Wall clock time and date at job start Sun Mar 7 2021 00:23:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53006 * 109.47261 * 2 1 4 4 C 1.53000 * 109.47357 * 239.99742 * 2 1 3 5 5 O 1.45198 * 109.47271 * 119.99722 * 2 1 3 6 6 C 1.34639 * 116.99818 * 60.00143 * 5 2 1 7 7 O 1.21515 * 120.00099 * 359.97438 * 6 5 2 8 8 N 1.34771 * 120.00282 * 180.02562 * 6 5 2 9 9 C 1.46503 * 120.00598 * 179.97438 * 8 6 5 10 10 H 1.09006 * 112.84679 * 23.79660 * 9 8 6 11 11 C 1.53775 * 113.61945 * 154.99965 * 9 8 6 12 12 C 1.53778 * 87.08325 * 89.11448 * 11 9 8 13 13 H 1.09001 * 113.61475 * 270.80305 * 12 11 9 14 14 N 1.46503 * 113.61215 * 139.98035 * 12 11 9 15 15 C 1.34783 * 119.99846 * 156.53217 * 14 12 11 16 16 O 1.21278 * 119.99828 * 359.97438 * 15 14 12 17 17 C 1.50699 * 119.99974 * 180.02562 * 15 14 12 18 18 C 1.50696 * 109.47061 * 180.02562 * 17 15 14 19 19 C 1.34847 * 125.89295 * 85.01761 * 18 17 15 20 20 C 1.40896 * 107.41771 * 179.74847 * 19 18 17 21 21 C 1.34849 * 107.41486 * 0.22942 * 20 19 18 22 22 C 1.50698 * 125.88991 * 180.02562 * 21 20 19 23 23 O 1.42902 * 109.47460 * 244.97464 * 22 21 20 24 24 Si 1.86305 * 109.47129 * 4.97923 * 22 21 20 25 25 N 1.36338 * 108.22198 * 359.97438 * 21 20 19 26 26 C 1.53783 * 87.17183 * 25.39339 * 12 11 9 27 27 H 1.08996 * 109.47694 * 300.00460 * 1 2 3 28 28 H 1.09001 * 109.47008 * 60.00054 * 1 2 3 29 29 H 1.08998 * 109.47265 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47155 * 180.02562 * 3 2 1 31 31 H 1.09001 * 109.47065 * 299.99911 * 3 2 1 32 32 H 1.08997 * 109.46806 * 59.99903 * 3 2 1 33 33 H 1.08995 * 109.47406 * 299.99989 * 4 2 1 34 34 H 1.09001 * 109.46896 * 60.00134 * 4 2 1 35 35 H 1.08999 * 109.47533 * 180.02562 * 4 2 1 36 36 H 0.97006 * 120.00174 * 359.97438 * 8 6 5 37 37 H 1.09008 * 113.61140 * 334.56760 * 11 9 8 38 38 H 1.08997 * 113.68959 * 203.68137 * 11 9 8 39 39 H 0.96998 * 120.00244 * 336.53384 * 14 12 11 40 40 H 1.08996 * 109.46985 * 59.99253 * 17 15 14 41 41 H 1.09001 * 109.46402 * 299.99889 * 17 15 14 42 42 H 1.08002 * 126.29438 * 0.02562 * 19 18 17 43 43 H 1.07997 * 126.29283 * 180.25032 * 20 19 18 44 44 H 1.09005 * 109.47334 * 124.97526 * 22 21 20 45 45 H 0.96709 * 113.99639 * 59.99944 * 23 22 21 46 46 H 1.48495 * 109.99784 * 179.97438 * 24 22 21 47 47 H 1.48502 * 109.99655 * 301.31790 * 24 22 21 48 48 H 0.96999 * 125.64118 * 179.97438 * 25 21 20 49 49 H 1.08997 * 113.61887 * 89.15496 * 26 12 11 50 50 H 1.09003 * 113.61436 * 220.06385 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9508 -2.5094 0.5040 8 7 2.0672 -2.6654 2.4171 9 6 1.6731 -4.0665 2.5837 10 1 1.4207 -4.5503 1.6401 11 6 2.6459 -4.8810 3.4527 12 6 1.8051 -4.4449 4.6642 13 1 2.1353 -3.5066 5.1099 14 7 1.6077 -5.5067 5.6541 15 6 1.3279 -5.1910 6.9342 16 8 1.2400 -4.0279 7.2666 17 6 1.1254 -6.2831 7.9527 18 6 0.8269 -5.6683 9.2958 19 6 -0.3866 -5.2755 9.7333 20 6 -0.2202 -4.7645 11.0358 21 6 1.0895 -4.8599 11.3425 22 6 1.7266 -4.4317 12.6393 23 8 2.6260 -3.3488 12.3936 24 14 0.4030 -3.8819 13.8297 25 7 1.7377 -5.4116 10.2775 26 6 0.6255 -4.2831 3.6909 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6767 1.9564 -0.8900 32 1 1.6766 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2492 34 1 1.6767 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2490 36 1 2.6268 -2.2365 3.0834 37 1 3.6612 -4.4844 3.4604 38 1 2.6119 -5.9534 3.2607 39 1 1.6783 -6.4369 5.3884 40 1 2.0298 -6.8874 8.0221 41 1 0.2898 -6.9133 7.6482 42 1 -1.3161 -5.3444 9.1876 43 1 -0.9985 -4.3693 11.6717 44 1 2.2757 -5.2698 13.0685 45 1 2.2049 -2.5669 12.0107 46 1 1.0184 -3.4577 15.1128 47 1 -0.3736 -2.7603 13.2429 48 1 2.6891 -5.5937 10.2273 49 1 0.0368 -5.1915 3.5633 50 1 0.0120 -3.4045 3.8907 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_14644196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:23:14 Heat of formation + Delta-G solvation = -76.481580 kcal Electronic energy + Delta-G solvation = -30881.888944 eV Core-core repulsion = 26491.550960 eV Total energy + Delta-G solvation = -4390.337984 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.31268 -41.90941 -41.03524 -39.64709 -37.83230 -37.70925 -35.44917 -34.84992 -33.55001 -32.73198 -31.86257 -29.44616 -28.31901 -28.27988 -26.97291 -26.19148 -24.91120 -23.54572 -22.02050 -21.30068 -21.13600 -21.01447 -20.65691 -19.24716 -18.96100 -18.16043 -17.80708 -17.39781 -17.06248 -16.79652 -16.59105 -16.34181 -16.29419 -15.57902 -15.38767 -15.28974 -15.16220 -14.79043 -14.56154 -14.37554 -14.22104 -14.15530 -13.95771 -13.80386 -13.72634 -13.53222 -13.42046 -13.17222 -13.09671 -12.85275 -12.83093 -12.81899 -12.44478 -12.25169 -12.10967 -12.02957 -11.77157 -11.72953 -11.29376 -10.97881 -10.90956 -10.74911 -10.30211 -10.06860 -9.71846 -8.91454 -4.87618 1.13182 1.13863 1.31383 1.57434 1.71237 1.85609 1.88494 1.99769 2.27505 2.50203 3.06825 3.17892 3.33698 3.39978 3.60369 3.69036 3.78382 3.82329 3.84302 3.84735 3.91870 3.97975 3.99660 4.32675 4.37357 4.44781 4.45256 4.47564 4.57484 4.59467 4.64081 4.65175 4.71493 4.79163 4.82784 4.83434 4.89031 4.91981 4.94063 5.09679 5.24452 5.31998 5.35732 5.37217 5.39297 5.48312 5.60074 6.04585 6.19430 6.35979 6.39018 6.41583 6.65750 7.17033 7.40692 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.141 3.859 10 H 0.115 0.885 11 C -0.152 4.152 12 C 0.123 3.877 13 H 0.114 0.886 14 N -0.723 5.723 15 C 0.512 3.488 16 O -0.522 6.522 17 C -0.072 4.072 18 C 0.036 3.964 19 C -0.172 4.172 20 C -0.187 4.187 21 C -0.008 4.008 22 C -0.055 4.055 23 O -0.537 6.537 24 Si 0.715 3.285 25 N -0.535 5.535 26 C -0.164 4.164 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.084 0.916 38 H 0.106 0.894 39 H 0.403 0.597 40 H 0.100 0.900 41 H 0.118 0.882 42 H 0.136 0.864 43 H 0.141 0.859 44 H 0.114 0.886 45 H 0.380 0.620 46 H -0.258 1.258 47 H -0.257 1.257 48 H 0.412 0.588 49 H 0.099 0.901 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.807 -4.867 -0.880 5.012 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.036 3.964 10 H 0.133 0.867 11 C -0.191 4.191 12 C 0.018 3.982 13 H 0.132 0.868 14 N -0.375 5.375 15 C 0.297 3.703 16 O -0.397 6.397 17 C -0.113 4.113 18 C -0.078 4.078 19 C -0.197 4.197 20 C -0.212 4.212 21 C -0.121 4.121 22 C -0.165 4.165 23 O -0.344 6.344 24 Si 0.614 3.386 25 N -0.130 5.130 26 C -0.204 4.204 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.243 0.757 37 H 0.103 0.897 38 H 0.124 0.876 39 H 0.237 0.763 40 H 0.118 0.882 41 H 0.136 0.864 42 H 0.154 0.846 43 H 0.159 0.841 44 H 0.132 0.868 45 H 0.228 0.772 46 H -0.183 1.183 47 H -0.182 1.182 48 H 0.249 0.751 49 H 0.117 0.883 50 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 0.660 -3.974 -0.380 4.046 hybrid contribution 1.201 0.495 -0.760 1.505 sum 1.862 -3.479 -1.140 4.107 Atomic orbital electron populations 1.22522 0.93798 1.05069 1.02760 1.22134 0.94489 0.91568 0.81792 1.21883 1.02335 0.92336 1.03377 1.22522 1.01604 1.03435 0.96546 1.86312 1.71457 1.23307 1.46796 1.18042 0.78594 0.80675 0.81920 1.90920 1.40720 1.70383 1.43251 1.44364 1.55537 1.11783 1.23818 1.21631 0.95533 0.79634 0.99603 0.86679 1.23773 0.99401 1.01588 0.94328 1.22612 0.96317 0.92522 0.86784 0.86812 1.45968 1.73002 1.09912 1.08650 1.20671 0.76184 0.90614 0.82785 1.90770 1.48863 1.20441 1.79583 1.20145 1.05084 0.96721 0.89362 1.19480 0.89694 1.07853 0.90756 1.20591 0.96637 1.06100 0.96383 1.20677 0.94518 1.08229 0.97745 1.20778 0.92901 1.06858 0.91611 1.24771 1.01863 0.92420 0.97423 1.86567 1.36830 1.26035 1.84924 0.94406 0.79648 0.87235 0.77285 1.41796 1.09615 1.48864 1.12747 1.24029 0.97576 1.03692 0.95153 0.92086 0.90898 0.89415 0.91388 0.89895 0.91366 0.89432 0.90892 0.92112 0.75749 0.89715 0.87599 0.76268 0.88166 0.86381 0.84591 0.84139 0.86837 0.77219 1.18326 1.18155 0.75139 0.88270 0.90249 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.30 8.37 37.15 0.31 0.01 16 2 C 0.14 0.21 1.13 -90.62 -0.10 0.11 16 3 C -0.14 0.06 8.85 37.16 0.33 0.38 16 4 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 5 O -0.36 -0.99 9.94 -40.32 -0.40 -1.39 16 6 C 0.65 1.88 8.06 54.05 0.44 2.31 16 7 O -0.56 -2.82 11.48 -19.28 -0.22 -3.04 16 8 N -0.70 0.04 5.26 -57.84 -0.30 -0.26 16 9 C 0.14 -0.21 4.33 -67.03 -0.29 -0.50 16 10 H 0.12 -0.05 7.46 -51.93 -0.39 -0.44 16 11 C -0.15 0.57 7.58 -25.92 -0.20 0.37 16 12 C 0.12 -0.24 4.09 -67.12 -0.27 -0.51 16 13 H 0.11 0.00 7.50 -51.93 -0.39 -0.39 16 14 N -0.72 1.95 5.36 -53.01 -0.28 1.66 16 15 C 0.51 0.11 7.82 -10.98 -0.09 0.02 16 16 O -0.52 -2.68 15.65 5.56 0.09 -2.59 16 17 C -0.07 0.16 6.24 -29.04 -0.18 -0.02 16 18 C 0.04 0.04 5.66 -81.79 -0.46 -0.43 16 19 C -0.17 -0.37 10.76 -39.78 -0.43 -0.80 16 20 C -0.19 -0.36 9.37 -39.78 -0.37 -0.74 16 21 C -0.01 -0.01 6.50 -81.79 -0.53 -0.54 16 22 C -0.06 -0.03 3.08 36.00 0.11 0.08 16 23 O -0.54 -1.16 12.88 -35.23 -0.45 -1.62 16 24 Si 0.71 -0.27 30.60 -169.99 -5.20 -5.47 16 25 N -0.54 -0.51 6.07 -5.44 -0.03 -0.55 16 26 C -0.16 0.23 7.69 -25.82 -0.20 0.03 16 27 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 33 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -0.65 8.81 -40.82 -0.36 -1.01 16 37 H 0.08 -0.32 8.14 -51.92 -0.42 -0.74 16 38 H 0.11 -0.57 8.11 -51.93 -0.42 -0.99 16 39 H 0.40 -2.31 8.71 -40.82 -0.36 -2.66 16 40 H 0.10 -0.46 8.14 -51.93 -0.42 -0.89 16 41 H 0.12 -0.52 8.14 -51.93 -0.42 -0.94 16 42 H 0.14 0.15 8.06 -52.49 -0.42 -0.28 16 43 H 0.14 0.07 6.24 -52.49 -0.33 -0.26 16 44 H 0.11 -0.08 7.96 -51.93 -0.41 -0.49 16 45 H 0.38 0.04 8.70 45.56 0.40 0.44 16 46 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 47 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 48 H 0.41 -0.29 8.96 -40.82 -0.37 -0.66 16 49 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 50 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 LS Contribution 409.35 15.07 6.17 6.17 Total: 0.00 -10.73 409.35 -10.20 -20.93 By element: Atomic # 1 Polarization: -5.76 SS G_CDS: -7.93 Total: -13.69 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -1.63 Total: -0.15 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -0.62 Total: 0.85 kcal Atomic # 8 Polarization: -7.65 SS G_CDS: -0.99 Total: -8.64 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.20 Total: -5.47 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.73 -10.20 -20.93 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_14644196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.555 kcal (2) G-P(sol) polarization free energy of solvation -10.728 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.283 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.198 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.927 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.482 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds