Wall clock time and date at job start Sun Mar 7 2021 00:22:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.34658 * 124.84666 * 2 1 4 4 C 1.36775 * 108.39436 * 180.12810 * 3 2 1 5 5 C 1.47266 * 126.94359 * 179.89713 * 4 3 2 6 6 O 1.21623 * 120.00037 * 179.68795 * 5 4 3 7 7 N 1.34777 * 119.99887 * 359.68429 * 5 4 3 8 8 C 1.46496 * 120.00258 * 179.97438 * 7 5 4 9 9 H 1.09002 * 112.84597 * 336.20253 * 8 7 5 10 10 C 1.53783 * 113.61176 * 107.50310 * 8 7 5 11 11 C 1.53780 * 87.08087 * 89.12298 * 10 8 7 12 12 H 1.09004 * 113.61164 * 270.88728 * 11 10 8 13 13 N 1.46496 * 113.61780 * 139.97705 * 11 10 8 14 14 C 1.34778 * 119.99581 * 107.49948 * 13 11 10 15 15 O 1.21511 * 120.00325 * 0.02562 * 14 13 11 16 16 O 1.34634 * 119.99953 * 179.97438 * 14 13 11 17 17 C 1.45199 * 117.00182 * 180.02562 * 16 14 13 18 18 C 1.53004 * 109.47122 * 60.00597 * 17 16 14 19 19 C 1.53007 * 109.47206 * 180.02562 * 17 16 14 20 20 C 1.53002 * 109.47583 * 300.00338 * 17 16 14 21 21 C 1.53772 * 113.61760 * 205.00304 * 8 7 5 22 22 C 1.46691 * 106.11451 * 359.63883 * 4 3 2 23 23 C 1.34485 * 106.33273 * 0.21902 * 22 4 3 24 24 C 1.50697 * 125.57320 * 179.97438 * 23 22 4 25 25 O 1.42896 * 109.47091 * 150.02793 * 24 23 22 26 26 Si 1.86301 * 109.46773 * 30.02928 * 24 23 22 27 27 H 1.09003 * 109.47383 * 270.28681 * 1 2 3 28 28 H 1.08997 * 109.47520 * 30.29292 * 1 2 3 29 29 H 1.09007 * 109.47149 * 150.29042 * 1 2 3 30 30 H 1.07998 * 125.80704 * 359.97438 * 3 2 1 31 31 H 0.96999 * 120.00047 * 0.02562 * 7 5 4 32 32 H 1.09002 * 113.61009 * 203.66947 * 10 8 7 33 33 H 1.08998 * 113.61477 * 334.57012 * 10 8 7 34 34 H 0.96991 * 120.00267 * 287.50469 * 13 11 10 35 35 H 1.08991 * 109.47022 * 59.99670 * 18 17 16 36 36 H 1.08999 * 109.47052 * 180.02562 * 18 17 16 37 37 H 1.08999 * 109.46407 * 299.99929 * 18 17 16 38 38 H 1.09006 * 109.46608 * 60.00526 * 19 17 16 39 39 H 1.08999 * 109.46888 * 179.97438 * 19 17 16 40 40 H 1.08991 * 109.47273 * 300.00536 * 19 17 16 41 41 H 1.09000 * 109.46593 * 59.99224 * 20 17 16 42 42 H 1.08992 * 109.47628 * 179.97438 * 20 17 16 43 43 H 1.09003 * 109.46957 * 300.00469 * 20 17 16 44 44 H 1.09006 * 113.61862 * 25.43396 * 21 8 7 45 45 H 1.09001 * 113.61811 * 156.25393 * 21 8 7 46 46 H 1.07996 * 126.83277 * 180.26280 * 22 4 3 47 47 H 1.09003 * 109.47385 * 270.03371 * 24 23 22 48 48 H 0.96693 * 114.00079 * 299.99943 * 25 24 23 49 49 H 1.48496 * 110.00148 * 58.68367 * 26 24 23 50 50 H 1.48502 * 109.99785 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2344 1.1051 0.0000 4 6 3.5461 0.7177 -0.0029 5 6 4.7283 1.5959 -0.0061 6 8 5.8446 1.1129 -0.0027 7 7 4.5733 2.9347 -0.0127 8 6 5.7493 3.8083 -0.0153 9 1 6.6365 3.3248 0.3936 10 6 5.9928 4.5093 -1.3622 11 6 5.0875 5.6408 -0.8476 12 1 4.0315 5.4918 -1.0731 13 7 5.5630 6.9803 -1.2024 14 6 4.9180 7.6966 -2.1444 15 8 3.9420 7.2317 -2.6991 16 8 5.3547 8.9278 -2.4702 17 6 4.6111 9.6419 -3.4927 18 6 3.1631 9.8272 -3.0345 19 6 5.2517 11.0116 -3.7264 20 6 4.6351 8.8393 -4.7950 21 6 5.4815 5.2035 0.5731 22 6 3.5375 -0.7491 0.0041 23 6 2.2447 -1.1197 0.0056 24 6 1.7398 -2.5396 0.0118 25 8 0.4805 -2.5943 0.6850 26 14 2.9645 -3.6303 0.8957 27 1 -0.3634 0.0051 1.0277 28 1 -0.3634 0.8873 -0.5183 29 1 -0.3634 -0.8926 -0.5093 30 1 1.8766 2.1241 -0.0004 31 1 3.6830 3.3198 -0.0151 32 1 7.0283 4.8138 -1.5149 33 1 5.5784 3.9722 -2.2153 34 1 6.3419 7.3515 -0.7594 35 1 3.1459 10.3990 -2.1067 36 1 2.6048 10.3628 -3.8022 37 1 2.7070 8.8513 -2.8683 38 1 6.2832 10.8791 -4.0531 39 1 4.6938 11.5473 -4.4943 40 1 5.2350 11.5835 -2.7988 41 1 4.1790 7.8633 -4.6287 42 1 4.0766 9.3750 -5.5624 43 1 5.6667 8.7072 -5.1214 44 1 4.6542 5.2269 1.2825 45 1 6.3768 5.6973 0.9508 46 1 4.3981 -1.4016 0.0081 47 1 1.6187 -2.8866 -1.0144 48 1 0.5133 -2.2992 1.6052 49 1 3.1625 -3.1486 2.2863 50 1 2.4778 -5.0332 0.9092 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_13287730.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:28 Heat of formation + Delta-G solvation = -70.131365 kcal Electronic energy + Delta-G solvation = -31256.098623 eV Core-core repulsion = 26866.036005 eV Total energy + Delta-G solvation = -4390.062618 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.47087 -41.92091 -40.96815 -39.37859 -37.93549 -37.83936 -35.54651 -34.80088 -33.83061 -33.20734 -31.26482 -28.37280 -28.30776 -27.71979 -26.76764 -26.50865 -25.72749 -23.86001 -23.04610 -21.36520 -21.02710 -20.69412 -20.40512 -19.27191 -18.96753 -17.91610 -17.45859 -17.19182 -17.17969 -16.80301 -16.73969 -16.49705 -15.88365 -15.71877 -15.48553 -15.42365 -15.34966 -15.15001 -14.66221 -14.51544 -14.38499 -14.08180 -13.85534 -13.52984 -13.47574 -13.35778 -13.20032 -13.15251 -13.11855 -13.05691 -12.91307 -12.86936 -12.53945 -12.40859 -12.29769 -12.00763 -11.91819 -11.62624 -11.39350 -11.12592 -11.02097 -10.94826 -10.23530 -10.04785 -9.57224 -9.21042 -4.89254 0.72996 1.03798 1.18434 1.45395 1.63079 1.73701 1.80487 2.04613 2.23682 2.54434 3.15437 3.20874 3.38004 3.52649 3.57058 3.73798 3.79104 3.85008 3.88161 3.94076 3.95487 3.99647 4.27706 4.39782 4.45242 4.46905 4.52923 4.56876 4.60664 4.68167 4.73132 4.74459 4.76006 4.80683 4.83963 4.87130 4.87416 4.91837 4.97200 4.99929 5.02940 5.12765 5.26474 5.27137 5.37420 5.57920 5.61009 5.67868 5.96695 6.21896 6.35265 6.40653 6.61797 7.33498 7.34463 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.427 5.427 3 C 0.070 3.930 4 C -0.261 4.261 5 C 0.592 3.408 6 O -0.588 6.588 7 N -0.702 5.702 8 C 0.122 3.878 9 H 0.098 0.902 10 C -0.164 4.164 11 C 0.140 3.860 12 H 0.110 0.890 13 N -0.689 5.689 14 C 0.643 3.357 15 O -0.594 6.594 16 O -0.370 6.370 17 C 0.127 3.873 18 C -0.179 4.179 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.130 4.130 22 C -0.154 4.154 23 C -0.023 4.023 24 C -0.044 4.044 25 O -0.541 6.541 26 Si 0.774 3.226 27 H 0.088 0.912 28 H 0.101 0.899 29 H 0.093 0.907 30 H 0.205 0.795 31 H 0.412 0.588 32 H 0.103 0.897 33 H 0.060 0.940 34 H 0.418 0.582 35 H 0.062 0.938 36 H 0.085 0.915 37 H 0.065 0.935 38 H 0.068 0.932 39 H 0.098 0.902 40 H 0.070 0.930 41 H 0.063 0.937 42 H 0.086 0.914 43 H 0.060 0.940 44 H 0.098 0.902 45 H 0.122 0.878 46 H 0.156 0.844 47 H 0.132 0.868 48 H 0.386 0.614 49 H -0.294 1.294 50 H -0.289 1.289 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.940 4.586 1.268 5.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.101 5.101 3 C -0.068 4.068 4 C -0.271 4.271 5 C 0.383 3.617 6 O -0.469 6.469 7 N -0.354 5.354 8 C 0.016 3.984 9 H 0.116 0.884 10 C -0.204 4.204 11 C 0.037 3.963 12 H 0.128 0.872 13 N -0.348 5.348 14 C 0.396 3.604 15 O -0.485 6.485 16 O -0.285 6.285 17 C 0.091 3.909 18 C -0.236 4.236 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.169 4.169 22 C -0.178 4.178 23 C -0.133 4.133 24 C -0.154 4.154 25 O -0.348 6.348 26 Si 0.678 3.322 27 H 0.106 0.894 28 H 0.120 0.880 29 H 0.112 0.888 30 H 0.221 0.779 31 H 0.248 0.752 32 H 0.121 0.879 33 H 0.079 0.921 34 H 0.256 0.744 35 H 0.081 0.919 36 H 0.104 0.896 37 H 0.084 0.916 38 H 0.087 0.913 39 H 0.116 0.884 40 H 0.089 0.911 41 H 0.082 0.918 42 H 0.105 0.895 43 H 0.079 0.921 44 H 0.116 0.884 45 H 0.140 0.860 46 H 0.173 0.827 47 H 0.150 0.850 48 H 0.235 0.765 49 H -0.221 1.221 50 H -0.216 1.216 Dipole moment (debyes) X Y Z Total from point charges -3.097 3.316 1.040 4.655 hybrid contribution -0.837 0.638 0.653 1.239 sum -3.934 3.954 1.693 5.829 Atomic orbital electron populations 1.22441 0.74631 1.05853 1.04880 1.43717 1.08021 1.04684 1.53696 1.22387 0.89182 0.93123 1.02101 1.20326 0.92124 0.94022 1.20620 1.17631 0.87813 0.81995 0.74272 1.90752 1.27547 1.76039 1.52585 1.45389 1.09809 1.04814 1.75352 1.21595 0.89775 0.90213 0.96826 0.88363 1.24003 1.01689 0.96727 0.97975 1.22678 0.99332 0.78166 0.96172 0.87202 1.44753 1.33351 1.16925 1.39771 1.18440 0.81473 0.80274 0.80182 1.90895 1.29062 1.72332 1.56176 1.86314 1.57341 1.27672 1.57148 1.22338 0.91557 0.91876 0.85121 1.22465 0.95093 1.03459 1.02607 1.21894 1.01862 0.92190 1.03581 1.22473 1.02846 1.01804 0.96620 1.23717 1.04798 0.93120 0.95274 1.21821 0.95587 0.93498 1.06909 1.20867 0.90488 0.89752 1.12153 1.24737 0.92615 0.94026 1.04044 1.86557 1.29426 1.88849 1.30015 0.93343 0.84504 0.74581 0.79798 0.89390 0.88014 0.88809 0.77858 0.75162 0.87897 0.92119 0.74414 0.91860 0.89587 0.91621 0.91295 0.88388 0.91104 0.91758 0.89533 0.92122 0.88379 0.85954 0.82659 0.85042 0.76466 1.22084 1.21588 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.48 9.81 127.77 1.25 0.77 16 2 N -0.43 0.94 3.09 -533.24 -1.65 -0.70 16 3 C 0.07 -0.17 10.83 83.92 0.91 0.74 16 4 C -0.26 -1.10 6.29 -19.04 -0.12 -1.22 16 5 C 0.59 4.25 7.81 86.62 0.68 4.93 16 6 O -0.59 -9.40 16.57 -4.11 -0.07 -9.47 16 7 N -0.70 0.41 5.25 -443.47 -2.33 -1.92 16 8 C 0.12 -0.18 4.32 45.52 0.20 0.02 16 9 H 0.10 0.23 7.46 -2.39 -0.02 0.21 16 10 C -0.16 0.15 7.68 31.12 0.24 0.39 16 11 C 0.14 -0.43 4.12 45.52 0.19 -0.24 16 12 H 0.11 -0.11 7.47 -2.38 -0.02 -0.13 16 13 N -0.69 0.96 5.36 -567.61 -3.04 -2.09 16 14 C 0.64 3.43 8.06 129.79 1.05 4.48 16 15 O -0.59 -6.15 11.48 19.81 0.23 -5.93 16 16 O -0.37 -1.70 9.94 -55.43 -0.55 -2.25 16 17 C 0.13 0.29 1.13 -10.79 -0.01 0.28 16 18 C -0.18 -0.38 8.37 71.98 0.60 0.22 16 19 C -0.14 0.34 8.85 71.98 0.64 0.98 16 20 C -0.18 -0.54 8.37 71.98 0.60 0.07 16 21 C -0.13 0.96 7.58 31.12 0.24 1.19 16 22 C -0.15 -0.68 9.49 23.62 0.22 -0.46 16 23 C -0.02 -0.02 6.14 40.98 0.25 0.23 16 24 C -0.04 0.08 2.87 71.23 0.20 0.28 16 25 O -0.54 0.98 10.31 -148.98 -1.54 -0.56 16 26 Si 0.77 -0.48 31.12 68.60 2.13 1.65 16 27 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 28 H 0.10 -1.14 8.13 -2.39 -0.02 -1.16 16 29 H 0.09 -0.55 6.73 -2.38 -0.02 -0.56 16 30 H 0.20 -2.14 7.45 -2.91 -0.02 -2.16 16 31 H 0.41 -2.68 7.64 -92.71 -0.71 -3.39 16 32 H 0.10 -0.22 8.14 -2.39 -0.02 -0.23 16 33 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 34 H 0.42 -2.51 8.84 -92.71 -0.82 -3.33 16 35 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 36 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 37 H 0.06 0.46 5.88 -2.39 -0.01 0.45 16 38 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 39 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 40 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 41 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 42 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 43 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 44 H 0.10 -0.90 8.14 -2.38 -0.02 -0.92 16 45 H 0.12 -1.28 8.12 -2.39 -0.02 -1.30 16 46 H 0.16 0.54 6.89 -2.91 -0.02 0.52 16 47 H 0.13 -0.46 7.96 -2.39 -0.02 -0.48 16 48 H 0.39 -2.43 8.70 -74.06 -0.64 -3.08 16 49 H -0.29 -1.63 7.11 99.48 0.71 -0.92 16 50 H -0.29 -1.51 7.11 99.48 0.71 -0.80 16 Total: 0.00 -26.20 405.76 -0.83 -27.03 By element: Atomic # 1 Polarization: -17.29 SS G_CDS: -1.15 Total: -18.44 kcal Atomic # 6 Polarization: 5.53 SS G_CDS: 7.13 Total: 12.67 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -7.02 Total: -4.71 kcal Atomic # 8 Polarization: -16.28 SS G_CDS: -1.93 Total: -18.20 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: 2.13 Total: 1.65 kcal Total: -26.20 -0.83 -27.03 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13287730.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.099 kcal (2) G-P(sol) polarization free energy of solvation -26.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.304 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.828 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.033 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.131 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds