Wall clock time and date at job start Sun Mar 7 2021 00:22:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52996 * 109.47676 * 2 1 4 4 C 1.53004 * 109.47353 * 239.99753 * 2 1 3 5 5 O 1.45208 * 109.46830 * 120.00081 * 2 1 3 6 6 C 1.34633 * 116.99886 * 60.00120 * 5 2 1 7 7 O 1.21507 * 120.00555 * 359.97438 * 6 5 2 8 8 N 1.34784 * 119.99596 * 179.97438 * 6 5 2 9 9 C 1.46494 * 119.99635 * 179.97438 * 8 6 5 10 10 H 1.08995 * 112.85546 * 23.80497 * 9 8 6 11 11 C 1.53782 * 113.61176 * 155.00482 * 9 8 6 12 12 C 1.53784 * 87.08486 * 139.97919 * 11 9 8 13 13 H 1.08992 * 113.61454 * 220.02021 * 12 11 9 14 14 N 1.46501 * 113.61282 * 89.11189 * 12 11 9 15 15 C 1.34780 * 119.99532 * 155.00519 * 14 12 11 16 16 O 1.21587 * 119.99950 * 359.97438 * 15 14 12 17 17 C 1.47533 * 119.99781 * 179.97438 * 15 14 12 18 18 C 1.40137 * 120.18971 * 179.72005 * 17 15 14 19 19 O 1.35648 * 120.15247 * 359.97438 * 18 17 15 20 20 C 1.38722 * 119.69530 * 179.77083 * 18 17 15 21 21 C 1.38048 * 120.08468 * 0.50578 * 20 18 17 22 22 C 1.50705 * 119.80379 * 179.76605 * 21 20 18 23 23 O 1.42894 * 109.47051 * 64.97996 * 22 21 20 24 24 Si 1.86294 * 109.47069 * 184.98110 * 22 21 20 25 25 C 1.38545 * 120.39135 * 359.74729 * 21 20 18 26 26 C 1.37791 * 120.30111 * 359.97438 * 25 21 20 27 27 C 1.53783 * 87.07811 * 334.56860 * 12 11 9 28 28 H 1.08998 * 109.47144 * 300.00036 * 1 2 3 29 29 H 1.08999 * 109.46619 * 60.00302 * 1 2 3 30 30 H 1.08996 * 109.46980 * 180.02562 * 1 2 3 31 31 H 1.08994 * 109.47596 * 180.02562 * 3 2 1 32 32 H 1.09009 * 109.46889 * 300.00117 * 3 2 1 33 33 H 1.09003 * 109.46990 * 59.99073 * 3 2 1 34 34 H 1.09005 * 109.46836 * 300.00480 * 4 2 1 35 35 H 1.08999 * 109.46845 * 60.00089 * 4 2 1 36 36 H 1.08994 * 109.47403 * 180.02562 * 4 2 1 37 37 H 0.96995 * 120.00015 * 359.72334 * 8 6 5 38 38 H 1.09001 * 113.61047 * 254.52498 * 11 9 8 39 39 H 1.08994 * 113.61763 * 25.34071 * 11 9 8 40 40 H 0.96997 * 120.00104 * 334.99700 * 14 12 11 41 41 H 0.96706 * 113.99411 * 90.00234 * 19 18 17 42 42 H 1.08001 * 119.95540 * 180.27332 * 20 18 17 43 43 H 1.09000 * 109.46740 * 304.97615 * 22 21 20 44 44 H 0.96694 * 114.00232 * 59.99958 * 23 22 21 45 45 H 1.48498 * 110.00295 * 58.67851 * 24 22 21 46 46 H 1.48504 * 109.99827 * 179.97438 * 24 22 21 47 47 H 1.08001 * 119.85141 * 179.97438 * 25 21 20 48 48 H 1.08004 * 120.04382 * 180.02562 * 26 25 21 49 49 H 1.09002 * 113.60736 * 270.88373 * 27 12 11 50 50 H 1.08997 * 113.61928 * 139.98604 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5041 8 7 2.0680 -2.6657 2.4167 9 6 1.6739 -4.0668 2.5832 10 1 1.4208 -4.5503 1.6397 11 6 2.6473 -4.8815 3.4513 12 6 1.4100 -5.5542 4.0689 13 1 1.4901 -5.7124 5.1443 14 7 0.9713 -6.7514 3.3474 15 6 0.2717 -7.7071 3.9906 16 8 0.0050 -7.5759 5.1696 17 6 -0.1706 -8.9126 3.2640 18 6 -0.8932 -9.9115 3.9301 19 8 -1.1892 -9.7751 5.2469 20 6 -1.3081 -11.0385 3.2357 21 6 -1.0007 -11.1788 1.8973 22 6 -1.4500 -12.4082 1.1504 23 8 -2.8775 -12.4343 1.0911 24 14 -0.7572 -12.3722 -0.5786 25 6 -0.2819 -10.1959 1.2364 26 6 0.1332 -9.0672 1.9091 27 6 0.6282 -4.2854 3.6894 28 1 -0.3633 0.5138 0.8900 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 3.1301 1.4424 -0.0005 32 1 1.6768 1.9563 -0.8901 33 1 1.6767 1.9563 0.8899 34 1 1.6767 -1.7490 -1.2492 35 1 1.6768 -0.2075 -2.1392 36 1 3.1300 -0.7217 -1.2490 37 1 2.6311 -2.2381 3.0807 38 1 3.2756 -5.5644 2.8793 39 1 3.2147 -4.2754 4.1574 40 1 1.1843 -6.8562 2.4070 41 1 -2.0308 -9.3302 5.4167 42 1 -1.8690 -11.8089 3.7439 43 1 -1.0914 -13.2984 1.6670 44 1 -3.2666 -11.6705 0.6436 45 1 0.7258 -12.3127 -0.5304 46 1 -1.1926 -13.5797 -1.3254 47 1 -0.0459 -10.3148 0.1892 48 1 0.6930 -8.3034 1.3898 49 1 0.6426 -3.5165 4.4619 50 1 -0.3735 -4.4868 3.3099 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_13422076.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:50 Heat of formation + Delta-G solvation = -133.534751 kcal Electronic energy + Delta-G solvation = -32886.992912 eV Core-core repulsion = 28268.236115 eV Total energy + Delta-G solvation = -4618.756798 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.176 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.02327 -41.65749 -40.67132 -39.39237 -38.43089 -37.86950 -37.14268 -35.56015 -34.85683 -33.65039 -32.27120 -31.11280 -28.35654 -28.29696 -27.69484 -26.79755 -25.93992 -23.91125 -23.73954 -23.04957 -21.89650 -21.19019 -20.59988 -19.50184 -19.11287 -18.76915 -18.18656 -17.84023 -17.31907 -17.17065 -16.84842 -16.66233 -16.35036 -16.21176 -15.94869 -15.77700 -15.63683 -15.38450 -15.25030 -14.97255 -14.65355 -14.51033 -14.31573 -13.90710 -13.84409 -13.56364 -13.35795 -13.21654 -13.15481 -13.10771 -12.93589 -12.89907 -12.85853 -12.53201 -12.30975 -12.28987 -12.20573 -11.94848 -11.75529 -11.60566 -11.38160 -11.11089 -10.98223 -10.49604 -10.30034 -10.14983 -10.00602 -9.78936 -4.98927 -0.43085 0.13717 1.18988 1.27956 1.63473 1.69814 1.74846 1.97216 1.99522 2.55642 3.10794 3.15388 3.34563 3.42675 3.48484 3.54521 3.67539 3.75039 3.77849 3.80238 3.84161 3.95318 3.96853 4.07564 4.26227 4.36461 4.43952 4.56407 4.58874 4.62358 4.66507 4.70733 4.75334 4.77424 4.77482 4.84012 4.86122 4.88380 4.94610 4.97242 5.01869 5.11950 5.13727 5.23533 5.25987 5.28161 5.36293 5.53486 5.58837 5.60683 6.39554 6.43326 6.70098 6.74379 7.12938 7.34808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.643 3.357 7 O -0.592 6.592 8 N -0.690 5.690 9 C 0.140 3.860 10 H 0.113 0.887 11 C -0.133 4.133 12 C 0.121 3.879 13 H 0.098 0.902 14 N -0.698 5.698 15 C 0.560 3.440 16 O -0.560 6.560 17 C -0.180 4.180 18 C 0.153 3.847 19 O -0.498 6.498 20 C -0.141 4.141 21 C -0.073 4.073 22 C -0.084 4.084 23 O -0.554 6.554 24 Si 0.788 3.212 25 C -0.130 4.130 26 C -0.053 4.053 27 C -0.162 4.162 28 H 0.059 0.941 29 H 0.086 0.914 30 H 0.065 0.935 31 H 0.069 0.931 32 H 0.097 0.903 33 H 0.068 0.932 34 H 0.066 0.934 35 H 0.085 0.915 36 H 0.062 0.938 37 H 0.418 0.582 38 H 0.099 0.901 39 H 0.122 0.878 40 H 0.414 0.586 41 H 0.408 0.592 42 H 0.133 0.867 43 H 0.108 0.892 44 H 0.397 0.603 45 H -0.278 1.278 46 H -0.303 1.303 47 H 0.165 0.835 48 H 0.168 0.832 49 H 0.103 0.897 50 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.318 4.761 -5.471 7.614 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.397 3.603 7 O -0.483 6.483 8 N -0.349 5.349 9 C 0.036 3.964 10 H 0.131 0.869 11 C -0.171 4.171 12 C 0.014 3.986 13 H 0.116 0.884 14 N -0.351 5.351 15 C 0.349 3.651 16 O -0.440 6.440 17 C -0.184 4.184 18 C 0.107 3.893 19 O -0.311 6.311 20 C -0.159 4.159 21 C -0.074 4.074 22 C -0.193 4.193 23 O -0.362 6.362 24 Si 0.693 3.307 25 C -0.147 4.147 26 C -0.072 4.072 27 C -0.202 4.202 28 H 0.078 0.922 29 H 0.105 0.895 30 H 0.084 0.916 31 H 0.088 0.912 32 H 0.116 0.884 33 H 0.087 0.913 34 H 0.085 0.915 35 H 0.104 0.896 36 H 0.081 0.919 37 H 0.255 0.745 38 H 0.117 0.883 39 H 0.140 0.860 40 H 0.252 0.748 41 H 0.267 0.733 42 H 0.151 0.849 43 H 0.125 0.875 44 H 0.248 0.752 45 H -0.205 1.205 46 H -0.231 1.231 47 H 0.182 0.818 48 H 0.185 0.815 49 H 0.121 0.879 50 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 2.905 3.474 -5.260 6.941 hybrid contribution -0.407 -0.089 0.825 0.924 sum 2.499 3.384 -4.435 6.113 Atomic orbital electron populations 1.22474 0.94123 1.03755 1.03391 1.22334 0.94372 0.92527 0.81620 1.21897 1.02472 0.91067 1.04158 1.22471 1.01640 1.02359 0.97186 1.86317 1.71532 1.23468 1.47255 1.18431 0.78637 0.80758 0.82511 1.90894 1.42092 1.70885 1.44405 1.44753 1.54741 1.12260 1.23137 1.22697 0.96054 0.78811 0.98830 0.86884 1.23733 0.95984 0.98325 0.99066 1.21629 0.95710 0.83487 0.97731 0.88388 1.45483 1.55832 1.19224 1.14548 1.18274 0.77802 0.82852 0.86214 1.90813 1.56800 1.79364 1.16976 1.20433 1.06580 0.95670 0.95705 1.18747 0.94733 0.92462 0.83339 1.84715 1.45342 1.81469 1.19606 1.21348 1.01823 0.98352 0.94427 1.20569 0.96406 0.96633 0.93769 1.25401 0.86268 0.96793 1.10835 1.86500 1.17269 1.50048 1.82407 0.93691 0.77733 0.84985 0.74315 1.21232 0.98975 0.93414 1.01103 1.21504 0.96360 0.98108 0.91201 1.23990 0.99040 0.97926 0.99235 0.92178 0.89533 0.91604 0.91153 0.88392 0.91333 0.91476 0.89579 0.91917 0.74460 0.88296 0.85995 0.74760 0.73251 0.84875 0.87500 0.75241 1.20469 1.23120 0.81841 0.81479 0.87904 0.91751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.35 8.37 71.98 0.60 0.25 16 2 C 0.13 0.18 1.13 -10.79 -0.01 0.17 16 3 C -0.14 0.43 8.85 71.98 0.64 1.07 16 4 C -0.18 -0.22 8.37 71.98 0.60 0.38 16 5 O -0.37 -1.36 9.94 -55.42 -0.55 -1.91 16 6 C 0.64 2.63 8.06 129.79 1.05 3.68 16 7 O -0.59 -5.23 11.48 19.82 0.23 -5.00 16 8 N -0.69 1.82 5.36 -567.61 -3.04 -1.22 16 9 C 0.14 -0.66 4.12 45.52 0.19 -0.47 16 10 H 0.11 -0.35 7.46 -2.39 -0.02 -0.37 16 11 C -0.13 1.14 7.58 31.12 0.24 1.37 16 12 C 0.12 -0.39 4.32 45.52 0.20 -0.19 16 13 H 0.10 0.08 7.46 -2.39 -0.02 0.06 16 14 N -0.70 1.92 5.21 -443.20 -2.31 -0.39 16 15 C 0.56 2.63 7.76 86.69 0.67 3.30 16 16 O -0.56 -7.36 14.76 16.93 0.25 -7.11 16 17 C -0.18 -0.36 5.89 -20.01 -0.12 -0.47 16 18 C 0.15 0.75 6.72 22.85 0.15 0.91 16 19 O -0.50 -3.90 11.58 -68.71 -0.80 -4.69 16 20 C -0.14 -0.32 9.60 22.34 0.21 -0.10 16 21 C -0.07 0.14 5.35 -19.83 -0.11 0.04 16 22 C -0.08 0.22 2.79 71.24 0.20 0.41 16 23 O -0.55 0.82 12.83 -148.98 -1.91 -1.09 16 24 Si 0.79 -4.13 29.78 68.60 2.04 -2.08 16 25 C -0.13 0.76 8.64 22.24 0.19 0.95 16 26 C -0.05 0.28 9.54 22.52 0.21 0.49 16 27 C -0.16 0.47 7.68 31.12 0.24 0.71 16 28 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 29 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 30 H 0.07 0.45 5.88 -2.39 -0.01 0.44 16 31 H 0.07 -0.24 8.14 -2.39 -0.02 -0.25 16 32 H 0.10 -0.61 8.14 -2.38 -0.02 -0.63 16 33 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 34 H 0.07 0.39 5.88 -2.38 -0.01 0.38 16 35 H 0.09 -0.17 8.14 -2.39 -0.02 -0.18 16 36 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 37 H 0.42 -2.93 8.83 -92.71 -0.82 -3.75 16 38 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 39 H 0.12 -1.39 8.12 -2.39 -0.02 -1.40 16 40 H 0.41 -3.62 6.73 -92.71 -0.62 -4.24 16 41 H 0.41 0.35 9.06 -74.05 -0.67 -0.33 16 42 H 0.13 0.37 8.06 -2.91 -0.02 0.34 16 43 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 44 H 0.40 -3.99 8.70 -74.06 -0.64 -4.63 16 45 H -0.28 0.36 7.11 99.48 0.71 1.07 16 46 H -0.30 -0.99 7.11 99.48 0.71 -0.29 16 47 H 0.16 -1.91 4.88 -2.91 -0.01 -1.92 16 48 H 0.17 -2.09 6.40 -2.91 -0.02 -2.11 16 49 H 0.10 -0.39 8.14 -2.39 -0.02 -0.41 16 50 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 Total: 0.00 -27.99 406.78 -2.63 -30.62 By element: Atomic # 1 Polarization: -17.91 SS G_CDS: -1.70 Total: -19.61 kcal Atomic # 6 Polarization: 7.34 SS G_CDS: 5.16 Total: 12.49 kcal Atomic # 7 Polarization: 3.74 SS G_CDS: -5.35 Total: -1.61 kcal Atomic # 8 Polarization: -17.03 SS G_CDS: -2.78 Total: -19.81 kcal Atomic # 14 Polarization: -4.13 SS G_CDS: 2.04 Total: -2.08 kcal Total: -27.99 -2.63 -30.62 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13422076.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.915 kcal (2) G-P(sol) polarization free energy of solvation -27.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.620 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds