Wall clock time and date at job start Sun Mar 7 2021 00:21:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53000 * 109.47007 * 2 1 4 4 C 1.52997 * 109.47314 * 239.99883 * 2 1 3 5 5 O 1.45201 * 109.47346 * 120.00147 * 2 1 3 6 6 C 1.34638 * 116.99819 * 59.99666 * 5 2 1 7 7 O 1.21513 * 120.00208 * 0.02562 * 6 5 2 8 8 N 1.34777 * 119.99834 * 179.72501 * 6 5 2 9 9 C 1.46499 * 120.00199 * 180.27541 * 8 6 5 10 10 H 1.08998 * 112.84467 * 23.80487 * 9 8 6 11 11 C 1.53781 * 113.61433 * 155.00089 * 9 8 6 12 12 C 1.53785 * 87.07861 * 139.98479 * 11 9 8 13 13 H 1.08998 * 113.61517 * 219.93252 * 12 11 9 14 14 N 1.46499 * 113.61460 * 89.11510 * 12 11 9 15 15 C 1.34782 * 120.00133 * 154.99601 * 14 12 11 16 16 O 1.21698 * 119.99597 * 0.02562 * 15 14 12 17 17 C 1.46420 * 120.00286 * 180.02562 * 15 14 12 18 18 C 1.34811 * 120.00192 * 180.02562 * 17 15 14 19 19 C 1.47206 * 119.99945 * 180.02562 * 18 17 15 20 20 C 1.39838 * 120.17263 * 359.71962 * 19 18 17 21 21 C 1.37885 * 119.82717 * 179.81191 * 20 19 18 22 22 C 1.38408 * 120.17125 * 0.44436 * 21 20 19 23 23 C 1.50699 * 119.82627 * 179.76376 * 22 21 20 24 24 O 1.42899 * 109.46799 * 120.02530 * 23 22 21 25 25 Si 1.86300 * 109.47362 * 0.02562 * 23 22 21 26 26 C 1.38397 * 120.34300 * 359.79089 * 22 21 20 27 27 C 1.37898 * 120.17495 * 359.97438 * 26 22 21 28 28 C 1.53780 * 87.08273 * 334.56699 * 12 11 9 29 29 H 1.08997 * 109.47392 * 299.99655 * 1 2 3 30 30 H 1.08999 * 109.47056 * 59.99890 * 1 2 3 31 31 H 1.08999 * 109.47175 * 179.97438 * 1 2 3 32 32 H 1.08997 * 109.47042 * 180.02562 * 3 2 1 33 33 H 1.08999 * 109.47303 * 299.99959 * 3 2 1 34 34 H 1.09003 * 109.46990 * 60.00348 * 3 2 1 35 35 H 1.08999 * 109.47400 * 300.00352 * 4 2 1 36 36 H 1.09013 * 109.46945 * 59.99983 * 4 2 1 37 37 H 1.08997 * 109.47343 * 179.97438 * 4 2 1 38 38 H 0.97001 * 119.99727 * 0.28438 * 8 6 5 39 39 H 1.08996 * 113.61616 * 254.52774 * 11 9 8 40 40 H 1.08991 * 113.61275 * 25.43561 * 11 9 8 41 41 H 0.97003 * 120.00350 * 335.00420 * 14 12 11 42 42 H 1.08000 * 120.00020 * 0.02562 * 17 15 14 43 43 H 1.08000 * 119.99788 * 359.97438 * 18 17 15 44 44 H 1.07996 * 120.08199 * 0.02562 * 20 19 18 45 45 H 1.07994 * 119.91800 * 180.21071 * 21 20 19 46 46 H 1.09006 * 109.46703 * 240.02354 * 23 22 21 47 47 H 0.96706 * 113.99770 * 179.97438 * 24 23 22 48 48 H 1.48497 * 110.00222 * 298.68491 * 25 23 22 49 49 H 1.48501 * 109.99505 * 60.00154 * 25 23 22 50 50 H 1.08001 * 119.91397 * 179.97438 * 26 22 21 51 51 H 1.07997 * 120.09051 * 179.97438 * 27 26 22 52 52 H 1.08993 * 113.61656 * 270.88591 * 28 12 11 53 53 H 1.09004 * 113.61428 * 139.97892 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9515 -2.5097 0.5035 8 7 2.0722 -2.6672 2.4140 9 6 1.6835 -4.0703 2.5772 10 1 1.4308 -4.5520 1.6327 11 6 2.6614 -4.8838 3.4414 12 6 1.4274 -5.5627 4.0590 13 1 1.5104 -5.7251 5.1337 14 7 0.9921 -6.7595 3.3349 15 6 0.2970 -7.7197 3.9763 16 8 0.0307 -7.5923 5.1570 17 6 -0.1376 -8.9162 3.2528 18 6 -0.8333 -9.8764 3.8942 19 6 -1.2698 -11.0794 3.1669 20 6 -0.9698 -11.2273 1.8091 21 6 -1.3788 -12.3589 1.1357 22 6 -2.0923 -13.3427 1.7979 23 6 -2.5401 -14.5739 1.0530 24 8 -1.9693 -15.7334 1.6628 25 14 -1.9793 -14.4651 -0.7203 26 6 -2.3973 -13.2014 3.1404 27 6 -1.9912 -12.0778 3.8289 28 6 0.6404 -4.2958 3.6845 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1299 1.4425 -0.0005 33 1 1.6766 1.9564 -0.8900 34 1 1.6766 1.9563 0.8900 35 1 1.6767 -1.7489 -1.2493 36 1 1.6766 -0.2074 -2.1393 37 1 3.1300 -0.7209 -1.2494 38 1 2.6318 -2.2383 3.0802 39 1 3.2912 -5.5627 2.8666 40 1 3.2265 -4.2778 4.1494 41 1 1.2041 -6.8610 2.3938 42 1 0.0991 -9.0294 2.2051 43 1 -1.0696 -9.7633 4.9420 44 1 -0.4163 -10.4588 1.2901 45 1 -1.1450 -12.4762 0.0879 46 1 -3.6274 -14.6435 1.0867 47 1 -2.2157 -16.5646 1.2345 48 1 -2.5911 -13.2809 -1.3748 49 1 -0.4985 -14.3697 -0.7796 50 1 -2.9548 -13.9733 3.6502 51 1 -2.2302 -11.9688 4.8765 52 1 0.6531 -3.5290 4.4589 53 1 -0.3611 -4.4999 3.3057 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_12360594.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:21:30 Heat of formation + Delta-G solvation = -76.823197 kcal Electronic energy + Delta-G solvation = -32696.934817 eV Core-core repulsion = 28115.555649 eV Total energy + Delta-G solvation = -4581.379167 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.192 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.00719 -41.30530 -40.68033 -39.70971 -37.99573 -37.71963 -35.62433 -35.23572 -34.85972 -33.35037 -32.35771 -31.35599 -28.40514 -28.33556 -27.47991 -26.84428 -26.03576 -24.27912 -24.00845 -23.12014 -22.21047 -21.29249 -20.74970 -20.40057 -19.20610 -18.85368 -18.38227 -17.91435 -17.47115 -17.23729 -17.21226 -16.69369 -16.64509 -16.25827 -15.98420 -15.83490 -15.51906 -15.40537 -15.24646 -15.09573 -14.68170 -14.53447 -14.38823 -14.10189 -13.90530 -13.85892 -13.63831 -13.59631 -13.39355 -13.19010 -13.15773 -13.05007 -12.94613 -12.90127 -12.58252 -12.40950 -12.33683 -12.08835 -12.00534 -11.95568 -11.71172 -11.44018 -11.43030 -11.20476 -11.13614 -10.34540 -10.29792 -10.14474 -10.11664 -9.34546 -4.95373 -0.67081 0.22432 0.76824 1.13725 1.28614 1.62737 1.68828 1.94720 2.03652 2.12247 2.66656 3.10648 3.30213 3.34215 3.43068 3.46396 3.61610 3.70652 3.72418 3.75522 3.79158 3.87360 3.90969 3.92587 4.05918 4.09833 4.20107 4.30569 4.39611 4.47146 4.52090 4.57587 4.62111 4.66376 4.69438 4.72994 4.73417 4.79846 4.81115 4.84263 4.84424 4.90346 4.92240 4.96490 5.03022 5.08453 5.22032 5.23340 5.25247 5.31955 5.33968 5.46616 5.50785 5.56026 5.75262 6.35291 6.42750 6.88140 7.11162 7.29696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.369 6.369 6 C 0.643 3.357 7 O -0.595 6.595 8 N -0.689 5.689 9 C 0.139 3.861 10 H 0.109 0.891 11 C -0.130 4.130 12 C 0.119 3.881 13 H 0.100 0.900 14 N -0.698 5.698 15 C 0.548 3.452 16 O -0.585 6.585 17 C -0.212 4.212 18 C -0.016 4.016 19 C -0.083 4.083 20 C -0.097 4.097 21 C -0.145 4.145 22 C -0.081 4.081 23 C -0.082 4.082 24 O -0.564 6.564 25 Si 0.773 3.227 26 C -0.102 4.102 27 C -0.096 4.096 28 C -0.163 4.163 29 H 0.060 0.940 30 H 0.086 0.914 31 H 0.063 0.937 32 H 0.070 0.930 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.063 0.937 38 H 0.419 0.581 39 H 0.097 0.903 40 H 0.124 0.876 41 H 0.416 0.584 42 H 0.157 0.843 43 H 0.131 0.869 44 H 0.152 0.848 45 H 0.121 0.879 46 H 0.096 0.904 47 H 0.404 0.596 48 H -0.287 1.287 49 H -0.297 1.297 50 H 0.142 0.858 51 H 0.148 0.852 52 H 0.104 0.896 53 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.095 -1.390 -3.553 3.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.396 3.604 7 O -0.486 6.486 8 N -0.348 5.348 9 C 0.035 3.965 10 H 0.127 0.873 11 C -0.169 4.169 12 C 0.013 3.987 13 H 0.118 0.882 14 N -0.349 5.349 15 C 0.339 3.661 16 O -0.467 6.467 17 C -0.232 4.232 18 C -0.036 4.036 19 C -0.083 4.083 20 C -0.115 4.115 21 C -0.163 4.163 22 C -0.081 4.081 23 C -0.192 4.192 24 O -0.374 6.374 25 Si 0.679 3.321 26 C -0.120 4.120 27 C -0.114 4.114 28 C -0.203 4.203 29 H 0.079 0.921 30 H 0.105 0.895 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.082 0.918 38 H 0.256 0.744 39 H 0.116 0.884 40 H 0.142 0.858 41 H 0.254 0.746 42 H 0.174 0.826 43 H 0.149 0.851 44 H 0.169 0.831 45 H 0.139 0.861 46 H 0.114 0.886 47 H 0.256 0.744 48 H -0.215 1.215 49 H -0.225 1.225 50 H 0.160 0.840 51 H 0.166 0.834 52 H 0.123 0.877 53 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 1.250 -0.549 -3.415 3.678 hybrid contribution 0.001 0.475 0.307 0.565 sum 1.251 -0.074 -3.109 3.352 Atomic orbital electron populations 1.22472 0.94175 1.03635 1.03462 1.22347 0.94353 0.92624 0.81582 1.21893 1.02508 0.90885 1.04217 1.22470 1.01682 1.02242 0.97272 1.86317 1.71462 1.23364 1.47259 1.18445 0.78616 0.80802 0.82503 1.90900 1.42264 1.70958 1.44429 1.44741 1.54859 1.11970 1.23234 1.22684 0.96272 0.78796 0.98743 0.87324 1.23720 0.95948 0.98214 0.99019 1.21646 0.95629 0.83618 0.97810 0.88151 1.45501 1.55771 1.19100 1.14539 1.18616 0.77365 0.83794 0.86348 1.90816 1.57743 1.80409 1.17716 1.22994 1.04053 0.94257 1.01932 1.22368 0.91300 0.90364 0.99578 1.19128 1.00305 0.95064 0.93788 1.21557 0.98673 0.97604 0.93627 1.20980 1.00038 0.95670 0.99595 1.19941 0.97710 0.95116 0.95299 1.24868 1.01685 0.85314 1.07330 1.86438 1.74527 1.16741 1.59652 0.94329 0.77185 0.85614 0.74965 1.21167 0.99657 0.97758 0.93424 1.21737 0.95893 0.92709 1.01042 1.23999 0.98892 0.98157 0.99264 0.92064 0.89484 0.91841 0.91086 0.88348 0.91241 0.91728 0.89528 0.91838 0.74365 0.88403 0.85811 0.74643 0.82600 0.85103 0.83084 0.86137 0.88577 0.74439 1.21463 1.22472 0.84003 0.83410 0.87728 0.92078 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.62 8.37 71.98 0.60 -0.02 16 2 C 0.13 0.35 1.13 -10.80 -0.01 0.34 16 3 C -0.14 0.30 8.85 71.98 0.64 0.94 16 4 C -0.18 -0.50 8.37 71.98 0.60 0.10 16 5 O -0.37 -1.87 9.94 -55.48 -0.55 -2.42 16 6 C 0.64 3.84 8.06 129.79 1.05 4.89 16 7 O -0.59 -6.70 11.48 19.80 0.23 -6.47 16 8 N -0.69 0.61 5.36 -567.60 -3.04 -2.43 16 9 C 0.14 -0.35 4.12 45.52 0.19 -0.16 16 10 H 0.11 -0.01 7.46 -2.39 -0.02 -0.03 16 11 C -0.13 0.92 7.58 31.12 0.24 1.16 16 12 C 0.12 -0.21 4.32 45.52 0.20 -0.01 16 13 H 0.10 0.17 7.46 -2.39 -0.02 0.15 16 14 N -0.70 0.81 5.26 -444.25 -2.34 -1.52 16 15 C 0.55 2.75 7.74 86.37 0.67 3.42 16 16 O -0.58 -7.94 15.83 -4.34 -0.07 -8.00 16 17 C -0.21 -0.22 9.41 23.61 0.22 0.00 16 18 C -0.02 -0.05 9.46 23.84 0.23 0.18 16 19 C -0.08 -0.27 5.87 -20.15 -0.12 -0.39 16 20 C -0.10 -0.25 9.41 22.57 0.21 -0.03 16 21 C -0.15 -0.65 8.65 22.23 0.19 -0.46 16 22 C -0.08 -0.34 5.43 -19.79 -0.11 -0.45 16 23 C -0.08 0.08 2.81 71.24 0.20 0.28 16 24 O -0.56 0.43 12.74 -148.98 -1.90 -1.47 16 25 Si 0.77 -1.88 29.77 68.60 2.04 0.16 16 26 C -0.10 -0.35 9.59 22.23 0.21 -0.14 16 27 C -0.10 -0.27 9.80 22.58 0.22 -0.05 16 28 C -0.16 0.15 7.68 31.12 0.24 0.39 16 29 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 30 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 31 H 0.06 0.56 5.88 -2.39 -0.01 0.54 16 32 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 33 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 34 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 35 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 36 H 0.09 -0.04 8.14 -2.38 -0.02 -0.06 16 37 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 38 H 0.42 -2.37 8.84 -92.71 -0.82 -3.19 16 39 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 40 H 0.12 -1.27 8.12 -2.39 -0.02 -1.29 16 41 H 0.42 -2.71 8.68 -92.71 -0.80 -3.52 16 42 H 0.16 -0.78 6.07 -2.91 -0.02 -0.80 16 43 H 0.13 0.59 7.52 -2.91 -0.02 0.57 16 44 H 0.15 -0.42 6.17 -2.91 -0.02 -0.44 16 45 H 0.12 0.42 4.85 -2.91 -0.01 0.40 16 46 H 0.10 -0.48 7.96 -2.38 -0.02 -0.50 16 47 H 0.40 -4.56 8.74 -74.05 -0.65 -5.21 16 48 H -0.29 -0.80 7.11 99.48 0.71 -0.10 16 49 H -0.30 -1.53 7.11 99.48 0.71 -0.83 16 50 H 0.14 0.10 8.06 -2.91 -0.02 0.08 16 51 H 0.15 -0.15 8.06 -2.91 -0.02 -0.17 16 52 H 0.10 -0.23 8.14 -2.39 -0.02 -0.25 16 53 H 0.06 0.19 8.14 -2.39 -0.02 0.18 16 Total: 0.00 -26.44 432.41 -1.23 -27.68 By element: Atomic # 1 Polarization: -14.23 SS G_CDS: -1.27 Total: -15.50 kcal Atomic # 6 Polarization: 4.33 SS G_CDS: 5.66 Total: 10.00 kcal Atomic # 7 Polarization: 1.42 SS G_CDS: -5.38 Total: -3.96 kcal Atomic # 8 Polarization: -16.08 SS G_CDS: -2.29 Total: -18.37 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: 2.04 Total: 0.16 kcal Total: -26.44 -1.23 -27.68 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_12360594.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.147 kcal (2) G-P(sol) polarization free energy of solvation -26.442 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.589 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.676 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds