Wall clock time and date at job start Sun Mar 7 2021 00:20:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53001 * 109.47402 * 2 1 4 4 C 1.53004 * 109.47554 * 240.00073 * 2 1 3 5 5 O 1.45202 * 109.47316 * 119.99929 * 2 1 3 6 6 C 1.34636 * 116.99439 * 59.99945 * 5 2 1 7 7 O 1.21511 * 120.00512 * 0.02562 * 6 5 2 8 8 N 1.34774 * 119.99620 * 180.02562 * 6 5 2 9 9 C 1.46506 * 120.00180 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.84500 * 23.80476 * 9 8 6 11 11 C 1.53780 * 113.61482 * 154.99697 * 9 8 6 12 12 C 1.53779 * 87.08101 * 89.11998 * 11 9 8 13 13 H 1.09005 * 113.61091 * 270.80229 * 12 11 9 14 14 N 1.46499 * 113.61610 * 139.98128 * 12 11 9 15 15 C 1.34776 * 119.99774 * 156.52850 * 14 12 11 16 16 O 1.21277 * 120.00572 * 359.97438 * 15 14 12 17 17 C 1.50701 * 119.99830 * 180.02562 * 15 14 12 18 18 C 1.50700 * 109.47413 * 180.02562 * 17 15 14 19 19 C 1.38230 * 120.00384 * 89.99546 * 18 17 15 20 20 C 1.38236 * 119.99877 * 179.97438 * 19 18 17 21 21 C 1.38237 * 120.00186 * 0.02562 * 20 19 18 22 22 C 1.50696 * 119.99946 * 179.97438 * 21 20 19 23 23 O 1.42903 * 109.47131 * 299.99276 * 22 21 20 24 24 Si 1.86305 * 109.47185 * 179.97438 * 22 21 20 25 25 C 1.38238 * 119.99882 * 0.25287 * 21 20 19 26 26 C 1.38234 * 119.99608 * 359.49427 * 25 21 20 27 27 C 1.53774 * 87.17400 * 25.38777 * 12 11 9 28 28 H 1.08998 * 109.47638 * 300.00260 * 1 2 3 29 29 H 1.09010 * 109.46908 * 60.00191 * 1 2 3 30 30 H 1.08997 * 109.47442 * 179.97438 * 1 2 3 31 31 H 1.08990 * 109.47425 * 180.02562 * 3 2 1 32 32 H 1.09004 * 109.47312 * 299.99896 * 3 2 1 33 33 H 1.09005 * 109.47058 * 59.99680 * 3 2 1 34 34 H 1.09005 * 109.46723 * 300.00580 * 4 2 1 35 35 H 1.09004 * 109.47179 * 59.99479 * 4 2 1 36 36 H 1.08990 * 109.47684 * 179.97438 * 4 2 1 37 37 H 0.97000 * 120.00495 * 359.97438 * 8 6 5 38 38 H 1.09000 * 113.61416 * 334.57104 * 11 9 8 39 39 H 1.09006 * 113.61517 * 203.66490 * 11 9 8 40 40 H 0.96993 * 120.00055 * 336.52810 * 14 12 11 41 41 H 1.09002 * 109.47350 * 59.99796 * 17 15 14 42 42 H 1.09009 * 109.46937 * 299.99867 * 17 15 14 43 43 H 1.08001 * 120.00057 * 359.97438 * 19 18 17 44 44 H 1.08001 * 119.99706 * 179.97438 * 20 19 18 45 45 H 1.08999 * 109.47358 * 59.99636 * 22 21 20 46 46 H 0.96700 * 114.00311 * 300.00591 * 23 22 21 47 47 H 1.48497 * 110.00233 * 179.97438 * 24 22 21 48 48 H 1.48492 * 109.99800 * 301.31995 * 24 22 21 49 49 H 1.07996 * 119.99447 * 179.72715 * 25 21 20 50 50 H 1.08003 * 119.99541 * 180.25019 * 26 25 21 51 51 H 1.09000 * 113.61515 * 89.15866 * 27 12 11 52 52 H 1.08997 * 113.61721 * 220.06069 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9516 -2.5097 0.5035 8 7 2.0672 -2.6654 2.4171 9 6 1.6731 -4.0666 2.5836 10 1 1.4208 -4.5503 1.6399 11 6 2.6460 -4.8810 3.4525 12 6 1.8051 -4.4451 4.6640 13 1 2.1354 -3.5068 5.1097 14 7 1.6078 -5.5068 5.6539 15 6 1.3280 -5.1911 6.9340 16 8 1.2401 -4.0281 7.2665 17 6 1.1255 -6.2833 7.9525 18 6 0.8271 -5.6686 9.2957 19 6 -0.4799 -5.4044 9.6599 20 6 -0.7536 -4.8411 10.8923 21 6 0.2798 -4.5414 11.7601 22 6 -0.0186 -3.9268 13.1033 23 8 -0.6866 -2.6772 12.9175 24 14 1.5754 -3.6481 14.0266 25 6 1.5873 -4.8003 11.3935 26 6 1.8606 -5.3684 10.1633 27 6 0.6256 -4.2832 3.6908 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5139 -0.8901 30 1 -0.3634 -1.0276 -0.0005 31 1 3.1299 1.4425 -0.0005 32 1 1.6767 1.9564 -0.8900 33 1 1.6766 1.9564 0.8900 34 1 1.6766 -1.7489 -1.2493 35 1 1.6767 -0.2074 -2.1393 36 1 3.1300 -0.7208 -1.2495 37 1 2.6268 -2.2366 3.0833 38 1 3.6612 -4.4844 3.4602 39 1 2.6107 -5.9533 3.2597 40 1 1.6784 -6.4370 5.3882 41 1 2.0300 -6.8876 8.0219 42 1 0.2899 -6.9136 7.6480 43 1 -1.2873 -5.6382 8.9817 44 1 -1.7748 -4.6344 11.1766 45 1 -0.6574 -4.5986 13.6765 46 1 -0.1753 -2.0289 12.4142 47 1 1.2949 -3.0417 15.3528 48 1 2.2946 -4.9358 14.1983 49 1 2.3949 -4.5620 12.0698 50 1 2.8818 -5.5744 9.8785 51 1 0.0369 -5.1916 3.5632 52 1 0.0121 -3.4047 3.8907 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_12335836.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:20:50 Heat of formation + Delta-G solvation = -97.033905 kcal Electronic energy + Delta-G solvation = -32035.894279 eV Core-core repulsion = 27581.864850 eV Total energy + Delta-G solvation = -4454.029429 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.192 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.94038 -41.28833 -40.55414 -39.54851 -37.82436 -37.52980 -35.44057 -34.83886 -34.06877 -33.13869 -31.91261 -29.80940 -28.31250 -28.27461 -26.96398 -26.42604 -25.20874 -23.78706 -23.54798 -22.26094 -21.43740 -21.03357 -20.68425 -19.23893 -18.41688 -18.10126 -17.82844 -17.40690 -17.06002 -16.93836 -16.68129 -16.46813 -16.26374 -15.95732 -15.64492 -15.45197 -15.34479 -15.07550 -14.85753 -14.63577 -14.47034 -14.32695 -14.04386 -13.96743 -13.74069 -13.49956 -13.35636 -13.20821 -13.09914 -13.06077 -12.84098 -12.81288 -12.79219 -12.43981 -12.24541 -12.20034 -12.02019 -11.92099 -11.75634 -11.64959 -11.28755 -10.97291 -10.91032 -10.39277 -10.29173 -10.05593 -9.83622 -9.57953 -4.99586 0.26733 0.49522 1.14595 1.33406 1.59809 1.65231 1.86433 1.99046 2.08501 2.80434 3.07656 3.19209 3.34782 3.48645 3.57802 3.69326 3.76348 3.78984 3.83347 3.84919 3.87366 3.92884 3.98541 4.04209 4.23440 4.35619 4.38290 4.46099 4.48271 4.48799 4.54939 4.58066 4.64588 4.66358 4.71069 4.72139 4.79763 4.83967 4.89218 4.92564 4.94596 5.01288 5.09682 5.10340 5.25593 5.37719 5.39330 5.41369 5.49103 5.57607 5.60505 5.60852 6.02666 6.37633 6.41237 6.62151 7.18555 7.41503 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.141 3.859 10 H 0.115 0.885 11 C -0.152 4.152 12 C 0.123 3.877 13 H 0.115 0.885 14 N -0.724 5.724 15 C 0.515 3.485 16 O -0.525 6.525 17 C -0.104 4.104 18 C -0.064 4.064 19 C -0.103 4.103 20 C -0.091 4.091 21 C -0.119 4.119 22 C -0.068 4.068 23 O -0.541 6.541 24 Si 0.688 3.312 25 C -0.116 4.116 26 C -0.100 4.100 27 C -0.165 4.165 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.408 0.592 38 H 0.085 0.915 39 H 0.105 0.895 40 H 0.403 0.597 41 H 0.105 0.895 42 H 0.105 0.895 43 H 0.122 0.878 44 H 0.126 0.874 45 H 0.113 0.887 46 H 0.380 0.620 47 H -0.255 1.255 48 H -0.258 1.258 49 H 0.126 0.874 50 H 0.124 0.876 51 H 0.098 0.902 52 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.748 -2.462 -2.380 5.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.036 3.964 10 H 0.133 0.867 11 C -0.191 4.191 12 C 0.018 3.982 13 H 0.133 0.867 14 N -0.375 5.375 15 C 0.302 3.698 16 O -0.400 6.400 17 C -0.144 4.144 18 C -0.065 4.065 19 C -0.121 4.121 20 C -0.109 4.109 21 C -0.119 4.119 22 C -0.179 4.179 23 O -0.346 6.346 24 Si 0.590 3.410 25 C -0.133 4.133 26 C -0.118 4.118 27 C -0.205 4.205 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.243 0.757 38 H 0.104 0.896 39 H 0.124 0.876 40 H 0.237 0.763 41 H 0.123 0.877 42 H 0.123 0.877 43 H 0.140 0.860 44 H 0.144 0.856 45 H 0.130 0.870 46 H 0.227 0.773 47 H -0.180 1.180 48 H -0.183 1.183 49 H 0.143 0.857 50 H 0.142 0.858 51 H 0.116 0.884 52 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 3.342 -2.279 -1.539 4.328 hybrid contribution -0.261 -0.680 -0.100 0.736 sum 3.081 -2.959 -1.639 4.576 Atomic orbital electron populations 1.22523 0.93812 1.05056 1.02758 1.22132 0.94475 0.91573 0.81796 1.21881 1.02341 0.92328 1.03377 1.22524 1.01608 1.03436 0.96546 1.86312 1.71443 1.23304 1.46785 1.18044 0.78590 0.80678 0.81928 1.90919 1.40777 1.70377 1.43227 1.44361 1.55525 1.11767 1.23826 1.21631 0.95547 0.79650 0.99580 0.86722 1.23774 0.99427 1.01559 0.94317 1.22613 0.96244 0.92579 0.86793 0.86696 1.45983 1.72963 1.09909 1.08691 1.20613 0.76016 0.90518 0.82695 1.90757 1.49173 1.20465 1.79616 1.20704 1.04942 0.97146 0.91623 1.19262 0.93649 0.99385 0.94157 1.21015 0.95931 0.98732 0.96472 1.20957 0.99194 0.97322 0.93414 1.20330 0.93643 1.00812 0.97128 1.25049 1.07869 0.87339 0.97671 1.86490 1.46922 1.23177 1.78028 0.94621 0.79382 0.85668 0.81301 1.20939 0.95467 0.99989 0.96906 1.20901 0.98720 0.98580 0.93571 1.24028 0.97608 1.03635 0.95243 0.92076 0.90910 0.89433 0.91378 0.89912 0.91352 0.89432 0.90913 0.92102 0.75720 0.89646 0.87641 0.76280 0.87658 0.87712 0.86024 0.85629 0.86990 0.77278 1.18008 1.18325 0.85663 0.85806 0.88362 0.90265 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.27 8.37 37.15 0.31 0.04 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.08 16 3 C -0.14 0.09 8.85 37.16 0.33 0.41 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.36 -0.89 9.94 -40.31 -0.40 -1.29 16 6 C 0.65 1.73 8.06 54.05 0.44 2.17 16 7 O -0.56 -2.73 11.48 -19.28 -0.22 -2.95 16 8 N -0.70 0.23 5.26 -57.84 -0.30 -0.08 16 9 C 0.14 -0.23 4.33 -67.03 -0.29 -0.52 16 10 H 0.11 -0.07 7.46 -51.93 -0.39 -0.45 16 11 C -0.15 0.60 7.58 -25.92 -0.20 0.40 16 12 C 0.12 -0.27 4.09 -67.12 -0.27 -0.54 16 13 H 0.12 -0.05 7.50 -51.93 -0.39 -0.44 16 14 N -0.72 2.02 5.36 -53.02 -0.28 1.74 16 15 C 0.52 -0.03 7.82 -10.99 -0.09 -0.11 16 16 O -0.53 -2.34 15.65 5.56 0.09 -2.26 16 17 C -0.10 0.24 5.83 -29.03 -0.17 0.07 16 18 C -0.06 -0.04 4.37 -104.62 -0.46 -0.49 16 19 C -0.10 -0.12 9.70 -39.58 -0.38 -0.51 16 20 C -0.09 -0.16 9.61 -39.58 -0.38 -0.54 16 21 C -0.12 -0.16 5.39 -104.62 -0.56 -0.72 16 22 C -0.07 -0.05 2.82 36.00 0.10 0.05 16 23 O -0.54 -0.78 12.77 -35.23 -0.45 -1.23 16 24 Si 0.69 -0.15 29.79 -169.99 -5.06 -5.22 16 25 C -0.12 -0.08 8.67 -39.58 -0.34 -0.42 16 26 C -0.10 -0.06 9.70 -39.58 -0.38 -0.44 16 27 C -0.16 0.26 7.69 -25.83 -0.20 0.06 16 28 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 29 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 30 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.41 -0.79 8.81 -40.82 -0.36 -1.15 16 38 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 39 H 0.11 -0.58 8.11 -51.93 -0.42 -1.00 16 40 H 0.40 -2.29 8.71 -40.82 -0.36 -2.65 16 41 H 0.11 -0.47 8.09 -51.93 -0.42 -0.89 16 42 H 0.10 -0.43 8.09 -51.92 -0.42 -0.85 16 43 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 44 H 0.13 0.16 8.06 -52.49 -0.42 -0.26 16 45 H 0.11 0.11 7.96 -51.93 -0.41 -0.30 16 46 H 0.38 -0.78 8.70 45.56 0.40 -0.38 16 47 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 48 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 49 H 0.13 -0.14 4.88 -52.49 -0.26 -0.40 16 50 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 51 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 52 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 LS Contribution 422.53 15.07 6.37 6.37 Total: 0.00 -10.02 422.53 -10.94 -20.97 By element: Atomic # 1 Polarization: -6.79 SS G_CDS: -8.33 Total: -15.12 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -2.34 Total: -0.93 kcal Atomic # 7 Polarization: 2.25 SS G_CDS: -0.59 Total: 1.66 kcal Atomic # 8 Polarization: -6.75 SS G_CDS: -0.98 Total: -7.74 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.06 Total: -5.22 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -10.02 -10.94 -20.97 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_12335836.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.068 kcal (2) G-P(sol) polarization free energy of solvation -10.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.090 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.944 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.966 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds