.02 0.11 16 37 H 0.42 -2.50 8.82 -92.71 -0.82 -3.32 16 38 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 39 H 0.13 -1.38 8.11 -2.39 -0.02 -1.40 16 40 H 0.41 -2.38 6.73 -92.70 -0.62 -3.01 16 41 H 0.17 -1.11 8.06 -2.91 -0.02 -1.13 16 42 H 0.17 -1.95 4.86 -2.91 -0.01 -1.97 16 43 H 0.14 -1.23 7.96 -2.39 -0.02 -1.25 16 44 H 0.39 -2.90 8.70 -74.06 -0.64 -3.54 16 45 H -0.28 0.87 7.11 99.48 0.71 1.58 16 46 H -0.31 -0.71 7.11 99.48 0.71 0.00 16 47 H 0.16 -1.11 6.40 -2.91 -0.02 -1.13 16 48 H 0.11 -0.22 8.14 -2.39 -0.02 -0.24 16 49 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 Total: 0.00 -26.81 402.42 -0.75 -27.56 By element: Atomic # 1 Polarization: -14.68 SS G_CDS: -1.03 Total: -15.70 kcal Atomic # 6 Polarization: 9.67 SS G_CDS: 5.17 Total: 14.85 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -5.35 Total: -4.25 kcal Atomic # 8 Polarization: -16.15 SS G_CDS: -2.28 Total: -18.43 kcal Atomic # 9 Polarization: -1.60 SS G_CDS: 0.70 Total: -0.90 kcal Atomic # 14 Polarization: -5.17 SS G_CDS: 2.04 Total: -3.13 kcal Total: -26.81 -0.75 -27.56 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_12335834.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.580 kcal (2) G-P(sol) polarization free energy of solvation -26.815 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.395 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.564 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds