Wall clock time and date at job start Sun Mar 7 2021 00:22:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52996 * 109.47676 * 2 1 4 4 C 1.53004 * 109.47353 * 239.99753 * 2 1 3 5 5 O 1.45208 * 109.46830 * 120.00081 * 2 1 3 6 6 C 1.34633 * 116.99886 * 60.00120 * 5 2 1 7 7 O 1.21507 * 120.00555 * 359.97438 * 6 5 2 8 8 N 1.34784 * 119.99596 * 179.97438 * 6 5 2 9 9 C 1.46494 * 119.99635 * 179.97438 * 8 6 5 10 10 H 1.08995 * 112.85546 * 23.80497 * 9 8 6 11 11 C 1.53782 * 113.61176 * 155.00482 * 9 8 6 12 12 C 1.53784 * 87.08486 * 139.97919 * 11 9 8 13 13 H 1.08992 * 113.61454 * 220.02021 * 12 11 9 14 14 N 1.46501 * 113.61282 * 89.11189 * 12 11 9 15 15 C 1.34780 * 119.99532 * 155.00519 * 14 12 11 16 16 O 1.21587 * 119.99950 * 359.97438 * 15 14 12 17 17 C 1.47533 * 119.99781 * 179.97438 * 15 14 12 18 18 C 1.40137 * 120.18971 * 179.72005 * 17 15 14 19 19 O 1.35648 * 120.15247 * 359.97438 * 18 17 15 20 20 C 1.38722 * 119.69530 * 179.77083 * 18 17 15 21 21 C 1.38048 * 120.08468 * 0.50578 * 20 18 17 22 22 C 1.50705 * 119.80379 * 179.76605 * 21 20 18 23 23 O 1.42894 * 109.47051 * 64.97996 * 22 21 20 24 24 Si 1.86294 * 109.47069 * 184.98110 * 22 21 20 25 25 C 1.38545 * 120.39135 * 359.74729 * 21 20 18 26 26 C 1.37791 * 120.30111 * 359.97438 * 25 21 20 27 27 C 1.53783 * 87.07811 * 334.56860 * 12 11 9 28 28 H 1.08998 * 109.47144 * 300.00036 * 1 2 3 29 29 H 1.08999 * 109.46619 * 60.00302 * 1 2 3 30 30 H 1.08996 * 109.46980 * 180.02562 * 1 2 3 31 31 H 1.08994 * 109.47596 * 180.02562 * 3 2 1 32 32 H 1.09009 * 109.46889 * 300.00117 * 3 2 1 33 33 H 1.09003 * 109.46990 * 59.99073 * 3 2 1 34 34 H 1.09005 * 109.46836 * 300.00480 * 4 2 1 35 35 H 1.08999 * 109.46845 * 60.00089 * 4 2 1 36 36 H 1.08994 * 109.47403 * 180.02562 * 4 2 1 37 37 H 0.96995 * 120.00015 * 359.72334 * 8 6 5 38 38 H 1.09001 * 113.61047 * 254.52498 * 11 9 8 39 39 H 1.08994 * 113.61763 * 25.34071 * 11 9 8 40 40 H 0.96997 * 120.00104 * 334.99700 * 14 12 11 41 41 H 0.96706 * 113.99411 * 90.00234 * 19 18 17 42 42 H 1.08001 * 119.95540 * 180.27332 * 20 18 17 43 43 H 1.09000 * 109.46740 * 304.97615 * 22 21 20 44 44 H 0.96694 * 114.00232 * 59.99958 * 23 22 21 45 45 H 1.48498 * 110.00295 * 58.67851 * 24 22 21 46 46 H 1.48504 * 109.99827 * 179.97438 * 24 22 21 47 47 H 1.08001 * 119.85141 * 179.97438 * 25 21 20 48 48 H 1.08004 * 120.04382 * 180.02562 * 26 25 21 49 49 H 1.09002 * 113.60736 * 270.88373 * 27 12 11 50 50 H 1.08997 * 113.61928 * 139.98604 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5041 8 7 2.0680 -2.6657 2.4167 9 6 1.6739 -4.0668 2.5832 10 1 1.4208 -4.5503 1.6397 11 6 2.6473 -4.8815 3.4513 12 6 1.4100 -5.5542 4.0689 13 1 1.4901 -5.7124 5.1443 14 7 0.9713 -6.7514 3.3474 15 6 0.2717 -7.7071 3.9906 16 8 0.0050 -7.5759 5.1696 17 6 -0.1706 -8.9126 3.2640 18 6 -0.8932 -9.9115 3.9301 19 8 -1.1892 -9.7751 5.2469 20 6 -1.3081 -11.0385 3.2357 21 6 -1.0007 -11.1788 1.8973 22 6 -1.4500 -12.4082 1.1504 23 8 -2.8775 -12.4343 1.0911 24 14 -0.7572 -12.3722 -0.5786 25 6 -0.2819 -10.1959 1.2364 26 6 0.1332 -9.0672 1.9091 27 6 0.6282 -4.2854 3.6894 28 1 -0.3633 0.5138 0.8900 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 3.1301 1.4424 -0.0005 32 1 1.6768 1.9563 -0.8901 33 1 1.6767 1.9563 0.8899 34 1 1.6767 -1.7490 -1.2492 35 1 1.6768 -0.2075 -2.1392 36 1 3.1300 -0.7217 -1.2490 37 1 2.6311 -2.2381 3.0807 38 1 3.2756 -5.5644 2.8793 39 1 3.2147 -4.2754 4.1574 40 1 1.1843 -6.8562 2.4070 41 1 -2.0308 -9.3302 5.4167 42 1 -1.8690 -11.8089 3.7439 43 1 -1.0914 -13.2984 1.6670 44 1 -3.2666 -11.6705 0.6436 45 1 0.7258 -12.3127 -0.5304 46 1 -1.1926 -13.5797 -1.3254 47 1 -0.0459 -10.3148 0.1892 48 1 0.6930 -8.3034 1.3898 49 1 0.6426 -3.5165 4.4619 50 1 -0.3735 -4.4868 3.3099 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_13422076.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:51 Heat of formation + Delta-G solvation = -129.217828 kcal Electronic energy + Delta-G solvation = -32886.805716 eV Core-core repulsion = 28268.236115 eV Total energy + Delta-G solvation = -4618.569602 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.176 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.01006 -41.61506 -40.72121 -39.36175 -38.40599 -37.79500 -37.17936 -35.49030 -34.82158 -33.65273 -32.32508 -31.14302 -28.34526 -28.30782 -27.73859 -26.96860 -25.99193 -23.98301 -23.73220 -23.05060 -21.91435 -21.15418 -20.63996 -19.49081 -19.08561 -18.78310 -18.22997 -17.83803 -17.33403 -17.09388 -16.86728 -16.67026 -16.43597 -16.21908 -15.92705 -15.77206 -15.63305 -15.36178 -15.22435 -15.04305 -14.71389 -14.48869 -14.30988 -13.97300 -13.87619 -13.74845 -13.44709 -13.28501 -13.21396 -13.12948 -12.98515 -12.86918 -12.84533 -12.49305 -12.33818 -12.25781 -12.19060 -12.02758 -11.80650 -11.66249 -11.31564 -10.99734 -10.87816 -10.56327 -10.30795 -10.17432 -10.05591 -9.82768 -5.13803 -0.44675 0.07071 1.15451 1.17971 1.53363 1.71659 1.84500 1.88641 1.93253 2.53495 3.06241 3.08379 3.21220 3.33229 3.34519 3.40329 3.56624 3.67987 3.71361 3.75669 3.80384 3.81787 3.94654 3.95431 4.17168 4.29496 4.35026 4.47500 4.49245 4.53846 4.55575 4.61335 4.63654 4.66522 4.70378 4.76463 4.81176 4.86908 4.89255 4.91168 4.92572 5.06687 5.08436 5.16603 5.20215 5.34296 5.39983 5.47474 5.49799 5.57971 6.35244 6.39188 6.43526 6.68326 7.15439 7.39561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.567 6.567 8 N -0.702 5.702 9 C 0.139 3.861 10 H 0.119 0.881 11 C -0.153 4.153 12 C 0.126 3.874 13 H 0.114 0.886 14 N -0.713 5.713 15 C 0.563 3.437 16 O -0.514 6.514 17 C -0.165 4.165 18 C 0.174 3.826 19 O -0.476 6.476 20 C -0.129 4.129 21 C -0.075 4.075 22 C -0.074 4.074 23 O -0.536 6.536 24 Si 0.690 3.310 25 C -0.134 4.134 26 C -0.064 4.064 27 C -0.164 4.164 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.408 0.592 38 H 0.085 0.915 39 H 0.105 0.895 40 H 0.400 0.600 41 H 0.399 0.601 42 H 0.140 0.860 43 H 0.118 0.882 44 H 0.380 0.620 45 H -0.255 1.255 46 H -0.253 1.253 47 H 0.136 0.864 48 H 0.134 0.866 49 H 0.098 0.902 50 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.076 3.617 -3.880 5.413 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.456 6.456 8 N -0.360 5.360 9 C 0.035 3.965 10 H 0.136 0.864 11 C -0.192 4.192 12 C 0.020 3.980 13 H 0.132 0.868 14 N -0.366 5.366 15 C 0.351 3.649 16 O -0.390 6.390 17 C -0.169 4.169 18 C 0.128 3.872 19 O -0.288 6.288 20 C -0.148 4.148 21 C -0.076 4.076 22 C -0.185 4.185 23 O -0.342 6.342 24 Si 0.592 3.408 25 C -0.152 4.152 26 C -0.083 4.083 27 C -0.204 4.204 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.243 0.757 38 H 0.104 0.896 39 H 0.124 0.876 40 H 0.236 0.764 41 H 0.257 0.743 42 H 0.158 0.842 43 H 0.135 0.865 44 H 0.228 0.772 45 H -0.180 1.180 46 H -0.177 1.177 47 H 0.154 0.846 48 H 0.152 0.848 49 H 0.117 0.883 50 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.656 2.287 -3.672 4.632 hybrid contribution 0.027 0.305 0.347 0.462 sum 1.683 2.592 -3.325 4.539 Atomic orbital electron populations 1.22520 0.93828 1.05046 1.02728 1.22120 0.94452 0.91564 0.81839 1.21882 1.02333 0.92371 1.03360 1.22521 1.01592 1.03422 0.96565 1.86313 1.71453 1.23471 1.46745 1.18174 0.78661 0.80661 0.82089 1.90906 1.40907 1.70438 1.43322 1.44743 1.55322 1.12112 1.23827 1.22671 0.95568 0.79155 0.99071 0.86358 1.23800 0.96923 0.98923 0.99509 1.21613 0.94315 0.83725 0.98373 0.86757 1.45590 1.57102 1.19904 1.13994 1.18026 0.78023 0.82214 0.86632 1.90841 1.54774 1.78325 1.15020 1.20381 1.05872 0.96099 0.94544 1.18506 0.93682 0.91536 0.83523 1.84761 1.44430 1.81122 1.18471 1.21355 1.01128 0.98642 0.93639 1.20453 0.96593 0.96206 0.94361 1.25186 0.86212 0.97299 1.09773 1.86537 1.17012 1.48737 1.81884 0.94754 0.80826 0.87495 0.77766 1.20931 1.00122 0.94209 0.99914 1.21154 0.97281 0.97433 0.92420 1.24015 0.99737 0.97754 0.98936 0.92123 0.90927 0.89424 0.91392 0.89924 0.91382 0.89446 0.90921 0.92130 0.75704 0.89619 0.87648 0.76377 0.74266 0.84181 0.86464 0.77215 1.18020 1.17744 0.84635 0.84789 0.88330 0.90148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.16 8.37 37.16 0.31 0.15 16 2 C 0.14 0.11 1.13 -90.62 -0.10 0.01 16 3 C -0.14 0.15 8.85 37.16 0.33 0.48 16 4 C -0.18 -0.13 8.37 37.16 0.31 0.18 16 5 O -0.37 -0.67 9.94 -40.30 -0.40 -1.07 16 6 C 0.65 1.28 8.06 54.06 0.44 1.71 16 7 O -0.57 -2.30 11.48 -19.28 -0.22 -2.52 16 8 N -0.70 0.76 5.36 -57.94 -0.31 0.45 16 9 C 0.14 -0.29 4.12 -67.12 -0.28 -0.57 16 10 H 0.12 -0.15 7.46 -51.93 -0.39 -0.54 16 11 C -0.15 0.55 7.58 -25.92 -0.20 0.36 16 12 C 0.13 -0.21 4.32 -67.11 -0.29 -0.50 16 13 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 14 N -0.71 0.95 5.21 -54.06 -0.28 0.67 16 15 C 0.56 1.03 7.76 -12.47 -0.10 0.94 16 16 O -0.51 -2.80 14.76 -16.59 -0.24 -3.05 16 17 C -0.17 -0.12 5.89 -104.85 -0.62 -0.73 16 18 C 0.17 0.28 6.72 -38.69 -0.26 0.02 16 19 O -0.48 -1.21 11.58 -40.52 -0.47 -1.68 16 20 C -0.13 -0.06 9.60 -39.47 -0.38 -0.44 16 21 C -0.08 0.07 5.35 -104.58 -0.56 -0.49 16 22 C -0.07 0.09 2.79 36.01 0.10 0.19 16 23 O -0.54 0.42 12.83 -35.23 -0.45 -0.03 16 24 Si 0.69 -1.51 29.78 -169.99 -5.06 -6.57 16 25 C -0.13 0.29 8.64 -39.63 -0.34 -0.06 16 26 C -0.06 0.12 9.54 -39.20 -0.37 -0.25 16 27 C -0.16 0.27 7.68 -25.92 -0.20 0.07 16 28 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 29 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.09 0.25 5.88 -51.93 -0.31 -0.05 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.08 -0.19 8.14 -51.92 -0.42 -0.61 16 33 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 34 H 0.09 0.23 5.88 -51.93 -0.31 -0.08 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 36 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.41 -1.24 8.83 -40.82 -0.36 -1.60 16 38 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.11 -0.49 8.12 -51.93 -0.42 -0.92 16 40 H 0.40 -1.50 6.73 -40.82 -0.27 -1.78 16 41 H 0.40 -0.46 9.06 45.56 0.41 -0.05 16 42 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 43 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 44 H 0.38 -1.82 8.70 45.56 0.40 -1.42 16 45 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 46 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 47 H 0.14 -0.59 4.88 -52.49 -0.26 -0.85 16 48 H 0.13 -0.65 6.40 -52.48 -0.34 -0.99 16 49 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 50 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 406.78 15.07 6.13 6.13 Total: 0.00 -10.84 406.78 -10.01 -20.85 By element: Atomic # 1 Polarization: -7.76 SS G_CDS: -6.49 Total: -14.25 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -2.21 Total: 1.08 kcal Atomic # 7 Polarization: 1.72 SS G_CDS: -0.59 Total: 1.12 kcal Atomic # 8 Polarization: -6.57 SS G_CDS: -1.79 Total: -8.36 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.06 Total: -6.57 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -10.84 -10.01 -20.85 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13422076.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.369 kcal (2) G-P(sol) polarization free energy of solvation -10.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.848 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds