Wall clock time and date at job start Sun Mar 7 2021 00:22:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.36425 * 125.80208 * 2 1 4 4 C 1.47375 * 127.18825 * 359.96553 * 3 2 1 5 5 O 1.21614 * 120.00508 * 359.97438 * 4 3 2 6 6 N 1.34778 * 119.99501 * 180.02562 * 4 3 2 7 7 C 1.46506 * 119.99625 * 179.97438 * 6 4 3 8 8 H 1.09000 * 112.90924 * 23.74668 * 7 6 4 9 9 C 1.53782 * 113.61308 * 154.99848 * 7 6 4 10 10 C 1.53784 * 87.08406 * 89.11317 * 9 7 6 11 11 H 1.08999 * 113.61582 * 270.80162 * 10 9 7 12 12 N 1.46497 * 113.61577 * 139.97674 * 10 9 7 13 13 C 1.34777 * 119.99707 * 154.99991 * 12 10 9 14 14 O 1.21507 * 120.00068 * 0.02562 * 13 12 10 15 15 O 1.34644 * 119.99419 * 179.97438 * 13 12 10 16 16 C 1.45206 * 116.99182 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.47226 * 60.00595 * 16 15 13 18 18 C 1.52992 * 109.47178 * 300.00057 * 16 15 13 19 19 C 1.53006 * 109.46497 * 180.02562 * 16 15 13 20 20 C 1.53780 * 113.61219 * 252.49469 * 7 6 4 21 21 C 1.47013 * 105.61220 * 180.22510 * 3 2 1 22 22 C 1.34178 * 105.96006 * 359.63145 * 21 3 2 23 23 C 1.50695 * 125.43889 * 180.12850 * 22 21 3 24 24 O 1.42895 * 109.47760 * 65.26450 * 23 22 21 25 25 Si 1.86304 * 109.46798 * 185.26606 * 23 22 21 26 26 O 1.33649 * 125.80518 * 180.02562 * 2 1 3 27 27 H 1.09003 * 109.46892 * 89.99526 * 1 2 3 28 28 H 1.08989 * 109.47045 * 209.99720 * 1 2 3 29 29 H 1.08999 * 109.46914 * 330.00449 * 1 2 3 30 30 H 0.97000 * 120.00581 * 359.97438 * 6 4 3 31 31 H 1.09001 * 113.61436 * 334.56692 * 9 7 6 32 32 H 1.08999 * 113.69211 * 203.67105 * 9 7 6 33 33 H 0.97000 * 119.99727 * 335.01055 * 12 10 9 34 34 H 1.09002 * 109.47153 * 299.99431 * 17 16 15 35 35 H 1.09001 * 109.46832 * 179.97438 * 17 16 15 36 36 H 1.09004 * 109.47261 * 59.99603 * 17 16 15 37 37 H 1.09001 * 109.47066 * 180.02562 * 18 16 15 38 38 H 1.08996 * 109.47747 * 300.00217 * 18 16 15 39 39 H 1.09002 * 109.47103 * 60.00629 * 18 16 15 40 40 H 1.08993 * 109.46955 * 300.00264 * 19 16 15 41 41 H 1.09000 * 109.47050 * 60.00093 * 19 16 15 42 42 H 1.09001 * 109.47002 * 179.97438 * 19 16 15 43 43 H 1.09003 * 113.61305 * 156.33817 * 20 7 6 44 44 H 1.09002 * 113.61833 * 25.43396 * 20 7 6 45 45 H 1.08010 * 127.01759 * 179.74513 * 21 3 2 46 46 H 1.09003 * 109.47118 * 305.26109 * 23 22 21 47 47 H 0.96693 * 114.00378 * 180.02562 * 24 23 22 48 48 H 1.48493 * 110.00153 * 299.99449 * 25 23 22 49 49 H 1.48502 * 110.00175 * 61.31962 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3051 1.1065 0.0000 4 6 1.8740 2.5157 -0.0007 5 8 0.6890 2.7892 -0.0019 6 7 2.7931 3.5015 -0.0011 7 6 2.3645 4.9025 -0.0024 8 1 1.3614 5.0398 0.4014 9 6 3.4053 5.8656 0.5928 10 6 3.9882 5.9870 -0.8251 11 1 4.7518 5.2421 -1.0486 12 7 4.4015 7.3482 -1.1751 13 6 5.3498 7.5444 -2.1125 14 8 5.8615 6.5924 -2.6677 15 8 5.7293 8.7955 -2.4345 16 6 6.7552 8.9314 -3.4530 17 6 6.2647 8.3019 -4.7583 18 6 8.0293 8.2212 -2.9915 19 6 7.0531 10.4147 -3.6820 20 6 2.5902 5.6144 -1.3467 21 6 3.6849 0.5991 -0.0056 22 6 3.5859 -0.7390 0.0000 23 6 4.7459 -1.7010 0.0001 24 8 5.4764 -1.5664 1.2208 25 14 4.1069 -3.4443 -0.1523 26 8 2.2889 -1.0839 -0.0005 27 1 -0.3633 0.0001 -1.0277 28 1 -0.3633 -0.8899 0.5137 29 1 -0.3633 0.8900 0.5138 30 1 3.7383 3.2835 -0.0006 31 1 4.0821 5.3919 1.3039 32 1 2.9773 6.7944 0.9699 33 1 3.9928 8.1082 -0.7321 34 1 6.0528 7.2452 -4.5949 35 1 7.0347 8.4043 -5.5230 36 1 5.3569 8.8079 -5.0872 37 1 8.7996 8.3237 -3.7558 38 1 8.3788 8.6697 -2.0616 39 1 7.8174 7.1646 -2.8281 40 1 6.1455 10.9209 -4.0106 41 1 7.4027 10.8628 -2.7519 42 1 7.8236 10.5168 -4.4462 43 1 1.9380 6.4743 -1.5003 44 1 2.6089 4.9381 -2.2013 45 1 4.5928 1.1841 -0.0109 46 1 5.4017 -1.4795 -0.8420 47 1 6.2392 -2.1566 1.2898 48 1 3.2116 -3.7588 0.9899 49 1 3.3725 -3.6060 -1.4329 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_13308374.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:43 Heat of formation + Delta-G solvation = -103.343926 kcal Electronic energy + Delta-G solvation = -31535.215119 eV Core-core repulsion = 27045.993634 eV Total energy + Delta-G solvation = -4489.221485 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.75457 -41.88268 -41.07408 -39.48861 -38.01384 -37.81783 -35.48323 -34.82587 -34.18018 -33.37108 -32.89123 -29.50708 -28.32949 -28.29096 -26.93164 -26.59378 -25.49904 -24.18669 -23.11696 -22.35309 -21.18897 -20.82821 -20.36961 -19.08190 -18.82033 -18.48998 -17.81249 -17.28658 -17.11799 -17.07732 -16.97069 -16.54331 -15.97841 -15.83322 -15.69320 -15.56312 -15.32601 -14.99757 -14.62128 -14.45578 -14.23081 -14.10935 -14.08130 -13.96030 -13.81298 -13.68344 -13.42940 -13.19841 -13.12750 -13.10673 -12.85108 -12.82808 -12.57511 -12.47349 -12.23844 -12.10290 -11.99793 -11.73741 -11.29683 -11.02422 -10.95846 -10.87998 -10.55387 -10.25952 -10.05507 -9.55712 -5.14099 0.28265 0.81829 1.09140 1.20322 1.48132 1.62927 1.86855 1.98331 2.06339 2.32091 3.11196 3.17252 3.24842 3.37753 3.50768 3.68646 3.72080 3.75976 3.77558 3.83330 3.85315 3.97106 4.09143 4.16509 4.38044 4.40370 4.50300 4.53143 4.53796 4.56514 4.61718 4.62799 4.67698 4.72468 4.77946 4.78669 4.86358 4.91163 4.92654 4.92886 5.08126 5.10055 5.21019 5.23874 5.36120 5.43383 5.51911 5.60043 5.92341 6.40037 6.40590 6.45066 7.19976 7.42170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.096 3.904 3 C -0.253 4.253 4 C 0.599 3.401 5 O -0.536 6.536 6 N -0.708 5.708 7 C 0.126 3.874 8 H 0.115 0.885 9 C -0.152 4.152 10 C 0.139 3.861 11 H 0.118 0.882 12 N -0.701 5.701 13 C 0.650 3.350 14 O -0.567 6.567 15 O -0.365 6.365 16 C 0.137 3.863 17 C -0.184 4.184 18 C -0.184 4.184 19 C -0.142 4.142 20 C -0.165 4.165 21 C -0.142 4.142 22 C -0.013 4.013 23 C -0.035 4.035 24 O -0.543 6.543 25 Si 0.709 3.291 26 O -0.175 6.175 27 H 0.093 0.907 28 H 0.080 0.920 29 H 0.113 0.887 30 H 0.403 0.597 31 H 0.085 0.915 32 H 0.105 0.895 33 H 0.408 0.592 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.072 0.928 38 H 0.060 0.940 39 H 0.087 0.913 40 H 0.067 0.933 41 H 0.067 0.933 42 H 0.082 0.918 43 H 0.098 0.902 44 H 0.079 0.921 45 H 0.160 0.840 46 H 0.096 0.904 47 H 0.391 0.609 48 H -0.249 1.249 49 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.183 -0.427 0.369 4.220 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.043 3.957 3 C -0.257 4.257 4 C 0.388 3.612 5 O -0.414 6.414 6 N -0.359 5.359 7 C 0.020 3.980 8 H 0.133 0.867 9 C -0.191 4.191 10 C 0.035 3.965 11 H 0.136 0.864 12 N -0.360 5.360 13 C 0.404 3.596 14 O -0.456 6.456 15 O -0.280 6.280 16 C 0.100 3.900 17 C -0.241 4.241 18 C -0.241 4.241 19 C -0.199 4.199 20 C -0.205 4.205 21 C -0.161 4.161 22 C -0.061 4.061 23 C -0.145 4.145 24 O -0.351 6.351 25 Si 0.608 3.392 26 O -0.073 6.073 27 H 0.111 0.889 28 H 0.099 0.901 29 H 0.131 0.869 30 H 0.238 0.762 31 H 0.104 0.896 32 H 0.124 0.876 33 H 0.243 0.757 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.091 0.909 38 H 0.079 0.921 39 H 0.105 0.895 40 H 0.086 0.914 41 H 0.086 0.914 42 H 0.101 0.899 43 H 0.117 0.883 44 H 0.098 0.902 45 H 0.178 0.822 46 H 0.113 0.887 47 H 0.240 0.760 48 H -0.173 1.173 49 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 2.408 -1.003 0.069 2.610 hybrid contribution 0.535 1.051 0.026 1.180 sum 2.943 0.048 0.095 2.945 Atomic orbital electron populations 1.20717 0.83236 1.05490 1.04813 1.22950 0.94082 0.82775 0.95914 1.21067 0.93200 0.93672 1.17762 1.17098 0.85326 0.83562 0.75190 1.90779 1.16458 1.83909 1.50262 1.45435 1.09789 1.04978 1.75706 1.21616 0.99812 0.79756 0.96801 0.86724 1.23798 0.98323 1.00578 0.96416 1.22675 0.96066 0.82748 0.94983 0.86379 1.44741 1.40654 1.09474 1.41100 1.18177 0.79538 0.82054 0.79839 1.90910 1.57681 1.42027 1.54945 1.86314 1.56152 1.28409 1.57110 1.22117 0.85363 0.96926 0.85580 1.22522 1.01944 1.03756 0.95906 1.22520 0.96254 1.03355 1.01979 1.21881 1.02712 0.92381 1.02948 1.24020 0.96776 1.01214 0.98478 1.22550 0.96465 0.93249 1.03871 1.21047 0.82076 0.94200 1.08773 1.23795 0.91723 1.08339 0.90631 1.86458 1.45930 1.66276 1.36432 0.95259 0.85182 0.77449 0.81339 1.83694 1.16511 1.35364 1.71718 0.88886 0.90081 0.86865 0.76224 0.89593 0.87636 0.75715 0.89441 0.90934 0.92122 0.90929 0.92118 0.89456 0.91387 0.91389 0.89928 0.88315 0.90177 0.82209 0.88654 0.75995 1.17317 1.17699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.11 9.89 36.01 0.36 0.24 16 2 C 0.10 0.34 7.37 -34.96 -0.26 0.08 16 3 C -0.25 -0.81 6.31 -103.28 -0.65 -1.47 16 4 C 0.60 1.96 7.81 -12.54 -0.10 1.86 16 5 O -0.54 -3.08 14.45 5.26 0.08 -3.01 16 6 N -0.71 -0.17 5.26 -54.10 -0.28 -0.46 16 7 C 0.13 -0.09 4.32 -67.11 -0.29 -0.38 16 8 H 0.11 0.05 7.47 -51.93 -0.39 -0.34 16 9 C -0.15 0.42 7.58 -25.92 -0.20 0.23 16 10 C 0.14 -0.15 4.12 -67.11 -0.28 -0.43 16 11 H 0.12 0.00 7.46 -51.93 -0.39 -0.38 16 12 N -0.70 0.24 5.36 -57.93 -0.31 -0.07 16 13 C 0.65 1.76 8.06 54.06 0.44 2.19 16 14 O -0.57 -2.80 11.48 -19.28 -0.22 -3.02 16 15 O -0.37 -0.88 9.94 -40.33 -0.40 -1.28 16 16 C 0.14 0.19 1.13 -90.62 -0.10 0.08 16 17 C -0.18 -0.27 8.37 37.16 0.31 0.04 16 18 C -0.18 -0.23 8.37 37.15 0.31 0.08 16 19 C -0.14 0.09 8.85 37.16 0.33 0.42 16 20 C -0.16 0.11 7.68 -25.91 -0.20 -0.09 16 21 C -0.14 -0.27 10.48 -37.46 -0.39 -0.67 16 22 C -0.01 -0.04 6.22 -35.74 -0.22 -0.26 16 23 C -0.04 0.02 2.96 36.00 0.11 0.13 16 24 O -0.54 0.45 12.86 -35.23 -0.45 0.00 16 25 Si 0.71 -0.77 32.09 -169.99 -5.46 -6.23 16 26 O -0.18 -0.71 8.90 7.67 0.07 -0.64 16 27 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.08 -0.01 8.14 -51.94 -0.42 -0.43 16 29 H 0.11 0.23 6.49 -51.93 -0.34 -0.10 16 30 H 0.40 -0.63 7.87 -40.82 -0.32 -0.96 16 31 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 32 H 0.11 -0.43 8.12 -51.93 -0.42 -0.85 16 33 H 0.41 -0.99 8.84 -40.82 -0.36 -1.35 16 34 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 36 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 39 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 40 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 43 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 44 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 45 H 0.16 -0.10 7.74 -52.48 -0.41 -0.51 16 46 H 0.10 -0.30 7.96 -51.93 -0.41 -0.71 16 47 H 0.39 -2.45 8.74 45.56 0.40 -2.05 16 48 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 49 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 LS Contribution 404.22 15.07 6.09 6.09 Total: 0.00 -10.46 404.22 -9.25 -19.70 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -7.52 Total: -13.14 kcal Atomic # 6 Polarization: 2.90 SS G_CDS: -0.84 Total: 2.06 kcal Atomic # 7 Polarization: 0.06 SS G_CDS: -0.59 Total: -0.53 kcal Atomic # 8 Polarization: -7.03 SS G_CDS: -0.93 Total: -7.96 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.46 Total: -6.23 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -10.46 -9.25 -19.70 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13308374.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.641 kcal (2) G-P(sol) polarization free energy of solvation -10.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.702 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds