Wall clock time and date at job start Sun Mar 7 2021 00:22:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38973 * 119.96106 * 2 1 4 4 O 1.35718 * 119.90822 * 0.02562 * 3 2 1 5 5 C 1.39012 * 120.18107 * 180.02562 * 3 2 1 6 6 C 1.50702 * 119.95603 * 180.02562 * 5 3 2 7 7 O 1.42897 * 109.47358 * 285.00124 * 6 5 3 8 8 Si 1.86298 * 109.47059 * 164.99727 * 6 5 3 9 9 C 1.37680 * 120.08652 * 359.67313 * 5 3 2 10 10 C 1.39752 * 119.91252 * 0.60160 * 9 5 3 11 11 C 1.47600 * 120.09059 * 179.69315 * 10 9 5 12 12 O 1.21583 * 119.99961 * 359.72792 * 11 10 9 13 13 N 1.34777 * 120.00096 * 179.72961 * 11 10 9 14 14 C 1.46498 * 119.99828 * 180.27906 * 13 11 10 15 15 H 1.09001 * 112.85160 * 25.05344 * 14 13 11 16 16 C 1.53784 * 113.61507 * 156.25317 * 14 13 11 17 17 C 1.53776 * 87.08293 * 139.97795 * 16 14 13 18 18 H 1.08997 * 113.61431 * 220.01941 * 17 16 14 19 19 N 1.46497 * 113.61632 * 89.19922 * 17 16 14 20 20 C 1.34776 * 120.00499 * 154.99929 * 19 17 16 21 21 O 1.21513 * 119.99655 * 359.97438 * 20 19 17 22 22 O 1.34633 * 120.00627 * 180.02562 * 20 19 17 23 23 C 1.45193 * 117.00430 * 180.02562 * 22 20 19 24 24 C 1.52998 * 109.47301 * 59.99575 * 23 22 20 25 25 C 1.53004 * 109.47295 * 179.97438 * 23 22 20 26 26 C 1.53006 * 109.46736 * 299.99494 * 23 22 20 27 27 C 1.53781 * 113.61116 * 253.85697 * 14 13 11 28 28 C 1.37727 * 119.95414 * 180.02562 * 2 1 3 29 29 H 1.09001 * 109.46983 * 269.97709 * 1 2 3 30 30 H 1.08999 * 109.47111 * 29.97314 * 1 2 3 31 31 H 1.08997 * 109.47059 * 149.98112 * 1 2 3 32 32 H 0.96705 * 113.99700 * 89.99573 * 4 3 2 33 33 H 1.09003 * 109.47088 * 45.00122 * 6 5 3 34 34 H 0.96703 * 113.99793 * 299.99799 * 7 6 5 35 35 H 1.48501 * 110.00133 * 179.97438 * 8 6 5 36 36 H 1.48500 * 110.00469 * 301.31992 * 8 6 5 37 37 H 1.08007 * 120.04392 * 180.31807 * 9 5 3 38 38 H 0.97001 * 119.99727 * 359.97438 * 13 11 10 39 39 H 1.09000 * 113.61297 * 254.52834 * 16 14 13 40 40 H 1.08998 * 113.61005 * 25.34102 * 16 14 13 41 41 H 0.97001 * 120.00046 * 335.00064 * 19 17 16 42 42 H 1.08999 * 109.47252 * 60.00666 * 24 23 22 43 43 H 1.08998 * 109.47035 * 180.02562 * 24 23 22 44 44 H 1.08998 * 109.47150 * 300.00397 * 24 23 22 45 45 H 1.09002 * 109.47095 * 59.99999 * 25 23 22 46 46 H 1.08998 * 109.47099 * 179.97438 * 25 23 22 47 47 H 1.08992 * 109.46941 * 299.99464 * 25 23 22 48 48 H 1.08998 * 109.46911 * 60.00095 * 26 23 22 49 49 H 1.09003 * 109.47024 * 179.97438 * 26 23 22 50 50 H 1.09000 * 109.47263 * 300.00378 * 26 23 22 51 51 H 1.08995 * 113.61680 * 334.57196 * 27 14 13 52 52 H 1.09006 * 113.61326 * 105.47146 * 27 14 13 53 53 H 1.08001 * 120.04619 * 359.95879 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2011 1.2040 0.0000 4 8 1.5198 2.3778 0.0005 5 6 3.5912 1.2093 -0.0005 6 6 4.3387 2.5179 0.0000 7 8 4.2716 3.1054 -1.3008 8 14 6.1200 2.2153 0.4538 9 6 4.2859 0.0207 0.0057 10 6 3.5919 -1.1922 -0.0001 11 6 4.3328 -2.4688 -0.0003 12 8 5.5486 -2.4660 -0.0003 13 7 3.6616 -3.6376 -0.0004 14 6 4.3970 -4.9046 0.0057 15 1 5.3947 -4.8129 0.4350 16 6 3.5884 -6.0835 0.5724 17 6 4.2041 -6.9412 -0.5456 18 1 3.5013 -7.6426 -0.9951 19 7 5.4739 -7.5690 -0.1719 20 6 5.8751 -8.6978 -0.7895 21 8 5.1833 -9.1950 -1.6559 22 8 7.0418 -9.2751 -0.4457 23 6 7.4107 -10.4883 -1.1530 24 6 7.5240 -10.1916 -2.6497 25 6 8.7568 -10.9941 -0.6305 26 6 6.3401 -11.5573 -0.9246 27 6 4.3731 -5.6371 -1.3463 28 6 2.1947 -1.1933 -0.0005 29 1 -0.3633 -0.0004 1.0277 30 1 -0.3633 0.8902 -0.5134 31 1 -0.3633 -0.8898 -0.5141 32 1 1.3227 2.7177 0.8841 33 1 3.8882 3.1934 0.7274 34 1 4.6551 2.5581 -1.9998 35 1 6.8682 3.4981 0.4574 36 1 6.2019 1.5754 1.7914 37 1 5.3660 0.0257 0.0105 38 1 2.6916 -3.6397 0.0000 39 1 3.8976 -6.3838 1.5736 40 1 2.5096 -5.9560 0.4830 41 1 6.0260 -7.1723 0.5200 42 1 8.2867 -9.4301 -2.8125 43 1 7.8005 -11.1025 -3.1807 44 1 6.5652 -9.8311 -3.0223 45 1 8.6764 -11.2054 0.4359 46 1 9.0335 -11.9051 -1.1611 47 1 9.5192 -10.2325 -0.7936 48 1 5.3813 -11.1967 -1.2972 49 1 6.6167 -12.4679 -1.4559 50 1 6.2593 -11.7685 0.1417 51 1 3.5093 -5.3881 -1.9626 52 1 5.3148 -5.5775 -1.8919 53 1 1.6547 -2.1286 -0.0003 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_13287732.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:31 Heat of formation + Delta-G solvation = -140.322496 kcal Electronic energy + Delta-G solvation = -34818.035911 eV Core-core repulsion = 30043.447156 eV Total energy + Delta-G solvation = -4774.588755 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -42.04272 -41.69046 -40.84404 -39.68381 -37.94060 -37.83994 -37.45972 -35.58562 -34.96291 -33.98778 -33.37939 -31.58409 -28.37421 -28.31369 -27.98730 -27.02789 -26.78188 -26.25030 -24.45267 -23.43814 -22.06157 -21.60179 -21.12559 -20.64516 -19.56903 -19.33590 -18.71787 -18.11656 -17.78767 -17.41447 -17.17747 -16.91627 -16.61189 -16.41101 -16.12469 -16.04525 -15.66035 -15.57151 -15.41463 -15.23798 -14.83292 -14.71754 -14.43318 -14.28452 -14.20815 -13.94359 -13.86696 -13.51094 -13.40552 -13.27786 -13.16888 -13.08752 -12.92826 -12.88644 -12.87814 -12.79438 -12.53341 -12.35317 -12.33329 -12.20875 -11.95347 -11.67113 -11.61096 -11.40701 -11.13662 -11.07853 -10.47043 -10.29625 -10.11744 -9.95342 -9.64108 -5.05690 -0.39297 0.08136 1.11711 1.20528 1.53124 1.62508 1.70913 1.84218 2.06285 2.57080 3.08630 3.11460 3.32757 3.37876 3.50495 3.57895 3.59444 3.73089 3.75262 3.78290 3.84475 3.93418 3.99203 4.05203 4.17272 4.33454 4.41061 4.46383 4.55156 4.60653 4.62751 4.65191 4.70917 4.72766 4.75760 4.78921 4.81298 4.81890 4.86729 4.87810 4.95345 4.99730 5.04878 5.08941 5.12605 5.21090 5.26310 5.26756 5.33363 5.34889 5.49599 5.58862 5.61972 6.33766 6.46554 6.68585 6.71011 7.13261 7.30528 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.122 4.122 3 C 0.153 3.847 4 O -0.497 6.497 5 C -0.160 4.160 6 C -0.052 4.052 7 O -0.549 6.549 8 Si 0.742 3.258 9 C -0.056 4.056 10 C -0.151 4.151 11 C 0.560 3.440 12 O -0.574 6.574 13 N -0.699 5.699 14 C 0.120 3.880 15 H 0.101 0.899 16 C -0.130 4.130 17 C 0.135 3.865 18 H 0.107 0.893 19 N -0.687 5.687 20 C 0.647 3.353 21 O -0.590 6.590 22 O -0.371 6.371 23 C 0.127 3.873 24 C -0.180 4.180 25 C -0.139 4.139 26 C -0.179 4.179 27 C -0.162 4.162 28 C -0.053 4.053 29 H 0.085 0.915 30 H 0.067 0.933 31 H 0.086 0.914 32 H 0.409 0.591 33 H 0.112 0.888 34 H 0.392 0.608 35 H -0.288 1.288 36 H -0.288 1.288 37 H 0.141 0.859 38 H 0.417 0.583 39 H 0.094 0.906 40 H 0.132 0.868 41 H 0.415 0.585 42 H 0.059 0.941 43 H 0.087 0.913 44 H 0.064 0.936 45 H 0.070 0.930 46 H 0.099 0.901 47 H 0.067 0.933 48 H 0.065 0.935 49 H 0.086 0.914 50 H 0.062 0.938 51 H 0.112 0.888 52 H 0.057 0.943 53 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.456 -3.234 2.569 6.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.123 4.123 3 C 0.107 3.893 4 O -0.310 6.310 5 C -0.161 4.161 6 C -0.163 4.163 7 O -0.356 6.356 8 Si 0.648 3.352 9 C -0.075 4.075 10 C -0.154 4.154 11 C 0.349 3.651 12 O -0.454 6.454 13 N -0.351 5.351 14 C 0.015 3.985 15 H 0.119 0.881 16 C -0.168 4.168 17 C 0.030 3.970 18 H 0.125 0.875 19 N -0.346 5.346 20 C 0.400 3.600 21 O -0.481 6.481 22 O -0.285 6.285 23 C 0.091 3.909 24 C -0.238 4.238 25 C -0.196 4.196 26 C -0.236 4.236 27 C -0.202 4.202 28 C -0.072 4.072 29 H 0.103 0.897 30 H 0.086 0.914 31 H 0.105 0.895 32 H 0.269 0.731 33 H 0.130 0.870 34 H 0.241 0.759 35 H -0.216 1.216 36 H -0.215 1.215 37 H 0.158 0.842 38 H 0.256 0.744 39 H 0.113 0.887 40 H 0.150 0.850 41 H 0.252 0.748 42 H 0.078 0.922 43 H 0.106 0.894 44 H 0.083 0.917 45 H 0.089 0.911 46 H 0.117 0.883 47 H 0.086 0.914 48 H 0.084 0.916 49 H 0.105 0.895 50 H 0.081 0.919 51 H 0.130 0.870 52 H 0.076 0.924 53 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -3.504 -2.977 2.433 5.202 hybrid contribution -0.404 0.612 0.831 1.108 sum -3.908 -2.365 3.264 5.615 Atomic orbital electron populations 1.20765 0.88335 1.04135 1.03622 1.20456 0.98313 0.91789 1.01692 1.18504 0.88803 0.85916 0.96081 1.84742 1.75536 1.35831 1.34912 1.20628 0.94262 0.95718 1.05500 1.24830 1.09121 0.93021 0.89364 1.86508 1.84859 1.47648 1.16596 0.93780 0.76193 0.80830 0.84353 1.21003 1.00000 0.90704 0.95782 1.19836 0.94343 0.92735 1.08469 1.18365 0.86834 0.84574 0.75370 1.90793 1.15106 1.88079 1.51446 1.45733 1.10956 1.04403 1.73984 1.22646 0.97335 0.81540 0.97010 0.88070 1.23726 1.02332 0.91782 0.98959 1.21725 0.83958 0.93616 0.97664 0.87468 1.44422 1.23873 1.24415 1.41886 1.18298 0.80192 0.81164 0.80312 1.90905 1.56979 1.65482 1.34708 1.86313 1.36991 1.42156 1.63079 1.22361 0.96385 0.80446 0.91710 1.22476 1.03161 1.03503 0.94620 1.21897 0.92778 1.02234 1.02642 1.22471 0.99588 0.98870 1.02712 1.24031 1.03599 0.94996 0.97532 1.21394 0.91692 0.99024 0.95081 0.89690 0.91427 0.89468 0.73064 0.87021 0.75869 1.21565 1.21509 0.84210 0.74375 0.88749 0.84988 0.74786 0.92156 0.89411 0.91675 0.91132 0.88264 0.91350 0.91595 0.89475 0.91863 0.86988 0.92365 0.81646 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.79 9.78 71.24 0.70 1.49 16 2 C -0.12 0.41 5.89 -19.81 -0.12 0.29 16 3 C 0.15 0.02 6.66 22.63 0.15 0.17 16 4 O -0.50 0.17 11.84 -90.39 -1.07 -0.90 16 5 C -0.16 -0.18 5.27 -19.81 -0.10 -0.28 16 6 C -0.05 -0.07 2.37 71.24 0.17 0.10 16 7 O -0.55 -1.72 12.88 -148.98 -1.92 -3.64 16 8 Si 0.74 1.32 29.91 68.60 2.05 3.37 16 9 C -0.06 -0.10 8.20 22.50 0.18 0.09 16 10 C -0.15 0.02 5.87 -20.08 -0.12 -0.09 16 11 C 0.56 1.12 7.76 86.71 0.67 1.80 16 12 O -0.57 -5.89 15.96 -3.98 -0.06 -5.95 16 13 N -0.70 3.78 5.31 -443.13 -2.35 1.43 16 14 C 0.12 -0.57 4.09 45.52 0.19 -0.39 16 15 H 0.10 -0.08 7.50 -2.39 -0.02 -0.10 16 16 C -0.13 1.25 7.58 31.12 0.24 1.49 16 17 C 0.14 -0.51 4.33 45.58 0.20 -0.31 16 18 H 0.11 -0.16 7.46 -2.39 -0.02 -0.18 16 19 N -0.69 0.26 5.27 -567.34 -2.99 -2.73 16 20 C 0.65 3.96 8.06 129.79 1.05 5.00 16 21 O -0.59 -6.44 11.48 19.80 0.23 -6.21 16 22 O -0.37 -2.06 9.94 -55.43 -0.55 -2.61 16 23 C 0.13 0.37 1.13 -10.79 -0.01 0.36 16 24 C -0.18 -0.62 8.37 71.98 0.60 -0.02 16 25 C -0.14 0.25 8.85 71.98 0.64 0.89 16 26 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 27 C -0.16 0.55 7.69 31.18 0.24 0.79 16 28 C -0.05 0.28 9.18 22.51 0.21 0.49 16 29 H 0.08 -0.78 8.14 -2.39 -0.02 -0.80 16 30 H 0.07 -0.29 7.52 -2.39 -0.02 -0.31 16 31 H 0.09 -0.87 8.08 -2.39 -0.02 -0.89 16 32 H 0.41 -3.59 9.06 -74.05 -0.67 -4.27 16 33 H 0.11 0.10 7.82 -2.39 -0.02 0.08 16 34 H 0.39 -1.60 8.70 -74.06 -0.64 -2.25 16 35 H -0.29 -2.32 7.11 99.48 0.71 -1.62 16 36 H -0.29 -2.09 7.11 99.48 0.71 -1.38 16 37 H 0.14 0.26 4.69 -2.91 -0.01 0.25 16 38 H 0.42 -5.09 6.73 -92.71 -0.62 -5.72 16 39 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 40 H 0.13 -1.91 8.11 -2.39 -0.02 -1.93 16 41 H 0.42 -1.56 8.81 -92.71 -0.82 -2.38 16 42 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 43 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 44 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 45 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 46 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 47 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 48 H 0.07 0.50 5.88 -2.39 -0.01 0.49 16 49 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 50 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 51 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 52 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 53 H 0.17 -2.14 6.39 -2.91 -0.02 -2.16 16 Total: 0.00 -27.23 428.47 -2.92 -30.15 By element: Atomic # 1 Polarization: -23.16 SS G_CDS: -1.73 Total: -24.88 kcal Atomic # 6 Polarization: 6.50 SS G_CDS: 5.48 Total: 11.98 kcal Atomic # 7 Polarization: 4.05 SS G_CDS: -5.34 Total: -1.30 kcal Atomic # 8 Polarization: -15.94 SS G_CDS: -3.38 Total: -19.31 kcal Atomic # 14 Polarization: 1.32 SS G_CDS: 2.05 Total: 3.37 kcal Total: -27.23 -2.92 -30.15 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13287732.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.173 kcal (2) G-P(sol) polarization free energy of solvation -27.232 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.150 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds