Wall clock time and date at job start Sun Mar 7 2021 00:23:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52997 * 109.47416 * 2 1 4 4 C 1.53004 * 109.47250 * 239.99369 * 2 1 3 5 5 O 1.45207 * 109.46819 * 119.99999 * 2 1 3 6 6 C 1.34631 * 116.99837 * 59.99855 * 5 2 1 7 7 O 1.21509 * 120.00325 * 0.02562 * 6 5 2 8 8 N 1.34777 * 119.99914 * 180.02562 * 6 5 2 9 9 C 1.46498 * 120.00269 * 180.02562 * 8 6 5 10 10 H 1.09001 * 112.91006 * 336.25250 * 9 8 6 11 11 C 1.53786 * 113.61573 * 107.50085 * 9 8 6 12 12 C 1.53777 * 87.08098 * 139.98291 * 11 9 8 13 13 H 1.09004 * 113.68899 * 220.00606 * 12 11 9 14 14 N 1.46498 * 113.61780 * 89.11922 * 12 11 9 15 15 C 1.34775 * 120.00241 * 107.49536 * 14 12 11 16 16 O 1.21276 * 120.00123 * 0.02562 * 15 14 12 17 17 C 1.50703 * 119.99840 * 179.97438 * 15 14 12 18 18 O 1.42898 * 109.46925 * 180.02562 * 17 15 14 19 19 C 1.35907 * 117.00185 * 180.02562 * 18 17 15 20 20 C 1.38703 * 120.05662 * 180.02562 * 19 18 17 21 21 C 1.50701 * 120.02906 * 0.02562 * 20 19 18 22 22 O 1.42896 * 109.47417 * 74.72140 * 21 20 19 23 23 Si 1.86301 * 109.47149 * 194.72157 * 21 20 19 24 24 C 1.38165 * 119.94234 * 179.72564 * 20 19 18 25 25 C 1.38241 * 120.05473 * 0.27683 * 24 20 19 26 26 C 1.38288 * 120.11322 * 359.97438 * 25 24 20 27 27 C 1.38121 * 120.05270 * 0.02562 * 26 25 24 28 28 C 1.53782 * 87.08381 * 334.56540 * 12 11 9 29 29 H 1.08997 * 109.47211 * 300.00503 * 1 2 3 30 30 H 1.09007 * 109.46730 * 60.00195 * 1 2 3 31 31 H 1.08996 * 109.47616 * 179.97438 * 1 2 3 32 32 H 1.08999 * 109.47148 * 179.97438 * 3 2 1 33 33 H 1.09001 * 109.47386 * 299.99793 * 3 2 1 34 34 H 1.09007 * 109.46952 * 59.99859 * 3 2 1 35 35 H 1.08991 * 109.47189 * 300.00615 * 4 2 1 36 36 H 1.09001 * 109.46579 * 60.00802 * 4 2 1 37 37 H 1.09005 * 109.47062 * 180.02562 * 4 2 1 38 38 H 0.97008 * 119.99777 * 359.97438 * 8 6 5 39 39 H 1.09002 * 113.61171 * 25.43325 * 11 9 8 40 40 H 1.09004 * 113.61398 * 254.53090 * 11 9 8 41 41 H 0.97008 * 119.99963 * 287.50294 * 14 12 11 42 42 H 1.09004 * 109.46808 * 60.00775 * 17 15 14 43 43 H 1.09001 * 109.47478 * 300.00676 * 17 15 14 44 44 H 1.09002 * 109.47060 * 314.72167 * 21 20 19 45 45 H 0.96703 * 114.00193 * 300.00261 * 22 21 20 46 46 H 1.48504 * 110.00019 * 298.68117 * 23 21 20 47 47 H 1.48503 * 110.00152 * 59.99805 * 23 21 20 48 48 H 1.08000 * 119.97314 * 180.25954 * 24 20 19 49 49 H 1.08007 * 119.94128 * 179.97438 * 25 24 20 50 50 H 1.08000 * 119.96611 * 179.97438 * 26 25 24 51 51 H 1.07999 * 120.02112 * 179.97438 * 27 26 25 52 52 H 1.09002 * 113.61451 * 139.97725 * 28 12 11 53 53 H 1.08997 * 113.61907 * 270.80157 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6521 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5036 8 7 2.0669 -2.6654 2.4172 9 6 1.6737 -4.0668 2.5832 10 1 0.7604 -4.3180 2.0439 11 6 2.8225 -5.0613 2.3458 12 6 2.2735 -5.8595 3.5400 13 1 3.0492 -6.2649 4.1897 14 7 1.2663 -6.8558 3.1668 15 6 1.5740 -8.1677 3.1930 16 8 2.6846 -8.5235 3.5260 17 6 0.5377 -9.1925 2.8096 18 8 1.1001 -10.5018 2.9171 19 6 0.2914 -11.5483 2.6040 20 6 0.7721 -12.8467 2.6868 21 6 2.1919 -13.0988 3.1247 22 8 2.2987 -12.8956 4.5351 23 14 2.6670 -14.8523 2.7122 24 6 -0.0537 -13.9091 2.3735 25 6 -1.3564 -13.6785 1.9722 26 6 -1.8364 -12.3847 1.8839 27 6 -1.0148 -11.3192 2.1960 28 6 1.6738 -4.5374 4.0473 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3634 -1.0276 -0.0005 32 1 3.1300 1.4424 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6766 1.9563 0.8900 35 1 1.6766 -1.7490 -1.2491 36 1 1.6767 -0.2075 -2.1392 37 1 3.1300 -0.7218 -1.2489 38 1 2.6266 -2.2365 3.0835 39 1 3.8109 -4.6367 2.5218 40 1 2.7515 -5.5918 1.3962 41 1 0.3779 -6.5712 2.9006 42 1 0.2166 -9.0178 1.7826 43 1 -0.3197 -9.1097 3.4774 44 1 2.8595 -12.4100 2.6069 45 1 2.0658 -12.0022 4.8226 46 1 1.7844 -15.8016 3.4370 47 1 2.5602 -15.0764 1.2480 48 1 0.3188 -14.9205 2.4418 49 1 -2.0003 -14.5104 1.7273 50 1 -2.8544 -12.2072 1.5697 51 1 -1.3901 -10.3089 2.1265 52 1 0.6754 -4.6451 4.4713 53 1 2.3476 -3.9704 4.6896 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_2989392.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:23:26 Heat of formation + Delta-G solvation = -126.527798 kcal Electronic energy + Delta-G solvation = -34559.061001 eV Core-core repulsion = 29785.070429 eV Total energy + Delta-G solvation = -4773.990572 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.02843 -41.73495 -41.10263 -39.77887 -38.52686 -37.91383 -37.51009 -35.61269 -34.89272 -33.46966 -32.82444 -31.37959 -29.50073 -28.38987 -28.32367 -26.82733 -26.71253 -25.98827 -23.92124 -23.14355 -22.70517 -22.03516 -21.23238 -20.62274 -19.53242 -19.22654 -18.49976 -18.29211 -17.89530 -17.54800 -17.39199 -17.20064 -16.87252 -16.71232 -16.56181 -15.93139 -15.74986 -15.70030 -15.51378 -15.39112 -15.19285 -14.99137 -14.62097 -14.49299 -14.18330 -13.94624 -13.73011 -13.62726 -13.47221 -13.38437 -13.19800 -13.14823 -12.93308 -12.88645 -12.83367 -12.68775 -12.56758 -12.32236 -12.29544 -12.20675 -11.98676 -11.69651 -11.41371 -11.28681 -11.15123 -11.10342 -11.03991 -10.32442 -10.12259 -10.11321 -9.37496 -4.85418 0.07747 0.24045 1.15955 1.32142 1.35171 1.36743 1.59261 1.71036 1.87894 2.46163 2.55092 3.12404 3.31789 3.40616 3.45993 3.52966 3.67020 3.71984 3.76350 3.79513 3.86797 3.91738 3.92373 3.94936 3.99157 4.02213 4.15771 4.18403 4.37386 4.40776 4.52851 4.53421 4.59050 4.63470 4.68380 4.74227 4.74408 4.80795 4.80964 4.83173 4.85515 4.91791 4.94285 5.09312 5.11091 5.22249 5.22613 5.24752 5.32104 5.36282 5.47775 5.56735 5.57993 6.12546 6.34940 6.38496 6.52226 7.04354 7.31520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.643 3.357 7 O -0.594 6.594 8 N -0.689 5.689 9 C 0.138 3.862 10 H 0.112 0.888 11 C -0.165 4.165 12 C 0.122 3.878 13 H 0.100 0.900 14 N -0.695 5.695 15 C 0.519 3.481 16 O -0.563 6.563 17 C 0.035 3.965 18 O -0.312 6.312 19 C 0.127 3.873 20 C -0.165 4.165 21 C -0.089 4.089 22 O -0.547 6.547 23 Si 0.812 3.188 24 C -0.104 4.104 25 C -0.156 4.156 26 C -0.075 4.075 27 C -0.203 4.203 28 C -0.130 4.130 29 H 0.062 0.938 30 H 0.085 0.915 31 H 0.065 0.935 32 H 0.068 0.932 33 H 0.097 0.903 34 H 0.070 0.930 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.060 0.940 38 H 0.419 0.581 39 H 0.102 0.898 40 H 0.062 0.938 41 H 0.420 0.580 42 H 0.121 0.879 43 H 0.128 0.872 44 H 0.068 0.932 45 H 0.370 0.630 46 H -0.280 1.280 47 H -0.266 1.266 48 H 0.124 0.876 49 H 0.146 0.854 50 H 0.159 0.841 51 H 0.164 0.836 52 H 0.101 0.899 53 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.706 5.957 0.172 7.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.396 3.604 7 O -0.485 6.485 8 N -0.349 5.349 9 C 0.035 3.965 10 H 0.130 0.870 11 C -0.205 4.205 12 C 0.016 3.984 13 H 0.118 0.882 14 N -0.349 5.349 15 C 0.305 3.695 16 O -0.441 6.441 17 C -0.042 4.042 18 O -0.225 6.225 19 C 0.082 3.918 20 C -0.166 4.166 21 C -0.196 4.196 22 O -0.353 6.353 23 Si 0.712 3.288 24 C -0.121 4.121 25 C -0.174 4.174 26 C -0.093 4.093 27 C -0.221 4.221 28 C -0.168 4.168 29 H 0.082 0.918 30 H 0.104 0.896 31 H 0.084 0.916 32 H 0.087 0.913 33 H 0.116 0.884 34 H 0.089 0.911 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.079 0.921 38 H 0.256 0.744 39 H 0.121 0.879 40 H 0.081 0.919 41 H 0.258 0.742 42 H 0.139 0.861 43 H 0.145 0.855 44 H 0.086 0.914 45 H 0.218 0.782 46 H -0.207 1.207 47 H -0.192 1.192 48 H 0.142 0.858 49 H 0.164 0.836 50 H 0.177 0.823 51 H 0.182 0.818 52 H 0.120 0.880 53 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -3.135 4.187 -0.338 5.241 hybrid contribution -1.290 1.589 -0.194 2.056 sum -4.425 5.776 -0.533 7.296 Atomic orbital electron populations 1.22465 0.93871 1.03776 1.03515 1.22339 0.94560 0.92512 0.81473 1.21894 1.02410 0.90992 1.04253 1.22473 1.01542 1.02273 0.97439 1.86317 1.71527 1.23437 1.47189 1.18446 0.78580 0.80694 0.82649 1.90896 1.42390 1.71013 1.44166 1.44753 1.54860 1.12220 1.23037 1.22720 0.98507 0.77075 0.98230 0.86987 1.24014 1.00105 0.97234 0.99130 1.21632 0.91902 0.87848 0.97000 0.88192 1.45379 1.16732 1.04135 1.68688 1.20397 0.88309 0.83828 0.76947 1.90776 1.24468 1.80958 1.47867 1.22751 0.95932 0.79811 1.05745 1.86070 1.39473 1.13519 1.83412 1.18908 0.90289 0.86553 0.96080 1.19865 0.98118 0.91381 1.07208 1.25455 0.93305 1.16322 0.84528 1.86637 1.91256 1.36600 1.20791 0.92310 0.89083 0.70457 0.76934 1.21020 0.94949 0.97470 0.98684 1.21393 0.95200 0.98789 1.01991 1.21418 1.00779 0.91452 0.95644 1.21667 0.92502 1.02251 1.05693 1.23720 1.04408 0.93642 0.95058 0.91848 0.89601 0.91602 0.91296 0.88397 0.91101 0.91728 0.89548 0.92133 0.74405 0.87932 0.91913 0.74224 0.86131 0.85485 0.91355 0.78207 1.20717 1.19208 0.85830 0.83616 0.82322 0.81843 0.88048 0.85964 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.27 8.37 71.98 0.60 0.33 16 2 C 0.13 0.21 1.13 -10.80 -0.01 0.20 16 3 C -0.14 0.42 8.85 71.98 0.64 1.05 16 4 C -0.18 -0.41 8.37 71.98 0.60 0.19 16 5 O -0.37 -1.38 9.94 -55.41 -0.55 -1.93 16 6 C 0.64 2.70 8.06 129.79 1.05 3.74 16 7 O -0.59 -5.47 11.48 19.81 0.23 -5.24 16 8 N -0.69 1.98 5.36 -567.60 -3.04 -1.07 16 9 C 0.14 -0.73 4.12 45.52 0.19 -0.55 16 10 H 0.11 -0.39 7.47 -2.39 -0.02 -0.41 16 11 C -0.16 0.58 7.68 31.12 0.24 0.82 16 12 C 0.12 -0.61 4.32 45.52 0.20 -0.41 16 13 H 0.10 -0.10 7.46 -2.38 -0.02 -0.11 16 14 N -0.70 4.16 5.26 -440.05 -2.32 1.84 16 15 C 0.52 0.41 7.91 87.66 0.69 1.10 16 16 O -0.56 -6.55 16.10 16.02 0.26 -6.29 16 17 C 0.04 -0.14 5.22 71.24 0.37 0.23 16 18 O -0.31 -1.49 8.55 -73.47 -0.63 -2.12 16 19 C 0.13 0.60 6.61 22.50 0.15 0.75 16 20 C -0.16 -1.30 5.28 -19.77 -0.10 -1.41 16 21 C -0.09 -0.72 2.33 71.24 0.17 -0.55 16 22 O -0.55 -5.43 12.65 -148.98 -1.89 -7.32 16 23 Si 0.81 3.57 30.41 68.60 2.09 5.65 16 24 C -0.10 -0.68 8.66 22.25 0.19 -0.49 16 25 C -0.16 -0.34 10.04 22.28 0.22 -0.11 16 26 C -0.08 0.08 10.04 22.25 0.22 0.31 16 27 C -0.20 0.19 9.04 22.36 0.20 0.39 16 28 C -0.13 1.29 7.58 31.12 0.24 1.53 16 29 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 30 H 0.09 -0.14 8.14 -2.38 -0.02 -0.16 16 31 H 0.07 0.41 5.88 -2.39 -0.01 0.40 16 32 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 33 H 0.10 -0.60 8.14 -2.39 -0.02 -0.61 16 34 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 35 H 0.06 0.48 5.88 -2.39 -0.01 0.46 16 36 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 37 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 38 H 0.42 -3.06 8.84 -92.70 -0.82 -3.88 16 39 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 40 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 41 H 0.42 -5.20 8.70 -92.70 -0.81 -6.01 16 42 H 0.12 -1.10 7.65 -2.38 -0.02 -1.12 16 43 H 0.13 -1.32 7.68 -2.39 -0.02 -1.34 16 44 H 0.07 0.59 7.84 -2.39 -0.02 0.57 16 45 H 0.37 2.81 8.57 -74.05 -0.63 2.17 16 46 H -0.28 -2.43 6.81 99.48 0.68 -1.75 16 47 H -0.27 -1.78 7.11 99.48 0.71 -1.07 16 48 H 0.12 0.78 4.94 -2.91 -0.01 0.77 16 49 H 0.15 -0.30 8.06 -2.91 -0.02 -0.33 16 50 H 0.16 -1.13 8.06 -2.91 -0.02 -1.15 16 51 H 0.16 -1.37 6.30 -2.91 -0.02 -1.38 16 52 H 0.10 -1.23 8.14 -2.39 -0.02 -1.25 16 53 H 0.12 -1.53 8.12 -2.39 -0.02 -1.55 16 Total: 0.00 -26.71 430.13 -1.29 -28.00 By element: Atomic # 1 Polarization: -17.36 SS G_CDS: -1.29 Total: -18.65 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: 5.85 Total: 7.12 kcal Atomic # 7 Polarization: 6.13 SS G_CDS: -5.36 Total: 0.78 kcal Atomic # 8 Polarization: -20.32 SS G_CDS: -2.58 Total: -22.90 kcal Atomic # 14 Polarization: 3.57 SS G_CDS: 2.09 Total: 5.65 kcal Total: -26.71 -1.29 -28.00 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_2989392.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.531 kcal (2) G-P(sol) polarization free energy of solvation -26.709 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.287 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.997 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.528 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds