Wall clock time and date at job start Sun Mar 7 2021 00:22:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53003 * 109.47125 * 2 1 4 4 C 1.53000 * 109.47060 * 239.99950 * 2 1 3 5 5 O 1.45197 * 109.46998 * 119.99813 * 2 1 3 6 6 C 1.34644 * 117.00000 * 60.00247 * 5 2 1 7 7 O 1.21506 * 119.99795 * 359.97438 * 6 5 2 8 8 N 1.34778 * 119.99730 * 180.02562 * 6 5 2 9 9 C 1.46503 * 119.99418 * 180.02562 * 8 6 5 10 10 H 1.09000 * 112.85288 * 23.80409 * 9 8 6 11 11 C 1.53783 * 113.61007 * 154.99668 * 9 8 6 12 12 C 1.53786 * 87.08050 * 89.11544 * 11 9 8 13 13 H 1.09002 * 113.61357 * 270.88070 * 12 11 9 14 14 N 1.46497 * 113.61643 * 140.06125 * 12 11 9 15 15 C 1.34775 * 120.00126 * 156.52505 * 14 12 11 16 16 O 1.21548 * 119.99830 * 0.02562 * 15 14 12 17 17 C 1.47840 * 120.00085 * 179.97438 * 15 14 12 18 18 C 1.39526 * 120.56028 * 359.73211 * 17 15 14 19 19 N 1.31693 * 120.56515 * 179.72116 * 18 17 15 20 20 C 1.31928 * 121.88021 * 0.54313 * 19 18 17 21 21 C 1.38357 * 121.08132 * 359.73974 * 20 19 18 22 22 C 1.50699 * 120.34856 * 180.02562 * 21 20 19 23 23 O 1.42897 * 109.46799 * 119.97841 * 22 21 20 24 24 Si 1.86297 * 109.47043 * 359.97438 * 22 21 20 25 25 C 1.38352 * 119.29996 * 359.97438 * 21 20 19 26 26 C 1.53781 * 87.17350 * 25.47154 * 12 11 9 27 27 H 1.09002 * 109.47089 * 300.00040 * 1 2 3 28 28 H 1.08997 * 109.47037 * 60.00220 * 1 2 3 29 29 H 1.09000 * 109.46906 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.46994 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.46984 * 299.99813 * 3 2 1 32 32 H 1.08996 * 109.46775 * 59.99898 * 3 2 1 33 33 H 1.09000 * 109.47123 * 299.99698 * 4 2 1 34 34 H 1.08997 * 109.47334 * 60.00012 * 4 2 1 35 35 H 1.09003 * 109.47023 * 180.02562 * 4 2 1 36 36 H 0.96995 * 120.00261 * 359.97438 * 8 6 5 37 37 H 1.08992 * 113.61796 * 334.56401 * 11 9 8 38 38 H 1.09000 * 113.61157 * 203.65821 * 11 9 8 39 39 H 0.97006 * 120.00058 * 336.53149 * 14 12 11 40 40 H 1.07998 * 119.71425 * 359.97438 * 18 17 15 41 41 H 1.08001 * 119.46150 * 179.72758 * 20 19 18 42 42 H 1.08994 * 109.46818 * 239.97836 * 22 21 20 43 43 H 0.96694 * 114.00142 * 299.99881 * 23 22 21 44 44 H 1.48496 * 110.00346 * 58.68249 * 24 22 21 45 45 H 1.48505 * 109.99849 * 180.02562 * 24 22 21 46 46 H 1.08004 * 120.85672 * 179.97438 * 25 21 20 47 47 H 1.08999 * 113.61567 * 89.07405 * 26 12 11 48 48 H 1.08998 * 113.61196 * 219.97759 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9509 -2.5094 0.5040 8 7 2.0672 -2.6654 2.4172 9 6 1.6740 -4.0669 2.5831 10 1 1.4225 -4.5505 1.6393 11 6 2.6471 -4.8808 3.4523 12 6 1.8053 -4.4458 4.6636 13 1 2.1338 -3.5066 5.1089 14 7 1.6098 -5.5073 5.6541 15 6 1.3294 -5.1914 6.9339 16 8 1.2383 -4.0258 7.2663 17 6 1.1315 -6.2627 7.9334 18 6 1.2268 -7.6046 7.5633 19 7 1.0559 -8.5589 8.4546 20 6 0.7804 -8.2921 9.7169 21 6 0.6637 -6.9873 10.1622 22 6 0.3491 -6.7014 11.6080 23 8 1.4071 -5.9316 12.1824 24 14 0.1757 -8.3079 12.5352 25 6 0.8399 -5.9478 9.2663 26 6 0.6255 -4.2866 3.6902 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 3.1301 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2492 34 1 1.6767 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2490 36 1 2.6267 -2.2365 3.0834 37 1 3.6620 -4.4836 3.4606 38 1 2.6127 -5.9530 3.2592 39 1 1.6822 -6.4376 5.3888 40 1 1.4466 -7.8628 6.5379 41 1 0.6436 -9.1054 10.4142 42 1 -0.5841 -6.1419 11.6729 43 1 2.2691 -6.3688 12.1591 44 1 1.4306 -9.0945 12.4275 45 1 -0.1353 -8.0397 13.9623 46 1 0.7541 -4.9200 9.5866 47 1 0.0394 -5.1966 3.5619 48 1 0.0095 -3.4099 3.8904 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_13287814.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:39 Heat of formation + Delta-G solvation = -81.050940 kcal Electronic energy + Delta-G solvation = -30301.797047 eV Core-core repulsion = 25938.572400 eV Total energy + Delta-G solvation = -4363.224648 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.172 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.11640 -41.83379 -40.86059 -39.62983 -38.09158 -37.92209 -35.63653 -35.03202 -33.78687 -33.70199 -32.55852 -28.38897 -28.32790 -27.32239 -26.85774 -26.79751 -24.97455 -23.86322 -23.50527 -21.78938 -21.16332 -20.74626 -19.39493 -19.20894 -18.28661 -17.94312 -17.83052 -17.60360 -17.25352 -16.97538 -16.55213 -16.50138 -16.10895 -16.01831 -15.65416 -15.43040 -15.20422 -14.90045 -14.61753 -14.42413 -14.37903 -14.21889 -13.93254 -13.54395 -13.44619 -13.42190 -13.18749 -13.11165 -12.94285 -12.89376 -12.81302 -12.55507 -12.35229 -12.12340 -11.99649 -11.72258 -11.44894 -11.41837 -11.15440 -11.11312 -10.72345 -10.57371 -10.39699 -10.28853 -10.07279 -4.95068 -0.57967 -0.03392 1.09759 1.21702 1.57659 1.62612 1.68958 1.91380 1.99167 2.61960 3.06503 3.10127 3.30305 3.31714 3.39847 3.47375 3.64972 3.71512 3.71621 3.74968 3.76597 3.80771 3.91946 3.96897 4.10150 4.28081 4.41476 4.52294 4.53019 4.59340 4.63139 4.68460 4.73657 4.74250 4.80049 4.83491 4.85181 4.85553 4.90165 4.95328 4.96563 5.10121 5.22711 5.24969 5.30391 5.33504 5.46319 5.57685 6.31000 6.36384 6.39944 6.65350 7.02947 7.28322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.647 3.353 7 O -0.590 6.590 8 N -0.687 5.687 9 C 0.135 3.865 10 H 0.109 0.891 11 C -0.129 4.129 12 C 0.119 3.881 13 H 0.100 0.900 14 N -0.696 5.696 15 C 0.565 3.435 16 O -0.576 6.576 17 C -0.198 4.198 18 C 0.149 3.851 19 N -0.493 5.493 20 C 0.130 3.870 21 C -0.174 4.174 22 C -0.083 4.083 23 O -0.547 6.547 24 Si 0.775 3.225 25 C -0.003 4.003 26 C -0.162 4.162 27 H 0.059 0.941 28 H 0.088 0.912 29 H 0.064 0.936 30 H 0.070 0.930 31 H 0.099 0.901 32 H 0.067 0.933 33 H 0.065 0.935 34 H 0.087 0.913 35 H 0.062 0.938 36 H 0.415 0.585 37 H 0.095 0.905 38 H 0.134 0.866 39 H 0.419 0.581 40 H 0.195 0.805 41 H 0.183 0.817 42 H 0.129 0.871 43 H 0.388 0.612 44 H -0.272 1.272 45 H -0.299 1.299 46 H 0.135 0.865 47 H 0.114 0.886 48 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.223 -4.465 -1.782 4.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.236 4.236 5 O -0.285 6.285 6 C 0.400 3.600 7 O -0.480 6.480 8 N -0.346 5.346 9 C 0.030 3.970 10 H 0.127 0.873 11 C -0.167 4.167 12 C 0.014 3.986 13 H 0.118 0.882 14 N -0.347 5.347 15 C 0.352 3.648 16 O -0.456 6.456 17 C -0.203 4.203 18 C -0.010 4.010 19 N -0.201 5.201 20 C -0.026 4.026 21 C -0.177 4.177 22 C -0.192 4.192 23 O -0.356 6.356 24 Si 0.678 3.322 25 C -0.030 4.030 26 C -0.202 4.202 27 H 0.078 0.922 28 H 0.106 0.894 29 H 0.083 0.917 30 H 0.089 0.911 31 H 0.118 0.882 32 H 0.086 0.914 33 H 0.084 0.916 34 H 0.106 0.894 35 H 0.082 0.918 36 H 0.252 0.748 37 H 0.113 0.887 38 H 0.152 0.848 39 H 0.258 0.742 40 H 0.212 0.788 41 H 0.200 0.800 42 H 0.146 0.854 43 H 0.237 0.763 44 H -0.198 1.198 45 H -0.227 1.227 46 H 0.153 0.847 47 H 0.132 0.868 48 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 0.723 -4.772 -1.577 5.078 hybrid contribution 1.075 1.576 0.605 2.001 sum 1.798 -3.196 -0.973 3.794 Atomic orbital electron populations 1.22477 0.94097 1.03733 1.03440 1.22371 0.94427 0.92591 0.81567 1.21897 1.02498 0.90947 1.04189 1.22468 1.01684 1.02291 0.97173 1.86318 1.71551 1.23304 1.47367 1.18299 0.78546 0.80779 0.82335 1.90903 1.41947 1.70855 1.44341 1.44428 1.54945 1.12196 1.23070 1.21750 0.96565 0.79143 0.99494 0.87300 1.23736 0.98934 1.02829 0.91206 1.22671 0.97050 0.91993 0.86894 0.88226 1.45723 1.70631 1.11164 1.07232 1.18253 0.75829 0.87723 0.82975 1.90802 1.52582 1.21541 1.80671 1.21016 1.08733 0.95462 0.95108 1.23496 0.90593 0.86369 1.00519 1.67823 1.12717 1.36877 1.02695 1.23224 0.91177 0.95204 0.92980 1.21358 1.03959 0.94272 0.98076 1.25287 0.93627 1.09032 0.91212 1.86612 1.20671 1.46387 1.81894 0.94081 0.85675 0.74635 0.77780 1.21643 0.89505 1.00565 0.91243 1.24057 0.97489 1.03446 0.95206 0.92223 0.89367 0.91673 0.91112 0.88228 0.91405 0.91601 0.89437 0.91846 0.74814 0.88678 0.84769 0.74189 0.78806 0.80018 0.85361 0.76297 1.19839 1.22669 0.84723 0.86797 0.92491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.67 8.37 71.98 0.60 -0.07 16 2 C 0.13 0.41 1.13 -10.79 -0.01 0.40 16 3 C -0.14 0.21 8.85 71.98 0.64 0.85 16 4 C -0.18 -0.52 8.37 71.98 0.60 0.08 16 5 O -0.37 -2.19 9.94 -55.53 -0.55 -2.74 16 6 C 0.65 4.19 8.06 129.79 1.05 5.23 16 7 O -0.59 -6.62 11.48 19.82 0.23 -6.40 16 8 N -0.69 0.00 5.27 -567.15 -2.99 -2.98 16 9 C 0.14 -0.47 4.33 45.61 0.20 -0.27 16 10 H 0.11 -0.15 7.46 -2.39 -0.02 -0.17 16 11 C -0.13 1.21 7.58 31.12 0.24 1.45 16 12 C 0.12 -0.52 4.09 45.52 0.19 -0.34 16 13 H 0.10 -0.01 7.50 -2.39 -0.02 -0.02 16 14 N -0.70 3.61 5.32 -442.91 -2.35 1.25 16 15 C 0.56 1.50 7.78 86.79 0.68 2.17 16 16 O -0.58 -6.86 16.04 -3.87 -0.06 -6.92 16 17 C -0.20 -0.05 5.89 -19.99 -0.12 -0.17 16 18 C 0.15 -0.58 10.71 85.02 0.91 0.33 16 19 N -0.49 0.54 10.35 -194.75 -2.01 -1.48 16 20 C 0.13 -0.36 9.84 84.71 0.83 0.47 16 21 C -0.17 0.25 5.39 -19.81 -0.11 0.14 16 22 C -0.08 0.20 2.83 71.24 0.20 0.40 16 23 O -0.55 -0.83 12.78 -148.98 -1.90 -2.73 16 24 Si 0.77 -3.83 29.82 68.60 2.05 -1.78 16 25 C 0.00 -0.01 9.31 22.73 0.21 0.20 16 26 C -0.16 0.49 7.70 31.21 0.24 0.73 16 27 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 28 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 29 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 30 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 31 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 32 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 33 H 0.07 0.51 5.88 -2.39 -0.01 0.50 16 34 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 35 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 36 H 0.42 -1.37 8.81 -92.71 -0.82 -2.19 16 37 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 38 H 0.13 -1.93 8.11 -2.39 -0.02 -1.95 16 39 H 0.42 -5.17 6.78 -92.70 -0.63 -5.80 16 40 H 0.20 -2.33 6.42 -2.91 -0.02 -2.35 16 41 H 0.18 -1.39 4.88 -2.91 -0.01 -1.41 16 42 H 0.13 -0.46 7.96 -2.39 -0.02 -0.47 16 43 H 0.39 -1.73 8.70 -74.06 -0.64 -2.37 16 44 H -0.27 0.55 7.11 99.48 0.71 1.26 16 45 H -0.30 -0.97 7.11 99.48 0.71 -0.27 16 46 H 0.13 0.72 7.74 -2.91 -0.02 0.70 16 47 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 48 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 Total: 0.00 -25.96 392.98 -2.28 -28.25 By element: Atomic # 1 Polarization: -15.05 SS G_CDS: -1.03 Total: -16.08 kcal Atomic # 6 Polarization: 5.27 SS G_CDS: 6.34 Total: 11.61 kcal Atomic # 7 Polarization: 4.15 SS G_CDS: -7.36 Total: -3.21 kcal Atomic # 8 Polarization: -16.50 SS G_CDS: -2.29 Total: -18.79 kcal Atomic # 14 Polarization: -3.83 SS G_CDS: 2.05 Total: -1.78 kcal Total: -25.96 -2.28 -28.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13287814.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.804 kcal (2) G-P(sol) polarization free energy of solvation -25.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.247 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.051 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds