Wall clock time and date at job start Sun Mar 7 2021 00:22:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37790 * 119.84704 * 2 1 4 4 C 1.39703 * 119.91020 * 180.02562 * 3 2 1 5 5 C 1.47533 * 120.19578 * 179.97438 * 4 3 2 6 6 O 1.21584 * 120.00458 * 179.97438 * 5 4 3 7 7 N 1.34780 * 119.99698 * 359.97438 * 5 4 3 8 8 C 1.46497 * 119.99982 * 179.97438 * 7 5 4 9 9 H 1.09002 * 112.84973 * 336.20029 * 8 7 5 10 10 C 1.53785 * 113.61441 * 107.49979 * 8 7 5 11 11 C 1.53777 * 87.07991 * 89.11589 * 10 8 7 12 12 H 1.08999 * 113.61895 * 270.88491 * 11 10 8 13 13 N 1.46503 * 113.61691 * 139.98273 * 11 10 8 14 14 C 1.34769 * 120.00095 * 107.50234 * 13 11 10 15 15 O 1.21515 * 120.00453 * 0.02562 * 14 13 11 16 16 O 1.34646 * 120.00029 * 180.02562 * 14 13 11 17 17 C 1.45200 * 116.99874 * 179.97438 * 16 14 13 18 18 C 1.53002 * 109.47028 * 60.00059 * 17 16 14 19 19 C 1.52998 * 109.46892 * 179.97438 * 17 16 14 20 20 C 1.52995 * 109.47104 * 299.99945 * 17 16 14 21 21 C 1.53781 * 87.08354 * 25.43356 * 11 10 8 22 22 C 1.40139 * 119.61489 * 359.97438 * 4 3 2 23 23 O 1.35652 * 120.14797 * 180.02562 * 22 4 3 24 24 C 1.38707 * 119.69843 * 0.02562 * 22 4 3 25 25 C 1.50706 * 119.95761 * 180.26030 * 24 22 4 26 26 O 1.42908 * 109.46870 * 284.72589 * 25 24 22 27 27 Si 1.86294 * 109.47389 * 164.72634 * 25 24 22 28 28 C 1.38055 * 120.08691 * 359.97438 * 24 22 4 29 29 H 1.08994 * 109.47378 * 269.97710 * 1 2 3 30 30 H 1.08997 * 109.46995 * 29.98730 * 1 2 3 31 31 H 1.09010 * 109.46561 * 149.98093 * 1 2 3 32 32 H 1.08000 * 120.04469 * 0.02562 * 3 2 1 33 33 H 0.97003 * 119.99710 * 359.97438 * 7 5 4 34 34 H 1.08997 * 113.61581 * 203.66776 * 10 8 7 35 35 H 1.09009 * 113.61327 * 334.57169 * 10 8 7 36 36 H 0.97006 * 119.99785 * 287.50584 * 13 11 10 37 37 H 1.09000 * 109.46970 * 59.99898 * 18 17 16 38 38 H 1.09007 * 109.46666 * 179.97438 * 18 17 16 39 39 H 1.08997 * 109.46809 * 299.99367 * 18 17 16 40 40 H 1.09002 * 109.47418 * 59.99698 * 19 17 16 41 41 H 1.08994 * 109.47622 * 179.97438 * 19 17 16 42 42 H 1.09000 * 109.47373 * 300.00265 * 19 17 16 43 43 H 1.08997 * 109.47712 * 60.00034 * 20 17 16 44 44 H 1.09007 * 109.46930 * 180.02562 * 20 17 16 45 45 H 1.09005 * 109.47109 * 299.99699 * 20 17 16 46 46 H 1.08993 * 113.61612 * 220.01868 * 21 11 10 47 47 H 1.09000 * 113.61327 * 89.11265 * 21 11 10 48 48 H 0.96701 * 113.99834 * 269.98882 * 23 22 4 49 49 H 1.09005 * 109.46839 * 44.72145 * 25 24 22 50 50 H 0.96699 * 113.99796 * 179.97438 * 26 25 24 51 51 H 1.48502 * 110.00096 * 59.99939 * 27 25 24 52 52 H 1.48503 * 109.99964 * 181.31690 * 27 25 24 53 53 H 1.08005 * 119.80325 * 179.97438 * 28 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1967 -0.0005 5 6 4.3304 2.4726 -0.0011 6 8 5.5463 2.4699 -0.0011 7 7 3.6592 3.6414 -0.0016 8 6 4.3945 4.9084 -0.0016 9 1 5.4017 4.8133 0.4041 10 6 4.3378 5.6536 -1.3457 11 6 3.0605 6.3335 -0.8252 12 1 2.1486 5.7805 -1.0503 13 7 2.9672 7.7532 -1.1746 14 6 2.0893 8.1600 -2.1127 15 8 1.3747 7.3494 -2.6684 16 8 2.0039 9.4647 -2.4343 17 6 1.0367 9.8305 -3.4536 18 6 -0.3659 9.4278 -2.9936 19 6 1.0835 11.3426 -3.6818 20 6 1.3728 9.1065 -4.7588 21 6 3.5990 6.0824 0.5932 22 6 4.2837 -0.0209 -0.0005 23 8 5.6402 -0.0320 -0.0005 24 6 3.5771 -1.2145 -0.0005 25 6 4.3174 -2.5272 0.0054 26 8 4.8547 -2.7769 -1.2950 27 14 3.1448 -3.8994 0.4667 28 6 2.1966 -1.2016 0.0000 29 1 -0.3634 -0.0004 1.0276 30 1 -0.3633 0.8901 -0.5136 31 1 -0.3633 -0.8899 -0.5142 32 1 1.6510 2.1294 0.0004 33 1 2.6891 3.6435 -0.0020 34 1 5.1683 6.3429 -1.4982 35 1 4.1668 4.9995 -2.2008 36 1 3.5374 8.4004 -0.7308 37 1 -0.6054 9.9435 -2.0637 38 1 -1.0921 9.7028 -3.7587 39 1 -0.3995 8.3505 -2.8308 40 1 2.0826 11.6300 -4.0092 41 1 0.3578 11.6172 -4.4472 42 1 0.8437 11.8580 -2.7517 43 1 1.3393 8.0293 -4.5960 44 1 0.6470 9.3815 -5.5242 45 1 2.3721 9.3935 -5.0865 46 1 2.8317 5.7745 1.3034 47 1 4.2276 6.8889 0.9708 48 1 6.0334 -0.0354 -0.8840 49 1 5.1291 -2.4833 0.7317 50 1 5.3458 -3.6070 -1.3650 51 1 2.0335 -3.9696 -0.5159 52 1 3.8697 -5.1948 0.5071 53 1 1.6511 -2.1337 -0.0004 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_13422088.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:22:53 Heat of formation + Delta-G solvation = -135.596229 kcal Electronic energy + Delta-G solvation = -35283.710933 eV Core-core repulsion = 30509.327125 eV Total energy + Delta-G solvation = -4774.383809 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.05774 -41.72037 -40.75785 -39.40292 -38.09390 -37.93545 -37.69231 -35.58791 -34.89207 -33.74801 -33.15123 -32.28832 -28.38047 -28.31371 -27.56885 -26.82866 -26.80428 -26.44350 -24.86247 -23.15251 -21.90693 -21.77709 -21.18396 -20.59815 -19.52969 -19.17542 -18.65227 -18.43290 -17.79867 -17.62910 -17.19472 -16.93290 -16.76629 -16.48736 -16.07239 -15.92899 -15.76592 -15.42595 -15.38817 -15.25063 -14.94899 -14.59769 -14.47829 -14.44639 -14.10141 -13.89225 -13.79345 -13.57146 -13.37444 -13.22283 -13.16214 -13.13805 -12.98568 -12.92261 -12.87710 -12.55998 -12.53696 -12.45747 -12.31106 -11.97484 -11.88560 -11.80088 -11.63432 -11.40302 -11.13346 -10.97107 -10.50238 -10.33371 -10.18814 -10.01659 -9.52071 -4.96304 -0.37257 0.04738 1.16541 1.23381 1.55259 1.66295 1.72403 1.86772 1.96940 2.49388 3.13195 3.15855 3.26589 3.32266 3.45524 3.52607 3.65396 3.73038 3.77870 3.80846 3.81582 3.93287 3.94046 4.09365 4.14370 4.29876 4.42028 4.50703 4.54300 4.59188 4.60019 4.64208 4.68927 4.75303 4.75410 4.80440 4.81901 4.83940 4.86411 4.88962 4.92269 4.94692 4.96857 5.10390 5.17149 5.21944 5.24096 5.25828 5.34055 5.40025 5.51424 5.58478 5.64966 6.37239 6.40833 6.51518 6.65672 7.10711 7.32676 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.094 4.094 3 C -0.061 4.061 4 C -0.180 4.180 5 C 0.562 3.438 6 O -0.559 6.559 7 N -0.699 5.699 8 C 0.121 3.879 9 H 0.100 0.900 10 C -0.163 4.163 11 C 0.140 3.860 12 H 0.111 0.889 13 N -0.689 5.689 14 C 0.643 3.357 15 O -0.593 6.593 16 O -0.370 6.370 17 C 0.127 3.873 18 C -0.179 4.179 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.130 4.130 22 C 0.163 3.837 23 O -0.490 6.490 24 C -0.117 4.117 25 C -0.088 4.088 26 O -0.557 6.557 27 Si 0.775 3.225 28 C -0.080 4.080 29 H 0.092 0.908 30 H 0.082 0.918 31 H 0.074 0.926 32 H 0.160 0.840 33 H 0.413 0.587 34 H 0.104 0.896 35 H 0.060 0.940 36 H 0.419 0.581 37 H 0.063 0.937 38 H 0.085 0.915 39 H 0.065 0.935 40 H 0.068 0.932 41 H 0.098 0.902 42 H 0.070 0.930 43 H 0.063 0.937 44 H 0.086 0.914 45 H 0.059 0.941 46 H 0.100 0.900 47 H 0.124 0.876 48 H 0.401 0.599 49 H 0.080 0.920 50 H 0.395 0.605 51 H -0.280 1.280 52 H -0.285 1.285 53 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.354 2.250 3.203 6.633 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.094 4.094 3 C -0.080 4.080 4 C -0.184 4.184 5 C 0.350 3.650 6 O -0.438 6.438 7 N -0.351 5.351 8 C 0.015 3.985 9 H 0.118 0.882 10 C -0.204 4.204 11 C 0.036 3.964 12 H 0.128 0.872 13 N -0.348 5.348 14 C 0.396 3.604 15 O -0.484 6.484 16 O -0.284 6.284 17 C 0.091 3.909 18 C -0.236 4.236 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.169 4.169 22 C 0.117 3.883 23 O -0.301 6.301 24 C -0.118 4.118 25 C -0.195 4.195 26 O -0.367 6.367 27 Si 0.678 3.322 28 C -0.098 4.098 29 H 0.110 0.890 30 H 0.100 0.900 31 H 0.093 0.907 32 H 0.178 0.822 33 H 0.251 0.749 34 H 0.123 0.877 35 H 0.079 0.921 36 H 0.256 0.744 37 H 0.082 0.918 38 H 0.104 0.896 39 H 0.084 0.916 40 H 0.087 0.913 41 H 0.116 0.884 42 H 0.089 0.911 43 H 0.082 0.918 44 H 0.105 0.895 45 H 0.078 0.922 46 H 0.118 0.882 47 H 0.142 0.858 48 H 0.260 0.740 49 H 0.098 0.902 50 H 0.245 0.755 51 H -0.207 1.207 52 H -0.212 1.212 53 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -5.577 1.779 3.120 6.633 hybrid contribution 1.280 -0.256 -1.468 1.965 sum -4.297 1.523 1.651 4.849 Atomic orbital electron populations 1.20921 0.87987 1.04239 1.04190 1.20103 0.98154 0.91679 0.99513 1.21422 0.91063 0.99784 0.95723 1.20385 0.94995 0.92571 1.10418 1.18229 0.86874 0.84195 0.75701 1.90804 1.14798 1.87821 1.50376 1.45490 1.10646 1.04292 1.74718 1.21647 0.97416 0.82393 0.97087 0.88219 1.24007 0.99094 0.99475 0.97785 1.22678 0.98634 0.78898 0.96189 0.87153 1.44735 1.40036 1.09940 1.40075 1.18441 0.80416 0.81358 0.80149 1.90899 1.46758 1.54759 1.56005 1.86318 1.60034 1.24736 1.57355 1.22338 0.86681 0.96699 0.85168 1.22468 0.95316 1.03224 1.02618 1.21891 1.03999 0.90014 1.03621 1.22473 1.02653 1.02003 0.96612 1.23728 1.00389 0.97388 0.95361 1.18494 0.83651 0.90741 0.95447 1.84636 1.15243 1.96064 1.34203 1.19745 0.94099 0.93535 1.04439 1.25034 1.04546 1.01986 0.87943 1.86505 1.74057 1.45920 1.30181 0.93917 0.77225 0.73480 0.87589 1.21362 0.92287 0.99692 0.96426 0.88965 0.89955 0.90702 0.82244 0.74918 0.87747 0.92142 0.74378 0.91824 0.89585 0.91606 0.91322 0.88385 0.91071 0.91766 0.89529 0.92163 0.88189 0.85766 0.73991 0.90173 0.75462 1.20712 1.21224 0.83306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.85 10.00 71.24 0.71 1.57 16 2 C -0.09 0.18 5.87 -19.90 -0.12 0.07 16 3 C -0.06 0.08 9.18 22.52 0.21 0.29 16 4 C -0.18 -0.93 5.89 -20.01 -0.12 -1.05 16 5 C 0.56 4.01 7.76 86.69 0.67 4.68 16 6 O -0.56 -8.47 14.76 16.94 0.25 -8.22 16 7 N -0.70 0.37 5.21 -443.20 -2.31 -1.94 16 8 C 0.12 -0.21 4.32 45.52 0.20 -0.01 16 9 H 0.10 0.20 7.46 -2.39 -0.02 0.18 16 10 C -0.16 0.19 7.68 31.12 0.24 0.43 16 11 C 0.14 -0.45 4.12 45.52 0.19 -0.26 16 12 H 0.11 -0.13 7.47 -2.39 -0.02 -0.15 16 13 N -0.69 1.08 5.36 -567.61 -3.04 -1.96 16 14 C 0.64 3.37 8.06 129.79 1.05 4.41 16 15 O -0.59 -6.12 11.48 19.79 0.23 -5.89 16 16 O -0.37 -1.66 9.94 -55.56 -0.55 -2.22 16 17 C 0.13 0.29 1.13 -10.80 -0.01 0.28 16 18 C -0.18 -0.38 8.37 71.98 0.60 0.23 16 19 C -0.14 0.35 8.85 71.98 0.64 0.98 16 20 C -0.18 -0.55 8.37 71.98 0.60 0.06 16 21 C -0.13 0.98 7.58 31.12 0.24 1.22 16 22 C 0.16 1.28 6.69 22.84 0.15 1.44 16 23 O -0.49 -5.10 10.91 -68.75 -0.75 -5.85 16 24 C -0.12 -0.52 5.30 -19.79 -0.10 -0.63 16 25 C -0.09 -0.18 2.37 71.24 0.17 -0.02 16 26 O -0.56 -2.05 12.86 -148.98 -1.92 -3.96 16 27 Si 0.77 -1.49 30.20 68.60 2.07 0.58 16 28 C -0.08 -0.04 8.30 22.30 0.19 0.14 16 29 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 30 H 0.08 -0.74 8.08 -2.39 -0.02 -0.76 16 31 H 0.07 -0.56 8.08 -2.38 -0.02 -0.58 16 32 H 0.16 -1.30 6.40 -2.91 -0.02 -1.31 16 33 H 0.41 -2.52 6.73 -92.71 -0.62 -3.14 16 34 H 0.10 -0.25 8.14 -2.39 -0.02 -0.27 16 35 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 36 H 0.42 -2.60 8.84 -92.70 -0.82 -3.42 16 37 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 38 H 0.09 -0.09 8.14 -2.38 -0.02 -0.11 16 39 H 0.07 0.46 5.88 -2.39 -0.01 0.45 16 40 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 41 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 42 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 43 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 44 H 0.09 -0.03 8.14 -2.38 -0.02 -0.05 16 45 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 46 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 47 H 0.12 -1.34 8.12 -2.39 -0.02 -1.36 16 48 H 0.40 2.57 9.06 -74.06 -0.67 1.90 16 49 H 0.08 0.15 7.82 -2.38 -0.02 0.13 16 50 H 0.39 -1.60 8.74 -74.06 -0.65 -2.25 16 51 H -0.28 -0.69 6.74 99.48 0.67 -0.02 16 52 H -0.29 -0.68 7.11 99.48 0.71 0.02 16 53 H 0.15 -0.42 4.87 -2.91 -0.01 -0.43 16 Total: 0.00 -26.46 427.40 -2.30 -28.76 By element: Atomic # 1 Polarization: -11.37 SS G_CDS: -1.77 Total: -13.14 kcal Atomic # 6 Polarization: 8.34 SS G_CDS: 5.49 Total: 13.83 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -5.35 Total: -3.90 kcal Atomic # 8 Polarization: -23.40 SS G_CDS: -2.74 Total: -26.14 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: 2.07 Total: 0.58 kcal Total: -26.46 -2.30 -28.76 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13422088.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.835 kcal (2) G-P(sol) polarization free energy of solvation -26.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.297 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.761 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.596 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds