Wall clock time and date at job start Sun Mar 7 2021 00:24:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53008 * 109.47054 * 2 1 4 4 C 1.53004 * 109.47588 * 240.00045 * 2 1 3 5 5 O 1.45206 * 109.47274 * 119.99714 * 2 1 3 6 6 C 1.34641 * 116.99598 * 60.00349 * 5 2 1 7 7 O 1.21508 * 119.99842 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99681 * 180.02562 * 6 5 2 9 9 C 1.46496 * 119.99619 * 179.97438 * 8 6 5 10 10 H 1.08994 * 112.85202 * 336.19185 * 9 8 6 11 11 C 1.53777 * 113.68901 * 107.46624 * 9 8 6 12 12 C 1.53785 * 87.08241 * 139.98818 * 11 9 8 13 13 H 1.09002 * 113.61570 * 220.01842 * 12 11 9 14 14 N 1.46500 * 113.68813 * 89.12417 * 12 11 9 15 15 C 1.34781 * 119.99985 * 105.94035 * 14 12 11 16 16 O 1.21280 * 119.99799 * 359.97438 * 15 14 12 17 17 C 1.50701 * 119.99932 * 179.97438 * 15 14 12 18 18 F 1.39903 * 109.47052 * 299.99699 * 17 15 14 19 19 F 1.39900 * 109.46942 * 59.99968 * 17 15 14 20 20 O 1.42895 * 109.46838 * 179.97438 * 17 15 14 21 21 C 1.35902 * 117.00017 * 179.97438 * 20 17 15 22 22 C 1.38729 * 120.05541 * 359.73110 * 21 20 17 23 23 C 1.38142 * 119.94740 * 179.69643 * 22 21 20 24 24 C 1.38271 * 120.05371 * 0.59619 * 23 22 21 25 25 C 1.50694 * 119.94963 * 179.70166 * 24 23 22 26 26 O 1.42905 * 109.47470 * 244.97921 * 25 24 23 27 27 Si 1.86309 * 109.46885 * 4.97605 * 25 24 23 28 28 C 1.38268 * 120.10975 * 359.67649 * 24 23 22 29 29 C 1.38151 * 120.05722 * 0.02562 * 28 24 23 30 30 C 1.53781 * 87.08241 * 334.56547 * 12 11 9 31 31 H 1.09003 * 109.47237 * 299.99979 * 1 2 3 32 32 H 1.09004 * 109.46981 * 60.00126 * 1 2 3 33 33 H 1.09000 * 109.46878 * 179.97438 * 1 2 3 34 34 H 1.08998 * 109.46691 * 179.97438 * 3 2 1 35 35 H 1.09000 * 109.46803 * 300.00161 * 3 2 1 36 36 H 1.08993 * 109.46869 * 59.99922 * 3 2 1 37 37 H 1.09000 * 109.46457 * 300.00121 * 4 2 1 38 38 H 1.09000 * 109.46954 * 59.99419 * 4 2 1 39 39 H 1.08997 * 109.47182 * 180.02562 * 4 2 1 40 40 H 0.97001 * 119.99504 * 359.97438 * 8 6 5 41 41 H 1.08999 * 113.61947 * 25.44244 * 11 9 8 42 42 H 1.08997 * 113.61348 * 254.53459 * 11 9 8 43 43 H 0.96998 * 120.00149 * 285.93056 * 14 12 11 44 44 H 1.08001 * 120.02500 * 359.97438 * 22 21 20 45 45 H 1.08000 * 119.97487 * 180.27295 * 23 22 21 46 46 H 1.08996 * 109.47612 * 124.97356 * 25 24 23 47 47 H 0.96701 * 113.99599 * 59.99068 * 26 25 24 48 48 H 1.48498 * 110.00136 * 180.02562 * 27 25 24 49 49 H 1.48504 * 109.99750 * 301.32035 * 27 25 24 50 50 H 1.08001 * 119.97673 * 179.97438 * 28 24 23 51 51 H 1.07998 * 120.02620 * 179.97438 * 29 28 24 52 52 H 1.09000 * 113.61578 * 139.97748 * 30 12 11 53 53 H 1.08997 * 113.61673 * 270.88717 * 30 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9723 1.3384 7 8 0.9510 -2.5094 0.5040 8 7 2.0673 -2.6654 2.4172 9 6 1.6732 -4.0665 2.5837 10 1 0.7589 -4.3159 2.0453 11 6 2.8197 -5.0632 2.3455 12 6 2.2702 -5.8601 3.5405 13 1 3.0467 -6.2661 4.1888 14 7 1.2607 -6.8551 3.1701 15 6 1.5754 -8.1656 3.1671 16 8 2.6945 -8.5212 3.4706 17 6 0.5367 -9.1891 2.7868 18 9 -0.5466 -9.1038 3.6678 19 9 0.0968 -8.9442 1.4815 20 8 1.1080 -10.4969 2.8588 21 6 0.2982 -11.5421 2.5447 22 6 -1.0207 -11.3141 2.1801 23 6 -1.8401 -12.3777 1.8552 24 6 -1.3502 -13.6698 1.9050 25 6 -2.2481 -14.8288 1.5566 26 8 -2.4468 -15.6424 2.7145 27 14 -3.8915 -14.1840 0.9612 28 6 -0.0376 -13.9001 2.2736 29 6 0.7876 -12.8394 2.5935 30 6 1.6736 -4.5367 4.0479 31 1 -0.3634 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 -0.0005 34 1 3.1300 1.4425 0.0005 35 1 1.6766 1.9564 -0.8900 36 1 1.6766 1.9563 0.8899 37 1 1.6767 -1.7489 -1.2492 38 1 1.6767 -0.2075 -2.1392 39 1 3.1301 -0.7216 -1.2489 40 1 2.6268 -2.2364 3.0834 41 1 3.8091 -4.6407 2.5205 42 1 2.7468 -5.5939 1.3962 43 1 0.3657 -6.5707 2.9272 44 1 -1.4053 -10.3055 2.1460 45 1 -2.8657 -12.2004 1.5670 46 1 -1.7846 -15.4237 0.7697 47 1 -2.8565 -15.1770 3.4565 48 1 -4.7865 -15.3173 0.6149 49 1 -4.5192 -13.3449 2.0135 50 1 0.3427 -14.9102 2.3122 51 1 1.8127 -13.0199 2.8817 52 1 0.6755 -4.6422 4.4729 53 1 2.3497 -3.9701 4.6882 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_4549640.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:09 Heat of formation + Delta-G solvation = -215.671299 kcal Electronic energy + Delta-G solvation = -40156.016698 eV Core-core repulsion = 34439.252623 eV Total energy + Delta-G solvation = -5716.764076 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.173 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -50.92006 -48.89100 -42.04207 -41.53725 -41.30886 -39.97810 -39.25708 -37.98931 -37.37977 -35.72517 -35.00755 -33.53057 -32.44878 -32.05353 -29.19699 -28.37606 -28.30998 -26.86356 -26.57216 -25.86396 -24.53601 -23.28749 -22.89591 -22.49836 -21.30981 -20.80120 -20.65921 -19.84927 -19.71798 -19.13672 -18.66944 -18.07730 -17.61806 -17.36902 -17.19657 -16.95836 -16.70839 -16.63948 -16.40061 -16.22393 -15.90888 -15.81304 -15.68938 -15.43931 -15.40700 -15.37429 -15.22695 -15.13264 -14.80956 -14.52120 -14.41909 -14.40412 -14.23628 -13.99527 -13.60648 -13.56253 -13.38287 -13.27100 -13.14902 -13.04416 -12.92173 -12.87315 -12.56813 -12.44689 -12.31610 -12.25692 -12.06388 -11.83752 -11.72751 -11.60258 -11.40085 -11.12824 -10.64271 -10.58823 -10.19493 -10.17813 -9.61977 -4.93531 0.00195 0.14627 0.41580 0.57872 1.16488 1.28887 1.57360 1.64629 1.72154 1.93770 1.95655 2.43821 2.70471 3.12220 3.18218 3.25192 3.38364 3.39532 3.52779 3.63871 3.70484 3.72085 3.73333 3.79362 3.90739 3.93700 4.08124 4.19232 4.35440 4.38493 4.49213 4.56809 4.58419 4.59812 4.60449 4.67606 4.75785 4.76188 4.82155 4.83508 4.86958 4.87887 4.89325 4.93166 5.03343 5.04417 5.15673 5.26165 5.29133 5.33277 5.36624 5.41923 5.58698 5.76322 5.82837 6.37511 6.40469 6.47018 7.33123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.369 6.369 6 C 0.642 3.358 7 O -0.594 6.594 8 N -0.687 5.687 9 C 0.133 3.867 10 H 0.109 0.891 11 C -0.162 4.162 12 C 0.117 3.883 13 H 0.118 0.882 14 N -0.673 5.673 15 C 0.522 3.478 16 O -0.502 6.502 17 C 0.433 3.567 18 F -0.171 7.171 19 F -0.171 7.171 20 O -0.304 6.304 21 C 0.086 3.914 22 C -0.194 4.194 23 C -0.079 4.079 24 C -0.138 4.138 25 C -0.077 4.077 26 O -0.546 6.546 27 Si 0.760 3.240 28 C -0.057 4.057 29 C -0.135 4.135 30 C -0.127 4.127 31 H 0.062 0.938 32 H 0.085 0.915 33 H 0.065 0.935 34 H 0.069 0.931 35 H 0.097 0.903 36 H 0.070 0.930 37 H 0.064 0.936 38 H 0.085 0.915 39 H 0.061 0.939 40 H 0.420 0.580 41 H 0.114 0.886 42 H 0.065 0.935 43 H 0.422 0.578 44 H 0.141 0.859 45 H 0.152 0.848 46 H 0.131 0.869 47 H 0.386 0.614 48 H -0.301 1.301 49 H -0.281 1.281 50 H 0.151 0.849 51 H 0.146 0.854 52 H 0.102 0.898 53 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.476 6.268 0.647 6.319 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.092 3.908 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.396 3.604 7 O -0.485 6.485 8 N -0.347 5.347 9 C 0.029 3.971 10 H 0.127 0.873 11 C -0.202 4.202 12 C 0.012 3.988 13 H 0.136 0.864 14 N -0.326 5.326 15 C 0.300 3.700 16 O -0.375 6.375 17 C 0.356 3.644 18 F -0.152 7.152 19 F -0.152 7.152 20 O -0.221 6.221 21 C 0.043 3.957 22 C -0.212 4.212 23 C -0.097 4.097 24 C -0.139 4.139 25 C -0.186 4.186 26 O -0.354 6.354 27 Si 0.665 3.335 28 C -0.075 4.075 29 C -0.153 4.153 30 C -0.166 4.166 31 H 0.082 0.918 32 H 0.104 0.896 33 H 0.083 0.917 34 H 0.088 0.912 35 H 0.116 0.884 36 H 0.089 0.911 37 H 0.082 0.918 38 H 0.104 0.896 39 H 0.080 0.920 40 H 0.258 0.742 41 H 0.132 0.868 42 H 0.084 0.916 43 H 0.261 0.739 44 H 0.158 0.842 45 H 0.169 0.831 46 H 0.148 0.852 47 H 0.236 0.764 48 H -0.229 1.229 49 H -0.208 1.208 50 H 0.169 0.831 51 H 0.164 0.836 52 H 0.120 0.880 53 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.437 5.443 0.210 5.464 hybrid contribution -0.493 -0.024 1.020 1.133 sum -0.930 5.419 1.230 5.634 Atomic orbital electron populations 1.22471 0.93960 1.03752 1.03503 1.22333 0.94488 0.92523 0.81494 1.21894 1.02439 0.90969 1.04235 1.22474 1.01587 1.02263 0.97420 1.86316 1.71512 1.23388 1.47161 1.18461 0.78576 0.80710 0.82671 1.90908 1.42315 1.71034 1.44242 1.44690 1.54878 1.12079 1.23042 1.22754 0.98612 0.77393 0.98314 0.87310 1.24038 1.00540 0.96809 0.98804 1.21939 0.91399 0.87485 0.97957 0.86433 1.45469 1.16980 1.03314 1.66858 1.19327 0.87164 0.83699 0.79828 1.90860 1.20869 1.79719 1.46044 1.21776 0.81415 0.86272 0.74970 1.93198 1.57136 1.96075 1.68826 1.93206 1.90125 1.94147 1.37747 1.86641 1.39130 1.12390 1.83933 1.19248 0.90159 0.87208 0.99058 1.21596 0.92612 1.01665 1.05360 1.21054 1.00164 0.91293 0.97168 1.20408 0.95806 0.94802 1.02852 1.25155 1.07899 0.93947 0.91565 1.86585 1.83389 1.40326 1.25145 0.94105 0.73385 0.79393 0.86570 1.21081 0.92301 0.99145 0.94949 1.20717 1.02178 0.88558 1.03896 1.23760 1.04740 0.92877 0.95195 0.91849 0.89627 0.91653 0.91229 0.88441 0.91106 0.91752 0.89588 0.92035 0.74222 0.86764 0.91619 0.73934 0.84187 0.83107 0.85160 0.76441 1.22876 1.20802 0.83086 0.83637 0.87999 0.84880 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.30 8.37 71.98 0.60 0.30 16 2 C 0.13 0.19 1.13 -10.79 -0.01 0.18 16 3 C -0.14 0.44 8.85 71.98 0.64 1.08 16 4 C -0.18 -0.40 8.37 71.98 0.60 0.20 16 5 O -0.37 -1.24 9.94 -55.50 -0.55 -1.79 16 6 C 0.64 2.50 8.06 129.79 1.05 3.55 16 7 O -0.59 -5.58 11.48 19.81 0.23 -5.35 16 8 N -0.69 2.53 5.36 -567.60 -3.04 -0.52 16 9 C 0.13 -0.77 4.13 45.52 0.19 -0.58 16 10 H 0.11 -0.33 7.46 -2.39 -0.02 -0.34 16 11 C -0.16 0.82 7.68 31.12 0.24 1.06 16 12 C 0.12 -0.73 4.30 45.52 0.20 -0.53 16 13 H 0.12 -0.55 7.50 -2.39 -0.02 -0.57 16 14 N -0.67 2.66 5.27 -440.02 -2.32 0.34 16 15 C 0.52 1.74 7.34 87.66 0.64 2.38 16 16 O -0.50 -5.11 16.12 16.01 0.26 -4.85 16 17 C 0.43 1.65 2.05 71.24 0.15 1.79 16 18 F -0.17 -0.35 15.27 44.97 0.69 0.34 16 19 F -0.17 -0.45 15.31 44.97 0.69 0.23 16 20 O -0.30 -2.46 9.60 -73.41 -0.70 -3.16 16 21 C 0.09 0.51 6.48 22.51 0.15 0.66 16 22 C -0.19 -0.62 8.26 22.36 0.18 -0.44 16 23 C -0.08 -0.02 8.66 22.25 0.19 0.17 16 24 C -0.14 -0.02 5.35 -19.85 -0.11 -0.13 16 25 C -0.08 0.10 2.80 71.23 0.20 0.30 16 26 O -0.55 -0.96 12.83 -148.98 -1.91 -2.87 16 27 Si 0.76 -1.71 29.88 68.60 2.05 0.34 16 28 C -0.06 -0.06 9.68 22.26 0.22 0.15 16 29 C -0.14 -0.49 9.99 22.37 0.22 -0.27 16 30 C -0.13 1.42 7.57 31.12 0.24 1.66 16 31 H 0.06 0.05 8.14 -2.39 -0.02 0.04 16 32 H 0.08 -0.12 8.14 -2.38 -0.02 -0.14 16 33 H 0.06 0.43 5.88 -2.39 -0.01 0.42 16 34 H 0.07 -0.23 8.14 -2.39 -0.02 -0.24 16 35 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 36 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 37 H 0.06 0.48 5.88 -2.39 -0.01 0.46 16 38 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 39 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 40 H 0.42 -3.62 8.84 -92.71 -0.82 -4.44 16 41 H 0.11 -0.79 8.14 -2.39 -0.02 -0.81 16 42 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 43 H 0.42 -3.52 8.71 -92.71 -0.81 -4.33 16 44 H 0.14 0.22 5.10 -2.91 -0.01 0.20 16 45 H 0.15 -0.59 4.83 -2.91 -0.01 -0.60 16 46 H 0.13 -0.44 7.96 -2.39 -0.02 -0.46 16 47 H 0.39 -1.37 8.70 -74.06 -0.64 -2.01 16 48 H -0.30 -1.64 7.11 99.48 0.71 -0.93 16 49 H -0.28 -0.37 7.01 99.48 0.70 0.33 16 50 H 0.15 -0.26 8.06 -2.91 -0.02 -0.29 16 51 H 0.15 0.25 8.06 -2.91 -0.02 0.23 16 52 H 0.10 -1.29 8.14 -2.39 -0.02 -1.30 16 53 H 0.13 -1.98 8.12 -2.39 -0.02 -2.00 16 Total: 0.00 -23.26 440.77 -0.28 -23.54 By element: Atomic # 1 Polarization: -16.53 SS G_CDS: -1.24 Total: -17.77 kcal Atomic # 6 Polarization: 5.96 SS G_CDS: 5.58 Total: 11.54 kcal Atomic # 7 Polarization: 5.18 SS G_CDS: -5.36 Total: -0.18 kcal Atomic # 8 Polarization: -15.35 SS G_CDS: -2.68 Total: -18.03 kcal Atomic # 9 Polarization: -0.80 SS G_CDS: 1.38 Total: 0.57 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: 2.05 Total: 0.34 kcal Total: -23.26 -0.28 -23.54 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_4549640.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -192.132 kcal (2) G-P(sol) polarization free energy of solvation -23.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -215.392 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.539 kcal (6) G-S(sol) free energy of system = (1) + (5) -215.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds