Wall clock time and date at job start Sun Mar 7 2021 00:22:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53003 * 109.47125 * 2 1 4 4 C 1.53000 * 109.47060 * 239.99950 * 2 1 3 5 5 O 1.45197 * 109.46998 * 119.99813 * 2 1 3 6 6 C 1.34644 * 117.00000 * 60.00247 * 5 2 1 7 7 O 1.21506 * 119.99795 * 359.97438 * 6 5 2 8 8 N 1.34778 * 119.99730 * 180.02562 * 6 5 2 9 9 C 1.46503 * 119.99418 * 180.02562 * 8 6 5 10 10 H 1.09000 * 112.85288 * 23.80409 * 9 8 6 11 11 C 1.53783 * 113.61007 * 154.99668 * 9 8 6 12 12 C 1.53786 * 87.08050 * 89.11544 * 11 9 8 13 13 H 1.09002 * 113.61357 * 270.88070 * 12 11 9 14 14 N 1.46497 * 113.61643 * 140.06125 * 12 11 9 15 15 C 1.34775 * 120.00126 * 156.52505 * 14 12 11 16 16 O 1.21548 * 119.99830 * 0.02562 * 15 14 12 17 17 C 1.47840 * 120.00085 * 179.97438 * 15 14 12 18 18 C 1.39526 * 120.56028 * 359.73211 * 17 15 14 19 19 N 1.31693 * 120.56515 * 179.72116 * 18 17 15 20 20 C 1.31928 * 121.88021 * 0.54313 * 19 18 17 21 21 C 1.38357 * 121.08132 * 359.73974 * 20 19 18 22 22 C 1.50699 * 120.34856 * 180.02562 * 21 20 19 23 23 O 1.42897 * 109.46799 * 119.97841 * 22 21 20 24 24 Si 1.86297 * 109.47043 * 359.97438 * 22 21 20 25 25 C 1.38352 * 119.29996 * 359.97438 * 21 20 19 26 26 C 1.53781 * 87.17350 * 25.47154 * 12 11 9 27 27 H 1.09002 * 109.47089 * 300.00040 * 1 2 3 28 28 H 1.08997 * 109.47037 * 60.00220 * 1 2 3 29 29 H 1.09000 * 109.46906 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.46994 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.46984 * 299.99813 * 3 2 1 32 32 H 1.08996 * 109.46775 * 59.99898 * 3 2 1 33 33 H 1.09000 * 109.47123 * 299.99698 * 4 2 1 34 34 H 1.08997 * 109.47334 * 60.00012 * 4 2 1 35 35 H 1.09003 * 109.47023 * 180.02562 * 4 2 1 36 36 H 0.96995 * 120.00261 * 359.97438 * 8 6 5 37 37 H 1.08992 * 113.61796 * 334.56401 * 11 9 8 38 38 H 1.09000 * 113.61157 * 203.65821 * 11 9 8 39 39 H 0.97006 * 120.00058 * 336.53149 * 14 12 11 40 40 H 1.07998 * 119.71425 * 359.97438 * 18 17 15 41 41 H 1.08001 * 119.46150 * 179.72758 * 20 19 18 42 42 H 1.08994 * 109.46818 * 239.97836 * 22 21 20 43 43 H 0.96694 * 114.00142 * 299.99881 * 23 22 21 44 44 H 1.48496 * 110.00346 * 58.68249 * 24 22 21 45 45 H 1.48505 * 109.99849 * 180.02562 * 24 22 21 46 46 H 1.08004 * 120.85672 * 179.97438 * 25 21 20 47 47 H 1.08999 * 113.61567 * 89.07405 * 26 12 11 48 48 H 1.08998 * 113.61196 * 219.97759 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9509 -2.5094 0.5040 8 7 2.0672 -2.6654 2.4172 9 6 1.6740 -4.0669 2.5831 10 1 1.4225 -4.5505 1.6393 11 6 2.6471 -4.8808 3.4523 12 6 1.8053 -4.4458 4.6636 13 1 2.1338 -3.5066 5.1089 14 7 1.6098 -5.5073 5.6541 15 6 1.3294 -5.1914 6.9339 16 8 1.2383 -4.0258 7.2663 17 6 1.1315 -6.2627 7.9334 18 6 1.2268 -7.6046 7.5633 19 7 1.0559 -8.5589 8.4546 20 6 0.7804 -8.2921 9.7169 21 6 0.6637 -6.9873 10.1622 22 6 0.3491 -6.7014 11.6080 23 8 1.4071 -5.9316 12.1824 24 14 0.1757 -8.3079 12.5352 25 6 0.8399 -5.9478 9.2663 26 6 0.6255 -4.2866 3.6902 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 3.1301 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2492 34 1 1.6767 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2490 36 1 2.6267 -2.2365 3.0834 37 1 3.6620 -4.4836 3.4606 38 1 2.6127 -5.9530 3.2592 39 1 1.6822 -6.4376 5.3888 40 1 1.4466 -7.8628 6.5379 41 1 0.6436 -9.1054 10.4142 42 1 -0.5841 -6.1419 11.6729 43 1 2.2691 -6.3688 12.1591 44 1 1.4306 -9.0945 12.4275 45 1 -0.1353 -8.0397 13.9623 46 1 0.7541 -4.9200 9.5866 47 1 0.0394 -5.1966 3.5619 48 1 0.0095 -3.4099 3.8904 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_13287814.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:40 Heat of formation + Delta-G solvation = -77.278119 kcal Electronic energy + Delta-G solvation = -30301.633446 eV Core-core repulsion = 25938.572400 eV Total energy + Delta-G solvation = -4363.061046 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.172 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.11200 -41.78228 -40.89083 -39.59550 -38.13016 -37.80070 -35.54266 -34.96573 -33.81423 -33.69756 -32.61266 -28.31918 -28.28028 -27.40281 -26.99854 -26.87934 -24.99879 -23.90934 -23.48524 -21.79318 -21.06898 -20.82895 -19.33090 -19.21709 -18.34837 -18.01081 -17.84794 -17.56357 -17.16068 -16.95321 -16.60926 -16.54983 -16.08995 -16.01914 -15.58498 -15.36839 -15.18022 -14.93142 -14.65358 -14.43295 -14.36216 -14.24781 -13.99569 -13.73159 -13.52044 -13.45663 -13.27274 -13.09823 -12.85995 -12.84910 -12.81987 -12.45951 -12.25489 -12.13388 -12.07415 -11.81236 -11.39591 -11.29399 -11.11841 -10.98104 -10.77716 -10.59808 -10.44353 -10.32213 -10.12124 -5.11017 -0.63396 -0.07386 1.08366 1.13168 1.44751 1.64580 1.81644 1.85116 1.90526 2.56864 2.94987 3.05896 3.15676 3.17779 3.30743 3.32680 3.54393 3.61684 3.66471 3.69385 3.78307 3.80677 3.84179 3.97922 4.04471 4.14622 4.33530 4.41443 4.43250 4.46455 4.57518 4.62142 4.64079 4.66775 4.78465 4.79171 4.80981 4.86057 4.87289 4.91414 4.93935 5.09432 5.17215 5.25181 5.34666 5.37236 5.47128 5.59708 6.22361 6.24028 6.37130 6.57212 6.98924 7.40224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.142 3.858 10 H 0.116 0.884 11 C -0.152 4.152 12 C 0.122 3.878 13 H 0.118 0.882 14 N -0.715 5.715 15 C 0.566 3.434 16 O -0.527 6.527 17 C -0.190 4.190 18 C 0.140 3.860 19 N -0.477 5.477 20 C 0.129 3.871 21 C -0.178 4.178 22 C -0.071 4.071 23 O -0.525 6.525 24 Si 0.685 3.315 25 C 0.012 3.988 26 C -0.165 4.165 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.408 0.592 37 H 0.087 0.913 38 H 0.107 0.893 39 H 0.402 0.598 40 H 0.162 0.838 41 H 0.164 0.836 42 H 0.125 0.875 43 H 0.377 0.623 44 H -0.255 1.255 45 H -0.250 1.250 46 H 0.152 0.848 47 H 0.100 0.900 48 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.609 -3.065 -1.045 3.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.408 3.592 7 O -0.452 6.452 8 N -0.355 5.355 9 C 0.036 3.964 10 H 0.134 0.866 11 C -0.191 4.191 12 C 0.017 3.983 13 H 0.136 0.864 14 N -0.366 5.366 15 C 0.353 3.647 16 O -0.403 6.403 17 C -0.195 4.195 18 C -0.019 4.019 19 N -0.185 5.185 20 C -0.027 4.027 21 C -0.180 4.180 22 C -0.182 4.182 23 O -0.331 6.331 24 Si 0.585 3.415 25 C -0.014 4.014 26 C -0.205 4.205 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.243 0.757 37 H 0.105 0.895 38 H 0.125 0.875 39 H 0.238 0.762 40 H 0.179 0.821 41 H 0.180 0.820 42 H 0.143 0.857 43 H 0.225 0.775 44 H -0.180 1.180 45 H -0.175 1.175 46 H 0.170 0.830 47 H 0.118 0.882 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.088 -3.343 -0.806 3.440 hybrid contribution 1.285 1.118 0.348 1.738 sum 1.373 -2.226 -0.458 2.655 Atomic orbital electron populations 1.22525 0.93801 1.05064 1.02758 1.22136 0.94484 0.91573 0.81793 1.21881 1.02342 0.92327 1.03374 1.22523 1.01611 1.03433 0.96543 1.86313 1.71451 1.23295 1.46788 1.18043 0.78590 0.80683 0.81912 1.90920 1.40703 1.70382 1.43233 1.44357 1.55572 1.11739 1.23845 1.21636 0.95431 0.79662 0.99627 0.86569 1.23786 0.99514 1.01708 0.94063 1.22707 0.96624 0.92341 0.86616 0.86426 1.45855 1.72232 1.10181 1.08358 1.18048 0.76388 0.88245 0.82036 1.90824 1.50078 1.19654 1.79762 1.21037 1.07883 0.94996 0.95577 1.23040 0.92124 0.87437 0.99265 1.67738 1.12051 1.36502 1.02203 1.22911 0.92107 0.94926 0.92755 1.21378 1.04009 0.94439 0.98168 1.24997 0.93835 1.08086 0.91246 1.86645 1.19656 1.45154 1.81690 0.95078 0.87939 0.76798 0.81666 1.21640 0.88582 1.00886 0.90337 1.24059 0.97536 1.03825 0.95048 0.92091 0.90900 0.89418 0.91379 0.89899 0.91367 0.89431 0.90898 0.92103 0.75707 0.89481 0.87503 0.76190 0.82136 0.81972 0.85719 0.77489 1.17963 1.17474 0.82992 0.88178 0.90091 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.18 1.13 -90.62 -0.10 0.08 16 3 C -0.14 0.08 8.85 37.16 0.33 0.41 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.36 -0.87 9.94 -40.34 -0.40 -1.28 16 6 C 0.65 1.66 8.06 54.06 0.44 2.10 16 7 O -0.56 -2.66 11.48 -19.28 -0.22 -2.88 16 8 N -0.70 0.32 5.27 -57.79 -0.30 0.02 16 9 C 0.14 -0.26 4.33 -66.97 -0.29 -0.55 16 10 H 0.12 -0.09 7.46 -51.93 -0.39 -0.48 16 11 C -0.15 0.61 7.58 -25.92 -0.20 0.42 16 12 C 0.12 -0.27 4.09 -67.12 -0.27 -0.54 16 13 H 0.12 -0.08 7.50 -51.93 -0.39 -0.46 16 14 N -0.71 1.62 5.32 -53.96 -0.29 1.34 16 15 C 0.57 0.56 7.78 -12.33 -0.10 0.46 16 16 O -0.53 -2.58 16.04 5.32 0.09 -2.50 16 17 C -0.19 0.00 5.89 -104.82 -0.62 -0.62 16 18 C 0.14 -0.18 10.71 -17.13 -0.18 -0.37 16 19 N -0.48 -0.07 10.35 -12.91 -0.13 -0.20 16 20 C 0.13 -0.12 9.84 -17.47 -0.17 -0.29 16 21 C -0.18 0.15 5.39 -104.54 -0.56 -0.42 16 22 C -0.07 0.10 2.83 36.01 0.10 0.21 16 23 O -0.53 -0.14 12.78 -35.23 -0.45 -0.59 16 24 Si 0.69 -1.62 29.82 -169.99 -5.07 -6.69 16 25 C 0.01 0.01 9.31 -38.87 -0.36 -0.36 16 26 C -0.16 0.29 7.70 -25.78 -0.20 0.09 16 27 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.30 5.88 -51.93 -0.31 0.00 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.41 -0.85 8.81 -40.82 -0.36 -1.21 16 37 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 38 H 0.11 -0.61 8.11 -51.93 -0.42 -1.03 16 39 H 0.40 -2.06 6.78 -40.82 -0.28 -2.34 16 40 H 0.16 -0.75 6.42 -52.49 -0.34 -1.09 16 41 H 0.16 -0.50 4.88 -52.49 -0.26 -0.75 16 42 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 43 H 0.38 -0.99 8.70 45.56 0.40 -0.59 16 44 H -0.25 0.15 7.11 56.52 0.40 0.55 16 45 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 46 H 0.15 0.20 7.74 -52.48 -0.41 -0.20 16 47 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 48 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 392.98 15.07 5.92 5.92 Total: 0.00 -9.92 392.98 -9.31 -19.23 By element: Atomic # 1 Polarization: -6.26 SS G_CDS: -6.89 Total: -13.15 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -1.57 Total: 0.77 kcal Atomic # 7 Polarization: 1.88 SS G_CDS: -0.72 Total: 1.16 kcal Atomic # 8 Polarization: -6.26 SS G_CDS: -0.99 Total: -7.24 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.07 Total: -6.69 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -9.92 -9.31 -19.23 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13287814.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.044 kcal (2) G-P(sol) polarization free energy of solvation -9.922 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.966 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.312 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.234 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds