Wall clock time and date at job start Sun Mar 7 2021 00:21:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53007 * 109.47248 * 2 1 4 4 C 1.52999 * 109.47116 * 240.00201 * 2 1 3 5 5 O 1.45203 * 109.47352 * 120.00213 * 2 1 3 6 6 C 1.34625 * 116.99763 * 60.00147 * 5 2 1 7 7 O 1.21513 * 120.00672 * 359.97438 * 6 5 2 8 8 N 1.34786 * 119.99802 * 180.02562 * 6 5 2 9 9 C 1.46497 * 120.00059 * 179.97438 * 8 6 5 10 10 H 1.09007 * 112.90933 * 336.25269 * 9 8 6 11 11 C 1.53780 * 113.61379 * 107.50331 * 9 8 6 12 12 C 1.53785 * 87.07908 * 139.98382 * 11 9 8 13 13 H 1.09007 * 113.68560 * 220.00653 * 12 11 9 14 14 N 1.46498 * 113.61515 * 89.12122 * 12 11 9 15 15 C 1.34771 * 120.00250 * 107.50215 * 14 12 11 16 16 O 1.21567 * 120.00178 * 359.97438 * 15 14 12 17 17 C 1.47730 * 119.99759 * 179.97438 * 15 14 12 18 18 C 1.39634 * 120.11569 * 179.97438 * 17 15 14 19 19 C 1.37850 * 119.87964 * 179.97438 * 18 17 15 20 20 C 1.50698 * 119.94263 * 180.02562 * 19 18 17 21 21 O 1.42895 * 109.47285 * 15.02111 * 20 19 18 22 22 Si 1.86308 * 109.47344 * 135.02120 * 20 19 18 23 23 C 1.38635 * 120.11813 * 0.02590 * 19 18 17 24 24 F 1.35100 * 119.88184 * 179.70211 * 23 19 18 25 25 C 1.38672 * 120.23906 * 359.97438 * 23 19 18 26 26 C 1.37816 * 120.12044 * 0.02562 * 25 23 19 27 27 C 1.53778 * 87.08148 * 334.56720 * 12 11 9 28 28 H 1.09000 * 109.47307 * 300.00038 * 1 2 3 29 29 H 1.09005 * 109.47244 * 59.99763 * 1 2 3 30 30 H 1.09006 * 109.47298 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47535 * 179.97438 * 3 2 1 32 32 H 1.09002 * 109.46685 * 300.00201 * 3 2 1 33 33 H 1.09000 * 109.46997 * 59.99772 * 3 2 1 34 34 H 1.08995 * 109.47602 * 299.99748 * 4 2 1 35 35 H 1.09005 * 109.47034 * 59.99908 * 4 2 1 36 36 H 1.09007 * 109.47331 * 179.97438 * 4 2 1 37 37 H 0.96999 * 119.99860 * 359.97438 * 8 6 5 38 38 H 1.08994 * 113.61381 * 25.42951 * 11 9 8 39 39 H 1.09001 * 113.60932 * 254.52808 * 11 9 8 40 40 H 0.97003 * 119.99215 * 287.49310 * 14 12 11 41 41 H 1.08001 * 120.06266 * 359.96488 * 18 17 15 42 42 H 1.09003 * 109.46895 * 255.02178 * 20 19 18 43 43 H 0.96707 * 113.99940 * 59.99600 * 21 20 19 44 44 H 1.48501 * 109.99954 * 179.97438 * 22 20 19 45 45 H 1.48497 * 109.99905 * 301.31967 * 22 20 19 46 46 H 1.08001 * 119.93898 * 180.02562 * 25 23 19 47 47 H 1.08003 * 120.06186 * 180.02562 * 26 25 23 48 48 H 1.08992 * 113.61624 * 139.98793 * 27 12 11 49 49 H 1.09009 * 113.61430 * 270.80523 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9509 -2.5095 0.5039 8 7 2.0673 -2.6655 2.4171 9 6 1.6733 -4.0666 2.5835 10 1 0.7595 -4.3173 2.0447 11 6 2.8213 -5.0617 2.3458 12 6 2.2723 -5.8595 3.5404 13 1 3.0481 -6.2651 4.1899 14 7 1.2644 -6.8552 3.1678 15 6 1.5713 -8.1672 3.1943 16 8 2.6846 -8.5245 3.5269 17 6 0.5546 -9.1712 2.8190 18 6 0.8701 -10.5312 2.8450 19 6 -0.0825 -11.4640 2.4944 20 6 0.2563 -12.9321 2.5226 21 8 1.4645 -13.1282 3.2599 22 14 -1.1289 -13.8736 3.3386 23 6 -1.3515 -11.0538 2.1160 24 9 -2.2796 -11.9717 1.7675 25 6 -1.6701 -9.7045 2.0884 26 6 -0.7254 -8.7635 2.4369 27 6 1.6737 -4.5369 4.0477 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.6766 1.9564 0.8900 34 1 1.6767 -1.7488 -1.2494 35 1 1.6766 -0.2073 -2.1393 36 1 3.1300 -0.7208 -1.2495 37 1 2.6269 -2.2366 3.0833 38 1 3.8100 -4.6378 2.5211 39 1 2.7495 -5.5924 1.3964 40 1 0.3761 -6.5700 2.9021 41 1 1.8586 -10.8518 3.1392 42 1 0.3901 -13.2937 1.5030 43 1 1.4179 -12.8284 4.1782 44 1 -0.8073 -15.3229 3.3720 45 1 -1.3426 -13.3682 4.7185 46 1 -2.6604 -9.3904 1.7932 47 1 -0.9746 -7.7129 2.4155 48 1 0.6756 -4.6438 4.4723 49 1 2.3482 -3.9700 4.6895 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_12496548.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:21:40 Heat of formation + Delta-G solvation = -134.421746 kcal Electronic energy + Delta-G solvation = -32912.921656 eV Core-core repulsion = 28143.354612 eV Total energy + Delta-G solvation = -4769.567044 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.167 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -50.28423 -42.01534 -41.54361 -40.42787 -39.35008 -37.95747 -37.79972 -35.61404 -34.91772 -33.63667 -32.54376 -31.78944 -28.37037 -28.30760 -27.27049 -26.81029 -26.31793 -24.80515 -23.27794 -23.14064 -21.85847 -21.19624 -20.62935 -19.45505 -19.11167 -18.66870 -18.04197 -17.87288 -17.71704 -17.18563 -17.06677 -17.00822 -16.53576 -16.22578 -16.05042 -15.87797 -15.74066 -15.43795 -15.31816 -15.15318 -14.64081 -14.48915 -14.35682 -14.23292 -13.96144 -13.93659 -13.59354 -13.37874 -13.35125 -13.15969 -13.12751 -12.91415 -12.86929 -12.86369 -12.54688 -12.48225 -12.30349 -11.98445 -11.96966 -11.67417 -11.39462 -11.30036 -11.11745 -11.02871 -10.33644 -10.14602 -10.03246 -9.75388 -4.85183 -0.51663 0.00842 1.15606 1.17799 1.49415 1.57552 1.73238 1.84551 1.93302 2.56044 2.94524 3.13889 3.15131 3.30868 3.33480 3.46419 3.56537 3.66423 3.73761 3.78642 3.82334 3.93683 3.94130 3.99561 4.10262 4.40281 4.42252 4.54800 4.55526 4.60876 4.65570 4.70341 4.76160 4.76398 4.79206 4.81945 4.84946 4.87190 4.88871 4.92832 4.96190 5.01454 5.07776 5.11158 5.24260 5.26668 5.34203 5.50236 5.59319 5.61374 6.32378 6.35689 6.40305 7.04923 7.33655 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.128 3.872 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.643 3.357 7 O -0.593 6.593 8 N -0.689 5.689 9 C 0.139 3.861 10 H 0.113 0.887 11 C -0.165 4.165 12 C 0.120 3.880 13 H 0.101 0.899 14 N -0.695 5.695 15 C 0.563 3.437 16 O -0.574 6.574 17 C -0.154 4.154 18 C -0.038 4.038 19 C -0.163 4.163 20 C -0.079 4.079 21 O -0.545 6.545 22 Si 0.745 3.255 23 C 0.120 3.880 24 F -0.100 7.100 25 C -0.142 4.142 26 C -0.047 4.047 27 C -0.130 4.130 28 H 0.062 0.938 29 H 0.085 0.915 30 H 0.066 0.934 31 H 0.068 0.932 32 H 0.097 0.903 33 H 0.070 0.930 34 H 0.064 0.936 35 H 0.086 0.914 36 H 0.059 0.941 37 H 0.418 0.582 38 H 0.103 0.897 39 H 0.062 0.938 40 H 0.416 0.584 41 H 0.136 0.864 42 H 0.133 0.867 43 H 0.387 0.613 44 H -0.290 1.290 45 H -0.284 1.284 46 H 0.180 0.820 47 H 0.172 0.828 48 H 0.101 0.899 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.925 6.586 0.742 8.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.396 3.604 7 O -0.484 6.484 8 N -0.348 5.348 9 C 0.035 3.965 10 H 0.131 0.869 11 C -0.205 4.205 12 C 0.013 3.987 13 H 0.119 0.881 14 N -0.347 5.347 15 C 0.352 3.648 16 O -0.454 6.454 17 C -0.158 4.158 18 C -0.057 4.057 19 C -0.165 4.165 20 C -0.188 4.188 21 O -0.353 6.353 22 Si 0.648 3.352 23 C 0.100 3.900 24 F -0.079 7.079 25 C -0.161 4.161 26 C -0.066 4.066 27 C -0.169 4.169 28 H 0.081 0.919 29 H 0.104 0.896 30 H 0.085 0.915 31 H 0.087 0.913 32 H 0.116 0.884 33 H 0.089 0.911 34 H 0.083 0.917 35 H 0.104 0.896 36 H 0.078 0.922 37 H 0.256 0.744 38 H 0.121 0.879 39 H 0.080 0.920 40 H 0.254 0.746 41 H 0.154 0.846 42 H 0.151 0.849 43 H 0.237 0.763 44 H -0.217 1.217 45 H -0.210 1.210 46 H 0.197 0.803 47 H 0.190 0.810 48 H 0.120 0.880 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -4.560 5.401 0.599 7.094 hybrid contribution 0.966 0.159 0.636 1.167 sum -3.595 5.560 1.235 6.735 Atomic orbital electron populations 1.22466 0.93830 1.03820 1.03502 1.22335 0.94587 0.92478 0.81469 1.21895 1.02386 0.91029 1.04245 1.22474 1.01517 1.02304 0.97445 1.86314 1.71547 1.23441 1.47186 1.18445 0.78599 0.80685 0.82650 1.90898 1.42307 1.70999 1.44161 1.44745 1.54855 1.12200 1.23045 1.22711 0.98514 0.77088 0.98187 0.86939 1.24013 1.00148 0.97220 0.99096 1.21671 0.91934 0.87951 0.97094 0.88090 1.45471 1.16484 1.04535 1.68217 1.18361 0.86886 0.83074 0.76505 1.90801 1.24081 1.81189 1.49368 1.19944 0.95433 0.93338 1.07048 1.20880 0.99219 0.91061 0.94526 1.20315 0.93579 0.97569 1.05013 1.25069 0.96004 0.94946 1.02784 1.86574 1.34418 1.85712 1.28578 0.94097 0.84337 0.76165 0.80602 1.17803 0.85399 0.87654 0.99153 1.91202 1.64126 1.64239 1.88305 1.21455 1.02974 0.89608 1.02026 1.21521 0.90076 1.01670 0.93303 1.23725 1.04435 0.93608 0.95101 0.91851 0.89615 0.91535 0.91333 0.88406 0.91105 0.91688 0.89558 0.92177 0.74419 0.87861 0.91958 0.74551 0.84648 0.84930 0.76325 1.21702 1.20970 0.80306 0.81050 0.88043 0.85887 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.25 8.37 71.98 0.60 0.36 16 2 C 0.13 0.20 1.13 -10.79 -0.01 0.19 16 3 C -0.14 0.42 8.85 71.98 0.64 1.05 16 4 C -0.18 -0.41 8.37 71.98 0.60 0.19 16 5 O -0.37 -1.37 9.94 -55.35 -0.55 -1.92 16 6 C 0.64 2.67 8.06 129.79 1.05 3.72 16 7 O -0.59 -5.39 11.48 19.80 0.23 -5.17 16 8 N -0.69 1.95 5.36 -567.60 -3.04 -1.10 16 9 C 0.14 -0.70 4.12 45.52 0.19 -0.51 16 10 H 0.11 -0.38 7.47 -2.38 -0.02 -0.39 16 11 C -0.16 0.50 7.68 31.12 0.24 0.74 16 12 C 0.12 -0.50 4.32 45.52 0.20 -0.30 16 13 H 0.10 -0.05 7.46 -2.38 -0.02 -0.07 16 14 N -0.70 2.77 5.21 -443.02 -2.31 0.47 16 15 C 0.56 1.80 7.77 86.75 0.67 2.47 16 16 O -0.57 -6.99 15.94 -3.93 -0.06 -7.05 16 17 C -0.15 -0.03 5.87 -20.09 -0.12 -0.15 16 18 C -0.04 -0.11 8.78 22.51 0.20 0.08 16 19 C -0.16 -0.14 5.13 -19.86 -0.10 -0.24 16 20 C -0.08 -0.12 2.96 71.24 0.21 0.09 16 21 O -0.54 -2.53 11.64 -148.98 -1.73 -4.27 16 22 Si 0.74 0.93 29.58 68.60 2.03 2.96 16 23 C 0.12 -0.29 6.66 22.47 0.15 -0.14 16 24 F -0.10 0.35 13.72 44.97 0.62 0.96 16 25 C -0.14 0.95 10.01 22.27 0.22 1.17 16 26 C -0.05 0.31 9.54 22.51 0.21 0.53 16 27 C -0.13 1.25 7.58 31.12 0.24 1.48 16 28 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 29 H 0.09 -0.15 8.14 -2.38 -0.02 -0.16 16 30 H 0.07 0.41 5.88 -2.38 -0.01 0.39 16 31 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.10 -0.60 8.14 -2.39 -0.02 -0.61 16 33 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 34 H 0.06 0.48 5.88 -2.39 -0.01 0.46 16 35 H 0.09 -0.08 8.14 -2.38 -0.02 -0.10 16 36 H 0.06 0.12 8.14 -2.38 -0.02 0.11 16 37 H 0.42 -3.06 8.84 -92.71 -0.82 -3.88 16 38 H 0.10 -0.40 8.14 -2.39 -0.02 -0.42 16 39 H 0.06 0.06 8.14 -2.39 -0.02 0.05 16 40 H 0.42 -4.22 6.73 -92.71 -0.62 -4.84 16 41 H 0.14 0.84 6.66 -2.91 -0.02 0.82 16 42 H 0.13 -0.01 7.96 -2.39 -0.02 -0.03 16 43 H 0.39 -0.27 8.43 -74.05 -0.62 -0.90 16 44 H -0.29 -2.28 7.11 99.48 0.71 -1.57 16 45 H -0.28 -1.60 7.11 99.48 0.71 -0.90 16 46 H 0.18 -2.23 8.06 -2.91 -0.02 -2.25 16 47 H 0.17 -2.40 6.40 -2.91 -0.02 -2.42 16 48 H 0.10 -1.19 8.14 -2.39 -0.02 -1.21 16 49 H 0.12 -1.52 8.12 -2.38 -0.02 -1.54 16 Total: 0.00 -23.65 401.60 -0.65 -24.31 By element: Atomic # 1 Polarization: -18.92 SS G_CDS: -1.01 Total: -19.93 kcal Atomic # 6 Polarization: 5.55 SS G_CDS: 5.19 Total: 10.74 kcal Atomic # 7 Polarization: 4.72 SS G_CDS: -5.35 Total: -0.63 kcal Atomic # 8 Polarization: -16.28 SS G_CDS: -2.12 Total: -18.40 kcal Atomic # 9 Polarization: 0.35 SS G_CDS: 0.62 Total: 0.96 kcal Atomic # 14 Polarization: 0.93 SS G_CDS: 2.03 Total: 2.96 kcal Total: -23.65 -0.65 -24.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_12496548.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.117 kcal (2) G-P(sol) polarization free energy of solvation -23.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.771 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.651 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.305 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.422 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds