Wall clock time and date at job start Sun Mar 7 2021 00:23:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52996 * 109.47326 * 2 1 4 4 C 1.53007 * 109.46962 * 239.99941 * 2 1 3 5 5 O 1.45205 * 109.47336 * 120.00223 * 2 1 3 6 6 C 1.34635 * 116.99995 * 59.99519 * 5 2 1 7 7 O 1.21520 * 119.99872 * 0.02562 * 6 5 2 8 8 N 1.34775 * 120.00027 * 180.02562 * 6 5 2 9 9 C 1.46498 * 120.00022 * 180.02562 * 8 6 5 10 10 H 1.09005 * 112.90821 * 23.74842 * 9 8 6 11 11 C 1.53779 * 113.61550 * 155.00193 * 9 8 6 12 12 C 1.53780 * 87.08077 * 89.11773 * 11 9 8 13 13 H 1.09000 * 113.61467 * 270.80463 * 12 11 9 14 14 N 1.46504 * 113.61528 * 139.98209 * 12 11 9 15 15 C 1.34777 * 119.99906 * 155.00136 * 14 12 11 16 16 O 1.21606 * 119.99997 * 359.97438 * 15 14 12 17 17 C 1.47380 * 119.99641 * 180.02562 * 15 14 12 18 18 C 1.36413 * 127.19324 * 0.02996 * 17 15 14 19 19 O 1.33652 * 108.39523 * 179.97438 * 18 17 15 20 20 C 1.34211 * 110.91253 * 359.97438 * 19 18 17 21 21 C 1.50701 * 125.44173 * 180.02562 * 20 19 18 22 22 O 1.42903 * 109.46878 * 245.01993 * 21 20 19 23 23 Si 1.86300 * 109.46948 * 5.02211 * 21 20 19 24 24 C 1.34179 * 109.12212 * 0.25977 * 20 19 18 25 25 C 1.53781 * 87.08165 * 25.43565 * 12 11 9 26 26 H 1.08999 * 109.46826 * 300.00006 * 1 2 3 27 27 H 1.09004 * 109.47227 * 59.99669 * 1 2 3 28 28 H 1.09001 * 109.47333 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47456 * 179.97438 * 3 2 1 30 30 H 1.09004 * 109.47238 * 300.00324 * 3 2 1 31 31 H 1.08999 * 109.47173 * 60.00206 * 3 2 1 32 32 H 1.08998 * 109.47179 * 299.99777 * 4 2 1 33 33 H 1.08997 * 109.46767 * 60.00516 * 4 2 1 34 34 H 1.09001 * 109.46816 * 179.97438 * 4 2 1 35 35 H 0.96994 * 119.99702 * 0.02562 * 8 6 5 36 36 H 1.09000 * 113.61503 * 334.57039 * 11 9 8 37 37 H 1.09000 * 113.61437 * 203.66699 * 11 9 8 38 38 H 0.96998 * 119.99467 * 335.00232 * 14 12 11 39 39 H 1.07996 * 125.80404 * 359.94725 * 18 17 15 40 40 H 1.09001 * 109.46927 * 125.01928 * 21 20 19 41 41 H 0.96695 * 113.99582 * 59.99825 * 22 21 20 42 42 H 1.48497 * 110.00010 * 58.68023 * 23 21 20 43 43 H 1.48495 * 109.99824 * 180.02562 * 23 21 20 44 44 H 1.08001 * 127.02427 * 179.69785 * 24 20 19 45 45 H 1.08995 * 113.61999 * 89.11558 * 25 12 11 46 46 H 1.09003 * 113.61425 * 220.02041 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9515 -2.5097 0.5035 8 7 2.0672 -2.6655 2.4171 9 6 1.6740 -4.0669 2.5831 10 1 1.4212 -4.5512 1.6398 11 6 2.6470 -4.8810 3.4522 12 6 1.8053 -4.4459 4.6634 13 1 2.1346 -3.5075 5.1096 14 7 1.6081 -5.5080 5.6530 15 6 1.3580 -5.1927 6.9393 16 8 1.2965 -4.0265 7.2785 17 6 1.1602 -6.2612 7.9349 18 6 1.1987 -7.6075 7.7183 19 8 0.9704 -8.2282 8.8797 20 6 0.7805 -7.3404 9.8681 21 6 0.4992 -7.6831 11.3085 22 8 -0.8117 -7.2339 11.6576 23 14 0.6056 -9.5286 11.5398 24 6 0.8760 -6.0989 9.3682 25 6 0.6272 -4.2864 3.6880 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6766 1.9563 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6767 -1.7490 -1.2493 33 1 1.6767 -0.2074 -2.1392 34 1 3.1300 -0.7209 -1.2495 35 1 2.6262 -2.2364 3.0836 36 1 3.6620 -4.4837 3.4605 37 1 2.6126 -5.9531 3.2590 38 1 1.6576 -6.4382 5.3824 39 1 1.3821 -8.0898 6.7696 40 1 1.2334 -7.1938 11.9484 41 1 -1.5171 -7.6291 11.1272 42 1 1.9542 -10.0125 11.1497 43 1 0.3295 -9.8796 12.9561 44 1 0.7675 -5.1701 9.9086 45 1 0.0405 -5.1959 3.5593 46 1 0.0115 -3.4090 3.8867 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_13456056.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:23:09 Heat of formation + Delta-G solvation = -98.692486 kcal Electronic energy + Delta-G solvation = -28952.951597 eV Core-core repulsion = 24619.469433 eV Total energy + Delta-G solvation = -4333.482164 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.76495 -41.92651 -41.04302 -39.57664 -38.07170 -37.77667 -35.47038 -34.90633 -34.03087 -33.16822 -31.71631 -28.31229 -28.27384 -27.04888 -26.97171 -26.26761 -24.47566 -23.38763 -22.32060 -21.28996 -20.97907 -20.63835 -19.34924 -19.22974 -17.97007 -17.70226 -17.51057 -17.39437 -17.22518 -16.99930 -16.57620 -16.22019 -15.96596 -15.69760 -15.47518 -15.32332 -14.95299 -14.78116 -14.34076 -14.22367 -14.01806 -13.99763 -13.72875 -13.67508 -13.43647 -13.23288 -13.08866 -12.90204 -12.84228 -12.81216 -12.45039 -12.24622 -12.17742 -12.04794 -11.77455 -11.28738 -11.08373 -10.97176 -10.91307 -10.68844 -10.31133 -10.10450 -9.85459 -5.10367 0.17904 0.85761 1.08106 1.14322 1.42366 1.72514 1.85950 1.87322 2.00446 2.28226 3.07118 3.14679 3.18634 3.33041 3.37222 3.53226 3.69264 3.79029 3.82494 3.84875 3.87008 3.98590 4.20287 4.29737 4.38863 4.44419 4.47993 4.54109 4.58151 4.64198 4.64627 4.70561 4.76061 4.79794 4.83683 4.88581 4.92370 4.94633 5.10273 5.17241 5.23549 5.37538 5.38298 5.48419 5.60708 5.78650 6.34224 6.35678 6.39057 7.14112 7.41258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.142 3.858 10 H 0.116 0.884 11 C -0.152 4.152 12 C 0.123 3.877 13 H 0.118 0.882 14 N -0.718 5.718 15 C 0.589 3.411 16 O -0.530 6.530 17 C -0.239 4.239 18 C 0.032 3.968 19 O -0.165 6.165 20 C -0.058 4.058 21 C -0.029 4.029 22 O -0.530 6.530 23 Si 0.707 3.293 24 C -0.123 4.123 25 C -0.165 4.165 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.408 0.592 36 H 0.086 0.914 37 H 0.106 0.894 38 H 0.400 0.600 39 H 0.214 0.786 40 H 0.134 0.866 41 H 0.384 0.616 42 H -0.254 1.254 43 H -0.247 1.247 44 H 0.162 0.838 45 H 0.099 0.901 46 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.602 -4.482 -2.199 5.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.036 3.964 10 H 0.134 0.866 11 C -0.191 4.191 12 C 0.018 3.982 13 H 0.136 0.864 14 N -0.369 5.369 15 C 0.377 3.623 16 O -0.406 6.406 17 C -0.243 4.243 18 C -0.038 4.038 19 O -0.061 6.061 20 C -0.106 4.106 21 C -0.139 4.139 22 O -0.335 6.335 23 Si 0.606 3.394 24 C -0.143 4.143 25 C -0.205 4.205 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.243 0.757 36 H 0.104 0.896 37 H 0.124 0.876 38 H 0.234 0.766 39 H 0.231 0.769 40 H 0.151 0.849 41 H 0.232 0.768 42 H -0.178 1.178 43 H -0.171 1.171 44 H 0.179 0.821 45 H 0.118 0.882 46 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.934 -4.424 -1.508 4.766 hybrid contribution 0.557 0.610 -0.091 0.832 sum 1.491 -3.813 -1.599 4.396 Atomic orbital electron populations 1.22524 0.93802 1.05061 1.02759 1.22136 0.94484 0.91572 0.81795 1.21881 1.02341 0.92331 1.03376 1.22524 1.01607 1.03433 0.96540 1.86313 1.71434 1.23303 1.46790 1.18044 0.78582 0.80680 0.81920 1.90921 1.40766 1.70383 1.43221 1.44356 1.55581 1.11728 1.23830 1.21581 0.95500 0.79673 0.99605 0.86628 1.23790 0.99517 1.01597 0.94198 1.22668 0.96437 0.92446 0.86612 0.86430 1.45780 1.73439 1.09847 1.07849 1.17309 0.75872 0.87764 0.81358 1.90822 1.50265 1.19716 1.79835 1.21527 1.14003 0.93241 0.95543 1.24469 0.99273 0.91179 0.88900 1.83683 1.68836 1.37658 1.15942 1.22744 1.08588 0.87863 0.91420 1.24473 0.88340 1.13847 0.87272 1.86581 1.13978 1.71402 1.61576 0.94247 0.86724 0.74740 0.83646 1.22552 1.01688 0.98174 0.91901 1.24015 0.97599 1.03776 0.95117 0.92079 0.90908 0.89421 0.91381 0.89902 0.91362 0.89424 0.90911 0.92109 0.75691 0.89556 0.87612 0.76573 0.76935 0.84922 0.76802 1.17780 1.17117 0.82062 0.88242 0.90142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 2 C 0.14 0.20 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.07 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.23 8.37 37.16 0.31 0.08 16 5 O -0.36 -0.93 9.94 -40.31 -0.40 -1.33 16 6 C 0.65 1.76 8.06 54.05 0.44 2.19 16 7 O -0.56 -2.72 11.48 -19.29 -0.22 -2.94 16 8 N -0.70 0.18 5.27 -57.93 -0.31 -0.13 16 9 C 0.14 -0.24 4.32 -67.12 -0.29 -0.53 16 10 H 0.12 -0.08 7.47 -51.93 -0.39 -0.47 16 11 C -0.15 0.59 7.58 -25.92 -0.20 0.39 16 12 C 0.12 -0.22 4.12 -67.12 -0.28 -0.50 16 13 H 0.12 0.00 7.46 -51.93 -0.39 -0.39 16 14 N -0.72 1.42 5.35 -54.10 -0.29 1.13 16 15 C 0.59 1.10 7.81 -12.54 -0.10 1.01 16 16 O -0.53 -3.33 16.58 5.27 0.09 -3.25 16 17 C -0.24 -0.15 6.31 -103.28 -0.65 -0.80 16 18 C 0.03 -0.08 11.61 30.07 0.35 0.27 16 19 O -0.17 0.17 8.90 7.66 0.07 0.24 16 20 C -0.06 0.00 6.18 -35.74 -0.22 -0.22 16 21 C -0.03 0.03 2.97 36.01 0.11 0.14 16 22 O -0.53 0.31 12.88 -35.23 -0.45 -0.14 16 23 Si 0.71 -1.29 32.09 -169.99 -5.46 -6.75 16 24 C -0.12 -0.20 10.90 -37.45 -0.41 -0.61 16 25 C -0.16 0.25 7.68 -25.92 -0.20 0.05 16 26 H 0.06 0.09 8.14 -51.93 -0.42 -0.34 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 28 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 30 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 35 H 0.41 -0.74 8.81 -40.82 -0.36 -1.10 16 36 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 37 H 0.11 -0.59 8.12 -51.93 -0.42 -1.02 16 38 H 0.40 -2.14 7.70 -40.82 -0.31 -2.45 16 39 H 0.21 -1.55 7.47 -52.49 -0.39 -1.94 16 40 H 0.13 -0.16 7.96 -51.93 -0.41 -0.57 16 41 H 0.38 -1.73 8.70 45.56 0.40 -1.34 16 42 H -0.25 -0.25 7.11 56.52 0.40 0.16 16 43 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 44 H 0.16 0.36 8.06 -52.49 -0.42 -0.06 16 45 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 46 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 LS Contribution 385.90 15.07 5.82 5.82 Total: 0.00 -10.73 385.90 -8.49 -19.22 By element: Atomic # 1 Polarization: -7.15 SS G_CDS: -6.74 Total: -13.89 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -0.60 Total: 2.01 kcal Atomic # 7 Polarization: 1.60 SS G_CDS: -0.59 Total: 1.00 kcal Atomic # 8 Polarization: -6.49 SS G_CDS: -0.92 Total: -7.41 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.46 Total: -6.75 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -10.73 -8.49 -19.22 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_13456056.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.472 kcal (2) G-P(sol) polarization free energy of solvation -10.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.221 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds