Wall clock time and date at job start Sun Mar 7 2021 00:22:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52998 * 109.46715 * 2 1 4 4 C 1.52999 * 109.47365 * 240.00235 * 2 1 3 5 5 O 1.45196 * 109.46812 * 119.99743 * 2 1 3 6 6 C 1.34635 * 117.00072 * 60.00803 * 5 2 1 7 7 O 1.21507 * 119.99959 * 359.97438 * 6 5 2 8 8 N 1.34778 * 120.00127 * 179.97438 * 6 5 2 9 9 C 1.46498 * 119.99939 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.84715 * 23.81376 * 9 8 6 11 11 C 1.53783 * 113.61256 * 155.00195 * 9 8 6 12 12 C 1.53785 * 87.07889 * 89.20393 * 11 9 8 13 13 H 1.09001 * 113.61663 * 270.79970 * 12 11 9 14 14 N 1.46505 * 113.61226 * 139.98333 * 12 11 9 15 15 C 1.34771 * 119.99985 * 156.52742 * 14 12 11 16 16 O 1.21519 * 120.00041 * 0.02562 * 15 14 12 17 17 C 1.48165 * 119.99972 * 179.97438 * 15 14 12 18 18 N 1.32717 * 119.72716 * 0.02562 * 17 15 14 19 19 C 1.31520 * 121.64619 * 179.97438 * 18 17 15 20 20 C 1.38559 * 120.90142 * 0.27819 * 19 18 17 21 21 C 1.50701 * 120.31948 * 179.70076 * 20 19 18 22 22 O 1.42905 * 109.46845 * 244.99389 * 21 20 19 23 23 Si 1.86296 * 109.47288 * 4.99471 * 21 20 19 24 24 C 1.38624 * 119.35263 * 359.42621 * 20 19 18 25 25 C 1.38592 * 118.48658 * 0.56067 * 24 20 19 26 26 C 1.53776 * 87.17259 * 25.39003 * 12 11 9 27 27 H 1.08997 * 109.47195 * 299.99543 * 1 2 3 28 28 H 1.09000 * 109.46719 * 60.00200 * 1 2 3 29 29 H 1.09001 * 109.46714 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.46976 * 179.97438 * 3 2 1 31 31 H 1.08994 * 109.47758 * 299.99983 * 3 2 1 32 32 H 1.09004 * 109.47266 * 60.00177 * 3 2 1 33 33 H 1.09005 * 109.47039 * 300.00187 * 4 2 1 34 34 H 1.08997 * 109.47165 * 59.99435 * 4 2 1 35 35 H 1.08997 * 109.46954 * 179.97438 * 4 2 1 36 36 H 0.97003 * 119.99992 * 0.02562 * 8 6 5 37 37 H 1.09001 * 113.61452 * 334.65839 * 11 9 8 38 38 H 1.09000 * 113.69285 * 203.76262 * 11 9 8 39 39 H 0.96998 * 119.99504 * 336.53144 * 14 12 11 40 40 H 1.08002 * 119.54502 * 179.97438 * 19 18 17 41 41 H 1.08996 * 109.46934 * 125.00169 * 21 20 19 42 42 H 0.96705 * 113.99681 * 60.00115 * 22 21 20 43 43 H 1.48503 * 109.99679 * 58.68475 * 23 21 20 44 44 H 1.48501 * 109.99790 * 179.97438 * 23 21 20 45 45 H 1.07999 * 120.75624 * 180.28240 * 24 20 19 46 46 H 1.08004 * 120.46874 * 179.71080 * 25 24 20 47 47 H 1.09006 * 113.61388 * 89.15930 * 26 12 11 48 48 H 1.09001 * 113.61513 * 220.05602 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9511 -2.5094 0.5040 8 7 2.0681 -2.6656 2.4167 9 6 1.6741 -4.0668 2.5831 10 1 1.4212 -4.5503 1.6395 11 6 2.6475 -4.8815 3.4512 12 6 1.8061 -4.4476 4.6631 13 1 2.1354 -3.5096 5.1101 14 7 1.6095 -5.5107 5.6518 15 6 1.3293 -5.1968 6.9322 16 8 1.2393 -4.0319 7.2664 17 6 1.1299 -6.2719 7.9320 18 7 1.2290 -7.5423 7.5609 19 6 1.0598 -8.5264 8.4168 20 6 0.7640 -8.2705 9.7460 21 6 0.5661 -9.4083 10.7142 22 8 -0.7859 -9.4103 11.1768 23 14 0.9322 -11.0223 9.8588 24 6 0.6577 -6.9575 10.1779 25 6 0.8410 -5.9409 9.2539 26 6 0.6266 -4.2856 3.6899 27 1 -0.3633 0.5137 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1299 1.4426 0.0005 31 1 1.6767 1.9564 -0.8899 32 1 1.6766 1.9564 0.8900 33 1 1.6768 -1.7489 -1.2493 34 1 1.6767 -0.2074 -2.1392 35 1 3.1301 -0.7207 -1.2494 36 1 2.6276 -2.2367 3.0830 37 1 3.6625 -4.4840 3.4596 38 1 2.6144 -5.9537 3.2580 39 1 1.6811 -6.4405 5.3849 40 1 1.1477 -9.5481 8.0778 41 1 1.2400 -9.2853 11.5620 42 1 -1.4419 -9.5161 10.4742 43 1 2.3255 -11.0202 9.3451 44 1 0.7412 -12.1523 10.8031 45 1 0.4325 -6.7320 11.2098 46 1 0.7608 -4.9066 9.5545 47 1 0.0387 -5.1945 3.5612 48 1 0.0122 -3.4079 3.8907 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_13287726.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:26 Heat of formation + Delta-G solvation = -78.712701 kcal Electronic energy + Delta-G solvation = -30189.708535 eV Core-core repulsion = 25826.585281 eV Total energy + Delta-G solvation = -4363.123254 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.172 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.04592 -41.75398 -40.83652 -39.55464 -38.00567 -37.74913 -35.47195 -34.90610 -33.96006 -33.15034 -32.83770 -28.30167 -28.26090 -28.14191 -26.93024 -25.94676 -25.07848 -23.95649 -23.32091 -21.91029 -21.04953 -20.79901 -19.28069 -19.13619 -18.69732 -17.95550 -17.53791 -17.14116 -16.94818 -16.78253 -16.61627 -16.41946 -16.18466 -15.99974 -15.56019 -15.35307 -15.20011 -14.87429 -14.53614 -14.43519 -14.39697 -14.27432 -13.92263 -13.66923 -13.63982 -13.42937 -13.21821 -13.06950 -12.82729 -12.79921 -12.68413 -12.42979 -12.23118 -12.20640 -12.00915 -11.74789 -11.37216 -11.27076 -11.12007 -10.95221 -10.72575 -10.67778 -10.37935 -10.25464 -10.02337 -5.21269 -0.62394 0.00383 1.06361 1.16543 1.45947 1.57942 1.82344 1.88404 1.96400 2.64265 2.88626 3.09807 3.21581 3.22552 3.37977 3.39105 3.59010 3.67946 3.72953 3.80332 3.85967 3.86240 3.88832 3.99846 4.08272 4.25742 4.39630 4.47751 4.51078 4.52017 4.59272 4.65758 4.67640 4.71132 4.80713 4.81042 4.86042 4.90958 4.92210 4.94641 4.95940 5.11419 5.26136 5.30251 5.39136 5.41172 5.50853 5.62615 6.26806 6.34551 6.40803 6.57390 7.08488 7.43567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.142 3.858 10 H 0.116 0.884 11 C -0.151 4.151 12 C 0.119 3.881 13 H 0.117 0.883 14 N -0.700 5.700 15 C 0.574 3.426 16 O -0.528 6.528 17 C 0.080 3.920 18 N -0.453 5.453 19 C 0.105 3.895 20 C -0.150 4.150 21 C -0.067 4.067 22 O -0.536 6.536 23 Si 0.686 3.314 24 C -0.053 4.053 25 C -0.108 4.108 26 C -0.164 4.164 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.086 0.914 38 H 0.107 0.893 39 H 0.413 0.587 40 H 0.165 0.835 41 H 0.120 0.880 42 H 0.381 0.619 43 H -0.252 1.252 44 H -0.249 1.249 45 H 0.148 0.852 46 H 0.153 0.847 47 H 0.100 0.900 48 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.422 -2.675 -0.728 2.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.036 3.964 10 H 0.134 0.866 11 C -0.190 4.190 12 C 0.014 3.986 13 H 0.135 0.865 14 N -0.351 5.351 15 C 0.359 3.641 16 O -0.403 6.403 17 C -0.058 4.058 18 N -0.164 5.164 19 C -0.055 4.055 20 C -0.152 4.152 21 C -0.179 4.179 22 O -0.341 6.341 23 Si 0.587 3.413 24 C -0.079 4.079 25 C -0.128 4.128 26 C -0.204 4.204 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.243 0.757 37 H 0.104 0.896 38 H 0.126 0.874 39 H 0.250 0.750 40 H 0.181 0.819 41 H 0.138 0.862 42 H 0.229 0.771 43 H -0.177 1.177 44 H -0.173 1.173 45 H 0.165 0.835 46 H 0.170 0.830 47 H 0.119 0.881 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.004 -2.804 -1.314 3.255 hybrid contribution 0.274 0.447 1.461 1.552 sum 1.278 -2.357 0.148 2.685 Atomic orbital electron populations 1.22525 0.93811 1.05073 1.02735 1.22130 0.94479 0.91563 0.81814 1.21879 1.02336 0.92346 1.03359 1.22523 1.01606 1.03448 0.96535 1.86309 1.71467 1.23323 1.46763 1.18042 0.78603 0.80665 0.81935 1.90918 1.40734 1.70377 1.43227 1.44365 1.55500 1.11759 1.23852 1.21624 0.95491 0.79607 0.99636 0.86592 1.23776 0.99406 1.01771 0.94022 1.22728 0.96670 0.92352 0.86813 0.86515 1.45785 1.70554 1.10823 1.07925 1.17891 0.76678 0.87381 0.82165 1.90822 1.50717 1.18986 1.79810 1.21163 1.00337 0.91041 0.93284 1.67498 1.11669 0.99361 1.37841 1.22595 0.95904 0.98153 0.88836 1.21663 1.00520 0.96797 0.96258 1.25057 0.87774 1.04220 1.00807 1.86547 1.14024 1.96231 1.37304 0.94826 0.85087 0.76094 0.85278 1.21570 0.94332 0.91210 1.00754 1.22236 0.96234 1.01928 0.92434 1.24034 0.97521 1.03789 0.95044 0.92090 0.90926 0.89406 0.91389 0.89918 0.91373 0.89412 0.90925 0.92109 0.75722 0.89550 0.87433 0.74969 0.81870 0.86242 0.77119 1.17702 1.17327 0.83473 0.82965 0.88146 0.90133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 2 C 0.14 0.20 1.13 -90.62 -0.10 0.10 16 3 C -0.14 0.07 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 5 O -0.36 -0.94 9.94 -40.31 -0.40 -1.34 16 6 C 0.65 1.83 8.06 54.06 0.44 2.27 16 7 O -0.56 -2.80 11.48 -19.28 -0.22 -3.02 16 8 N -0.70 0.07 5.27 -57.85 -0.30 -0.23 16 9 C 0.14 -0.18 4.33 -67.03 -0.29 -0.47 16 10 H 0.12 -0.03 7.46 -51.93 -0.39 -0.42 16 11 C -0.15 0.47 7.58 -25.92 -0.20 0.28 16 12 C 0.12 -0.15 4.09 -67.12 -0.27 -0.42 16 13 H 0.12 -0.01 7.50 -51.93 -0.39 -0.40 16 14 N -0.70 0.36 5.35 -53.86 -0.29 0.07 16 15 C 0.57 1.23 7.81 -12.19 -0.10 1.14 16 16 O -0.53 -2.71 15.94 5.35 0.09 -2.62 16 17 C 0.08 0.10 6.75 -83.01 -0.56 -0.46 16 18 N -0.45 -0.07 9.54 -9.80 -0.09 -0.16 16 19 C 0.10 -0.15 9.84 -17.57 -0.17 -0.32 16 20 C -0.15 0.23 5.36 -104.36 -0.56 -0.33 16 21 C -0.07 0.15 2.82 36.01 0.10 0.25 16 22 O -0.54 0.84 12.84 -35.23 -0.45 0.39 16 23 Si 0.69 -2.02 29.83 -169.99 -5.07 -7.09 16 24 C -0.05 0.05 9.84 -39.31 -0.39 -0.34 16 25 C -0.11 -0.05 9.63 -39.05 -0.38 -0.42 16 26 C -0.16 0.17 7.69 -25.83 -0.20 -0.03 16 27 H 0.06 0.09 8.14 -51.93 -0.42 -0.34 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 33 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -0.72 8.81 -40.82 -0.36 -1.08 16 37 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 38 H 0.11 -0.47 8.11 -51.93 -0.42 -0.90 16 39 H 0.41 -0.85 8.04 -40.82 -0.33 -1.17 16 40 H 0.16 -0.65 4.92 -52.49 -0.26 -0.91 16 41 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 42 H 0.38 -2.04 8.70 45.56 0.40 -1.65 16 43 H -0.25 0.16 7.11 56.52 0.40 0.57 16 44 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 45 H 0.15 -0.32 8.06 -52.49 -0.42 -0.74 16 46 H 0.15 0.03 7.64 -52.48 -0.40 -0.37 16 47 H 0.10 -0.17 8.14 -51.93 -0.42 -0.60 16 48 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 LS Contribution 395.32 15.07 5.96 5.96 Total: 0.00 -8.95 395.32 -9.53 -18.49 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -7.02 Total: -12.16 kcal Atomic # 6 Polarization: 3.45 SS G_CDS: -1.72 Total: 1.72 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.69 Total: -0.32 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -0.99 Total: -6.59 kcal Atomic # 14 Polarization: -2.02 SS G_CDS: -5.07 Total: -7.09 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -8.95 -9.53 -18.49 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13287726.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.223 kcal (2) G-P(sol) polarization free energy of solvation -8.955 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.178 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.535 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.490 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds