Wall clock time and date at job start Sun Mar 7 2021 00:23:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53005 * 109.47158 * 2 1 4 4 C 1.53000 * 109.47165 * 239.99892 * 2 1 3 5 5 O 1.45199 * 109.47168 * 120.00206 * 2 1 3 6 6 C 1.34633 * 117.00030 * 59.99712 * 5 2 1 7 7 O 1.21508 * 120.00048 * 0.02562 * 6 5 2 8 8 N 1.34782 * 119.99899 * 179.97438 * 6 5 2 9 9 C 1.46501 * 119.99939 * 180.02562 * 8 6 5 10 10 H 1.08995 * 112.84892 * 23.80644 * 9 8 6 11 11 C 1.53781 * 113.61171 * 155.00287 * 9 8 6 12 12 C 1.53787 * 87.08089 * 89.20440 * 11 9 8 13 13 H 1.08999 * 113.60941 * 270.79902 * 12 11 9 14 14 N 1.46497 * 113.61411 * 139.97909 * 12 11 9 15 15 C 1.34777 * 119.99525 * 156.52516 * 14 12 11 16 16 O 1.21283 * 120.00463 * 0.02562 * 15 14 12 17 17 C 1.50700 * 119.99675 * 179.72583 * 15 14 12 18 18 O 1.42899 * 109.47143 * 180.27800 * 17 15 14 19 19 C 1.35901 * 116.99988 * 179.97438 * 18 17 15 20 20 C 1.38728 * 120.05738 * 359.72926 * 19 18 17 21 21 C 1.38141 * 119.94283 * 179.69553 * 20 19 18 22 22 C 1.38267 * 120.05710 * 0.59845 * 21 20 19 23 23 C 1.50703 * 119.94586 * 179.69852 * 22 21 20 24 24 O 1.42890 * 109.47199 * 244.97653 * 23 22 21 25 25 Si 1.86305 * 109.47143 * 4.98009 * 23 22 21 26 26 C 1.38264 * 120.11072 * 359.67741 * 22 21 20 27 27 C 1.38139 * 120.05601 * 0.02562 * 26 22 21 28 28 C 1.53782 * 87.17311 * 25.38708 * 12 11 9 29 29 H 1.09002 * 109.47381 * 299.99841 * 1 2 3 30 30 H 1.09000 * 109.47477 * 60.00149 * 1 2 3 31 31 H 1.08998 * 109.47053 * 180.02562 * 1 2 3 32 32 H 1.08998 * 109.47245 * 179.97438 * 3 2 1 33 33 H 1.09000 * 109.46805 * 300.00263 * 3 2 1 34 34 H 1.09002 * 109.46844 * 59.99831 * 3 2 1 35 35 H 1.08998 * 109.47191 * 299.99984 * 4 2 1 36 36 H 1.09006 * 109.46938 * 60.00545 * 4 2 1 37 37 H 1.09000 * 109.47294 * 179.97438 * 4 2 1 38 38 H 0.96997 * 120.00045 * 0.02562 * 8 6 5 39 39 H 1.08993 * 113.61825 * 334.65499 * 11 9 8 40 40 H 1.09003 * 113.68663 * 203.75964 * 11 9 8 41 41 H 0.97000 * 120.00580 * 336.53261 * 14 12 11 42 42 H 1.09009 * 109.47352 * 300.27556 * 17 15 14 43 43 H 1.08998 * 109.47585 * 60.27844 * 17 15 14 44 44 H 1.07998 * 120.02513 * 359.97438 * 20 19 18 45 45 H 1.08009 * 119.97422 * 180.27702 * 21 20 19 46 46 H 1.09008 * 109.46941 * 124.97552 * 23 22 21 47 47 H 0.96702 * 114.00156 * 60.00621 * 24 23 22 48 48 H 1.48497 * 110.00018 * 179.97438 * 25 23 22 49 49 H 1.48510 * 109.99702 * 301.31727 * 25 23 22 50 50 H 1.07997 * 119.97376 * 180.02562 * 26 22 21 51 51 H 1.08003 * 120.03344 * 179.97438 * 27 26 22 52 52 H 1.08998 * 113.61082 * 89.15746 * 28 12 11 53 53 H 1.08997 * 113.61349 * 220.06153 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9515 -2.5096 0.5035 8 7 2.0680 -2.6657 2.4166 9 6 1.6748 -4.0672 2.5826 10 1 1.4224 -4.5506 1.6388 11 6 2.6485 -4.8815 3.4507 12 6 1.8064 -4.4485 4.6625 13 1 2.1351 -3.5104 5.1098 14 7 1.6101 -5.5119 5.6508 15 6 1.3294 -5.1984 6.9312 16 8 1.2388 -4.0360 7.2651 17 6 1.1213 -6.2924 7.9466 18 8 0.8325 -5.7118 9.2199 19 6 0.6165 -6.5675 10.2534 20 6 0.6756 -7.9377 10.0450 21 6 0.4619 -8.8052 11.0986 22 6 0.1770 -8.3091 12.3574 23 6 -0.0625 -9.2579 13.5035 24 8 -1.4134 -9.1321 13.9517 25 14 0.2436 -11.0061 12.9368 26 6 0.1118 -6.9439 12.5665 27 6 0.3308 -6.0721 11.5175 28 6 0.6270 -4.2869 3.6890 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.1300 1.4426 0.0005 33 1 1.6766 1.9563 -0.8900 34 1 1.6766 1.9564 0.8900 35 1 1.6766 -1.7489 -1.2492 36 1 1.6767 -0.2074 -2.1392 37 1 3.1300 -0.7209 -1.2495 38 1 2.6276 -2.2369 3.0828 39 1 3.6631 -4.4835 3.4595 40 1 2.6160 -5.9537 3.2572 41 1 1.6823 -6.4417 5.3838 42 1 0.2871 -6.9219 7.6367 43 1 2.0252 -6.8971 8.0196 44 1 0.8930 -8.3258 9.0609 45 1 0.5122 -9.8721 10.9379 46 1 0.6159 -9.0173 14.3221 47 1 -2.0731 -9.3319 13.2734 48 1 0.0115 -11.9515 14.0581 49 1 -0.6531 -11.3358 11.7998 50 1 -0.1105 -6.5588 13.5506 51 1 0.2794 -5.0058 11.6812 52 1 0.0398 -5.1960 3.5598 53 1 0.0122 -3.4095 3.8898 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_2989410.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:23:30 Heat of formation + Delta-G solvation = -125.831761 kcal Electronic energy + Delta-G solvation = -33665.829156 eV Core-core repulsion = 28891.868767 eV Total energy + Delta-G solvation = -4773.960390 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.03858 -41.56951 -40.95404 -39.85547 -38.93864 -37.91294 -37.22703 -35.58942 -34.95523 -33.38276 -32.34909 -31.74602 -29.67370 -28.39497 -28.33126 -26.80855 -26.37096 -25.69315 -24.05617 -23.53254 -22.41431 -21.76515 -21.16400 -20.68838 -19.54059 -19.32799 -18.50483 -18.15084 -17.75301 -17.45766 -17.32821 -17.18217 -16.85941 -16.55289 -16.38010 -16.11351 -15.73100 -15.57293 -15.54003 -15.41131 -15.10425 -14.81833 -14.63366 -14.41443 -14.35770 -13.99063 -13.72428 -13.58806 -13.51124 -13.42611 -13.37256 -13.17293 -13.11200 -12.94728 -12.89807 -12.55958 -12.35682 -12.29496 -12.11813 -12.06293 -11.98267 -11.70454 -11.59334 -11.42829 -11.15995 -10.99828 -10.57127 -10.31770 -10.09908 -10.03221 -9.23726 -4.89902 0.27763 0.31549 1.09593 1.34440 1.42395 1.50117 1.61349 1.68200 1.99222 2.61398 2.65197 3.06321 3.30388 3.45690 3.47049 3.55233 3.71080 3.74549 3.76063 3.80579 3.83592 3.91463 3.94570 3.98274 4.05077 4.11975 4.31409 4.40919 4.43514 4.52922 4.55610 4.58759 4.63344 4.68353 4.70660 4.73759 4.75201 4.79833 4.84712 4.85646 4.93348 4.96913 4.97846 5.09958 5.16437 5.23851 5.24570 5.26065 5.32264 5.47134 5.50277 5.57651 5.70386 6.27022 6.31133 6.48190 6.51318 7.13535 7.27826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.647 3.353 7 O -0.590 6.590 8 N -0.688 5.688 9 C 0.134 3.866 10 H 0.108 0.892 11 C -0.126 4.126 12 C 0.120 3.880 13 H 0.095 0.905 14 N -0.696 5.696 15 C 0.512 3.488 16 O -0.575 6.575 17 C 0.035 3.965 18 O -0.321 6.321 19 C 0.122 3.878 20 C -0.199 4.199 21 C -0.077 4.077 22 C -0.158 4.158 23 C -0.083 4.083 24 O -0.552 6.552 25 Si 0.773 3.227 26 C -0.060 4.060 27 C -0.167 4.167 28 C -0.163 4.163 29 H 0.058 0.942 30 H 0.088 0.912 31 H 0.064 0.936 32 H 0.070 0.930 33 H 0.099 0.901 34 H 0.067 0.933 35 H 0.065 0.935 36 H 0.087 0.913 37 H 0.063 0.937 38 H 0.415 0.585 39 H 0.094 0.906 40 H 0.136 0.864 41 H 0.425 0.575 42 H 0.125 0.875 43 H 0.131 0.869 44 H 0.166 0.834 45 H 0.152 0.848 46 H 0.120 0.880 47 H 0.385 0.615 48 H -0.308 1.308 49 H -0.276 1.276 50 H 0.133 0.867 51 H 0.125 0.875 52 H 0.115 0.885 53 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.979 -5.682 -4.100 8.595 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.286 6.286 6 C 0.400 3.600 7 O -0.481 6.481 8 N -0.347 5.347 9 C 0.029 3.971 10 H 0.126 0.874 11 C -0.164 4.164 12 C 0.015 3.985 13 H 0.113 0.887 14 N -0.350 5.350 15 C 0.299 3.701 16 O -0.453 6.453 17 C -0.043 4.043 18 O -0.234 6.234 19 C 0.076 3.924 20 C -0.218 4.218 21 C -0.095 4.095 22 C -0.159 4.159 23 C -0.191 4.191 24 O -0.360 6.360 25 Si 0.678 3.322 26 C -0.078 4.078 27 C -0.186 4.186 28 C -0.203 4.203 29 H 0.077 0.923 30 H 0.107 0.893 31 H 0.083 0.917 32 H 0.089 0.911 33 H 0.118 0.882 34 H 0.086 0.914 35 H 0.084 0.916 36 H 0.106 0.894 37 H 0.082 0.918 38 H 0.252 0.748 39 H 0.112 0.888 40 H 0.154 0.846 41 H 0.264 0.736 42 H 0.143 0.857 43 H 0.148 0.852 44 H 0.183 0.817 45 H 0.169 0.831 46 H 0.138 0.862 47 H 0.235 0.765 48 H -0.237 1.237 49 H -0.203 1.203 50 H 0.151 0.849 51 H 0.143 0.857 52 H 0.133 0.867 53 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 4.536 -5.443 -3.903 8.089 hybrid contribution -1.243 0.534 0.234 1.373 sum 3.294 -4.909 -3.669 6.958 Atomic orbital electron populations 1.22480 0.94150 1.03721 1.03438 1.22363 0.94381 0.92586 0.81566 1.21902 1.02527 0.90956 1.04189 1.22472 1.01716 1.02294 0.97162 1.86316 1.71533 1.23321 1.47386 1.18303 0.78545 0.80780 0.82350 1.90901 1.42002 1.70852 1.44309 1.44440 1.54904 1.12220 1.23113 1.21750 0.96694 0.79145 0.99505 0.87360 1.23717 0.98811 1.02826 0.91083 1.22597 0.96851 0.92048 0.86987 0.88672 1.45618 1.71235 1.11303 1.06858 1.20622 0.75890 0.89665 0.83955 1.90771 1.51328 1.22754 1.80447 1.22786 1.05834 0.94610 0.81023 1.86131 1.85353 1.34909 1.17029 1.19214 0.96109 0.89522 0.87525 1.21498 1.07417 0.90829 1.02013 1.21104 0.96491 1.00450 0.91407 1.20275 1.05156 0.94682 0.95745 1.25248 0.85539 1.09145 0.99213 1.86573 1.15701 1.91288 1.42434 0.94099 0.89923 0.71451 0.76739 1.20916 0.95889 0.92496 0.98534 1.20623 1.06032 1.00990 0.90948 1.24049 0.97562 1.03331 0.95387 0.92256 0.89348 0.91687 0.91072 0.88218 0.91423 0.91585 0.89437 0.91802 0.74838 0.88755 0.84616 0.73644 0.85726 0.85190 0.81666 0.83061 0.86180 0.76544 1.23660 1.20261 0.84920 0.85675 0.86722 0.92822 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.69 8.37 71.98 0.60 -0.09 16 2 C 0.13 0.42 1.13 -10.79 -0.01 0.40 16 3 C -0.14 0.20 8.85 71.98 0.64 0.84 16 4 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 5 O -0.37 -2.21 9.94 -55.42 -0.55 -2.76 16 6 C 0.65 4.19 8.06 129.79 1.05 5.24 16 7 O -0.59 -6.59 11.48 19.82 0.23 -6.37 16 8 N -0.69 0.02 5.27 -567.32 -2.99 -2.97 16 9 C 0.13 -0.51 4.33 45.58 0.20 -0.31 16 10 H 0.11 -0.18 7.46 -2.39 -0.02 -0.20 16 11 C -0.13 1.29 7.58 31.12 0.24 1.53 16 12 C 0.12 -0.62 4.09 45.52 0.19 -0.43 16 13 H 0.10 0.00 7.50 -2.39 -0.02 -0.01 16 14 N -0.70 5.26 5.36 -440.03 -2.36 2.90 16 15 C 0.51 0.26 7.91 87.66 0.69 0.95 16 16 O -0.57 -7.41 16.12 16.00 0.26 -7.16 16 17 C 0.04 -0.18 5.22 71.24 0.37 0.19 16 18 O -0.32 -1.52 9.67 -73.40 -0.71 -2.23 16 19 C 0.12 0.29 6.69 22.51 0.15 0.44 16 20 C -0.20 0.74 9.04 22.36 0.20 0.95 16 21 C -0.08 0.28 8.66 22.25 0.19 0.47 16 22 C -0.16 0.08 5.35 -19.85 -0.11 -0.03 16 23 C -0.08 0.09 2.80 71.24 0.20 0.29 16 24 O -0.55 -1.46 12.83 -148.98 -1.91 -3.37 16 25 Si 0.77 -2.80 29.88 68.60 2.05 -0.75 16 26 C -0.06 -0.14 9.68 22.25 0.22 0.08 16 27 C -0.17 -0.72 9.99 22.37 0.22 -0.49 16 28 C -0.16 0.55 7.69 31.18 0.24 0.79 16 29 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 30 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 31 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 32 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 34 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 35 H 0.07 0.51 5.88 -2.39 -0.01 0.49 16 36 H 0.09 -0.05 8.14 -2.38 -0.02 -0.07 16 37 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 38 H 0.41 -1.34 8.81 -92.71 -0.82 -2.16 16 39 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 40 H 0.14 -2.12 8.11 -2.39 -0.02 -2.14 16 41 H 0.42 -6.77 8.71 -92.71 -0.81 -7.57 16 42 H 0.13 -1.43 7.65 -2.38 -0.02 -1.45 16 43 H 0.13 -1.60 7.68 -2.39 -0.02 -1.62 16 44 H 0.17 -1.88 6.30 -2.91 -0.02 -1.90 16 45 H 0.15 -1.27 4.84 -2.91 -0.01 -1.28 16 46 H 0.12 -0.26 7.96 -2.38 -0.02 -0.28 16 47 H 0.39 -1.18 8.70 -74.06 -0.64 -1.83 16 48 H -0.31 -1.51 7.11 99.48 0.71 -0.81 16 49 H -0.28 0.30 7.01 99.48 0.70 1.00 16 50 H 0.13 0.19 8.06 -2.91 -0.02 0.16 16 51 H 0.13 0.63 8.06 -2.91 -0.02 0.60 16 52 H 0.11 -0.75 8.14 -2.39 -0.02 -0.77 16 53 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 Total: 0.00 -31.02 431.47 -1.39 -32.40 By element: Atomic # 1 Polarization: -19.33 SS G_CDS: -1.28 Total: -20.61 kcal Atomic # 6 Polarization: 5.04 SS G_CDS: 5.88 Total: 10.91 kcal Atomic # 7 Polarization: 5.28 SS G_CDS: -5.35 Total: -0.07 kcal Atomic # 8 Polarization: -19.20 SS G_CDS: -2.69 Total: -21.88 kcal Atomic # 14 Polarization: -2.80 SS G_CDS: 2.05 Total: -0.75 kcal Total: -31.02 -1.39 -32.40 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_2989410.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.430 kcal (2) G-P(sol) polarization free energy of solvation -31.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.446 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.386 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.402 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.832 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds