Wall clock time and date at job start Sun Mar 7 2021 00:24:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53002 * 109.47073 * 2 1 4 4 C 1.53000 * 109.47052 * 239.99974 * 2 1 3 5 5 O 1.45201 * 109.47189 * 119.99852 * 2 1 3 6 6 C 1.34647 * 116.99660 * 60.00041 * 5 2 1 7 7 O 1.21503 * 120.00180 * 0.02562 * 6 5 2 8 8 N 1.34772 * 119.99367 * 179.97438 * 6 5 2 9 9 C 1.46501 * 119.99675 * 179.97438 * 8 6 5 10 10 H 1.09001 * 112.85094 * 336.19971 * 9 8 6 11 11 C 1.53787 * 113.61511 * 107.50209 * 9 8 6 12 12 C 1.53787 * 87.07994 * 139.98393 * 11 9 8 13 13 H 1.08998 * 113.68847 * 220.01262 * 12 11 9 14 14 N 1.46496 * 113.61670 * 89.11608 * 12 11 9 15 15 C 1.34784 * 119.99797 * 107.50033 * 14 12 11 16 16 O 1.21283 * 119.99952 * 0.02562 * 15 14 12 17 17 C 1.50691 * 119.99820 * 180.02562 * 15 14 12 18 18 O 1.42905 * 109.47131 * 179.97438 * 17 15 14 19 19 C 1.35903 * 117.00083 * 179.97438 * 18 17 15 20 20 C 1.38708 * 120.05025 * 180.02562 * 19 18 17 21 21 C 1.38170 * 119.94116 * 180.02562 * 20 19 18 22 22 C 1.50699 * 119.97456 * 179.97438 * 21 20 19 23 23 O 1.42907 * 109.46603 * 65.00150 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 184.99453 * 22 21 20 25 25 C 1.38251 * 120.05317 * 0.24798 * 21 20 19 26 26 C 1.38288 * 120.10919 * 359.49666 * 25 21 20 27 27 C 1.38120 * 120.05616 * 0.50611 * 26 25 21 28 28 C 1.53782 * 113.61604 * 205.00153 * 9 8 6 29 29 H 1.09007 * 109.47399 * 299.99801 * 1 2 3 30 30 H 1.09001 * 109.47648 * 60.00419 * 1 2 3 31 31 H 1.09002 * 109.47293 * 180.02562 * 1 2 3 32 32 H 1.08995 * 109.46575 * 180.02562 * 3 2 1 33 33 H 1.09001 * 109.46541 * 300.00259 * 3 2 1 34 34 H 1.08999 * 109.46554 * 60.00045 * 3 2 1 35 35 H 1.09002 * 109.47087 * 300.00145 * 4 2 1 36 36 H 1.09004 * 109.46738 * 59.99518 * 4 2 1 37 37 H 1.08993 * 109.47007 * 180.02562 * 4 2 1 38 38 H 0.96992 * 120.00576 * 0.02562 * 8 6 5 39 39 H 1.09000 * 113.61252 * 25.43275 * 11 9 8 40 40 H 1.08993 * 113.61359 * 254.52913 * 11 9 8 41 41 H 0.96997 * 120.00413 * 287.50989 * 14 12 11 42 42 H 1.09006 * 109.47520 * 60.00370 * 17 15 14 43 43 H 1.09003 * 109.47209 * 299.99829 * 17 15 14 44 44 H 1.07995 * 120.03190 * 0.04292 * 20 19 18 45 45 H 1.08996 * 109.47117 * 305.00063 * 22 21 20 46 46 H 0.96697 * 114.00527 * 59.99993 * 23 22 21 47 47 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 48 48 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 49 49 H 1.08001 * 119.94271 * 179.72250 * 25 21 20 50 50 H 1.08000 * 119.96996 * 180.23244 * 26 25 21 51 51 H 1.08004 * 120.02316 * 179.72400 * 27 26 25 52 52 H 1.09002 * 113.61509 * 105.47397 * 28 9 8 53 53 H 1.08994 * 113.68770 * 334.57674 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9724 1.3383 7 8 0.9516 -2.5097 0.5036 8 7 2.0681 -2.6657 2.4166 9 6 1.6740 -4.0668 2.5832 10 1 0.7592 -4.3160 2.0454 11 6 2.8217 -5.0622 2.3443 12 6 2.2735 -5.8600 3.5393 13 1 3.0498 -6.2658 4.1880 14 7 1.2651 -6.8554 3.1673 15 6 1.5718 -8.1676 3.1933 16 8 2.6826 -8.5243 3.5249 17 6 0.5347 -9.1915 2.8101 18 8 1.0964 -10.5013 2.9161 19 6 0.2866 -11.5471 2.6041 20 6 0.7667 -12.8458 2.6856 21 6 -0.0585 -13.9074 2.3673 22 6 0.4626 -15.3187 2.4550 23 8 0.7663 -15.6305 3.8161 24 14 -0.8320 -16.4991 1.8215 25 6 -1.3601 -13.6756 1.9631 26 6 -1.8426 -12.3819 1.8862 27 6 -1.0217 -11.3174 2.2032 28 6 1.6755 -4.5374 4.0472 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3634 -1.0277 0.0005 32 1 3.1300 1.4424 -0.0005 33 1 1.6766 1.9563 -0.8900 34 1 1.6766 1.9563 0.8900 35 1 1.6766 -1.7489 -1.2492 36 1 1.6765 -0.2074 -2.1392 37 1 3.1299 -0.7217 -1.2490 38 1 2.6276 -2.2368 3.0828 39 1 3.8106 -4.6383 2.5189 40 1 2.7490 -5.5926 1.3949 41 1 0.3767 -6.5702 2.9023 42 1 0.2132 -9.0165 1.7834 43 1 -0.3224 -9.1082 3.4785 44 1 1.7845 -13.0272 2.9977 45 1 1.3652 -15.4109 1.8509 46 1 0.0077 -15.5689 4.4125 47 1 -1.1798 -16.1654 0.4168 48 1 -0.3306 -17.8945 1.9032 49 1 -2.0022 -14.5064 1.7104 50 1 -2.8610 -12.2036 1.5738 51 1 -1.3978 -10.3070 2.1387 52 1 0.6777 -4.6443 4.4726 53 1 2.3506 -3.9708 4.6886 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_4860298.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:19 Heat of formation + Delta-G solvation = -126.787816 kcal Electronic energy + Delta-G solvation = -33860.146680 eV Core-core repulsion = 29086.144833 eV Total energy + Delta-G solvation = -4774.001847 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.01422 -41.60728 -41.01779 -39.81594 -38.87615 -37.93939 -37.22470 -35.61302 -34.89292 -33.46449 -32.47558 -31.61495 -29.33418 -28.38609 -28.32067 -26.85704 -26.82945 -25.89618 -23.68317 -23.31658 -22.80539 -21.75757 -21.23185 -20.61181 -19.35118 -19.22541 -18.56870 -17.90664 -17.68170 -17.46796 -17.32075 -17.19588 -17.03505 -16.68252 -16.52944 -16.18523 -15.85095 -15.59202 -15.47083 -15.38090 -15.07856 -14.77361 -14.60560 -14.48642 -14.19669 -14.04688 -13.94984 -13.62035 -13.43127 -13.37963 -13.19661 -13.14725 -12.93220 -12.92569 -12.88473 -12.61458 -12.56369 -12.31936 -12.15213 -12.02641 -11.98587 -11.70965 -11.68051 -11.41070 -11.15296 -11.07367 -10.49564 -10.32723 -10.12383 -9.94477 -9.29509 -4.99338 0.19899 0.38226 1.16170 1.26908 1.36067 1.44242 1.65773 1.71289 1.97208 2.53980 2.66593 3.12606 3.31741 3.42442 3.47953 3.53139 3.67587 3.72281 3.76510 3.79571 3.83454 3.92673 3.94432 3.99210 4.06125 4.12225 4.24232 4.33728 4.40789 4.48710 4.53455 4.59482 4.62548 4.63673 4.68256 4.74215 4.74688 4.80922 4.83309 4.85819 4.91915 4.94209 4.97087 5.09505 5.22526 5.23763 5.25151 5.32440 5.36388 5.44156 5.48387 5.57769 5.68901 6.23664 6.37250 6.41209 6.74867 7.05340 7.31750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.128 3.872 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.643 3.357 7 O -0.593 6.593 8 N -0.690 5.690 9 C 0.139 3.861 10 H 0.114 0.886 11 C -0.165 4.165 12 C 0.120 3.880 13 H 0.098 0.902 14 N -0.694 5.694 15 C 0.517 3.483 16 O -0.570 6.570 17 C 0.037 3.963 18 O -0.323 6.323 19 C 0.113 3.887 20 C -0.151 4.151 21 C -0.085 4.085 22 C -0.086 4.086 23 O -0.558 6.558 24 Si 0.796 3.204 25 C -0.155 4.155 26 C -0.070 4.070 27 C -0.203 4.203 28 C -0.129 4.129 29 H 0.063 0.937 30 H 0.085 0.915 31 H 0.065 0.935 32 H 0.068 0.932 33 H 0.098 0.902 34 H 0.070 0.930 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.059 0.941 38 H 0.418 0.582 39 H 0.102 0.898 40 H 0.062 0.938 41 H 0.421 0.579 42 H 0.123 0.877 43 H 0.130 0.870 44 H 0.110 0.890 45 H 0.099 0.901 46 H 0.396 0.604 47 H -0.282 1.282 48 H -0.301 1.301 49 H 0.152 0.848 50 H 0.164 0.836 51 H 0.161 0.839 52 H 0.102 0.898 53 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.320 5.749 1.548 10.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.238 4.238 5 O -0.285 6.285 6 C 0.396 3.604 7 O -0.484 6.484 8 N -0.349 5.349 9 C 0.036 3.964 10 H 0.132 0.868 11 C -0.205 4.205 12 C 0.014 3.986 13 H 0.116 0.884 14 N -0.348 5.348 15 C 0.303 3.697 16 O -0.448 6.448 17 C -0.041 4.041 18 O -0.237 6.237 19 C 0.068 3.932 20 C -0.170 4.170 21 C -0.086 4.086 22 C -0.195 4.195 23 O -0.366 6.366 24 Si 0.701 3.299 25 C -0.173 4.173 26 C -0.088 4.088 27 C -0.221 4.221 28 C -0.167 4.167 29 H 0.082 0.918 30 H 0.104 0.896 31 H 0.084 0.916 32 H 0.087 0.913 33 H 0.116 0.884 34 H 0.089 0.911 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.078 0.922 38 H 0.256 0.744 39 H 0.120 0.880 40 H 0.081 0.919 41 H 0.259 0.741 42 H 0.140 0.860 43 H 0.147 0.853 44 H 0.128 0.872 45 H 0.117 0.883 46 H 0.246 0.754 47 H -0.208 1.208 48 H -0.229 1.229 49 H 0.169 0.831 50 H 0.181 0.819 51 H 0.178 0.822 52 H 0.121 0.879 53 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -7.283 4.649 0.562 8.658 hybrid contribution 0.916 0.622 -0.211 1.127 sum -6.367 5.271 0.351 8.273 Atomic orbital electron populations 1.22469 0.93836 1.03799 1.03534 1.22335 0.94582 0.92487 0.81450 1.21897 1.02394 0.91014 1.04269 1.22476 1.01522 1.02292 0.97472 1.86319 1.71539 1.23441 1.47199 1.18441 0.78580 0.80689 0.82640 1.90894 1.42392 1.71007 1.44134 1.44750 1.54816 1.12213 1.23095 1.22716 0.98472 0.77046 0.98206 0.86850 1.24016 1.00148 0.97272 0.99101 1.21642 0.91939 0.87944 0.97054 0.88439 1.45369 1.16703 1.04049 1.68692 1.20533 0.88374 0.83964 0.76803 1.90771 1.24822 1.81045 1.48143 1.22730 0.95716 0.79834 1.05775 1.86121 1.39943 1.13823 1.83791 1.19194 0.90498 0.87055 0.96440 1.20301 1.00894 0.89998 1.05759 1.20212 0.94430 0.95077 0.98838 1.25429 1.08482 0.97352 0.88220 1.86481 1.41003 1.91407 1.17701 0.93562 0.82367 0.73542 0.80478 1.21219 0.94458 0.98579 1.03025 1.21350 1.00842 0.91097 0.95494 1.21640 0.92327 1.02301 1.05826 1.23714 1.04458 0.93479 0.95075 0.91825 0.89579 0.91582 0.91329 0.88387 0.91074 0.91725 0.89524 0.92174 0.74415 0.87986 0.91925 0.74083 0.85958 0.85277 0.87153 0.88323 0.75428 1.20830 1.22924 0.83132 0.81855 0.82188 0.87908 0.85983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.28 8.37 71.98 0.60 0.32 16 2 C 0.13 0.23 1.13 -10.79 -0.01 0.21 16 3 C -0.14 0.39 8.85 71.98 0.64 1.03 16 4 C -0.18 -0.45 8.37 71.98 0.60 0.15 16 5 O -0.37 -1.46 9.94 -55.56 -0.55 -2.01 16 6 C 0.64 2.85 8.06 129.79 1.05 3.90 16 7 O -0.59 -5.58 11.48 19.83 0.23 -5.35 16 8 N -0.69 1.75 5.36 -567.60 -3.04 -1.29 16 9 C 0.14 -0.68 4.12 45.52 0.19 -0.49 16 10 H 0.11 -0.37 7.46 -2.39 -0.02 -0.39 16 11 C -0.17 0.45 7.68 31.12 0.24 0.69 16 12 C 0.12 -0.47 4.32 45.52 0.20 -0.27 16 13 H 0.10 0.04 7.46 -2.39 -0.02 0.03 16 14 N -0.69 3.38 5.26 -440.03 -2.32 1.06 16 15 C 0.52 1.40 7.91 87.65 0.69 2.09 16 16 O -0.57 -8.30 16.10 16.00 0.26 -8.04 16 17 C 0.04 -0.10 5.22 71.23 0.37 0.27 16 18 O -0.32 -2.38 9.67 -73.42 -0.71 -3.09 16 19 C 0.11 0.54 6.69 22.50 0.15 0.69 16 20 C -0.15 -1.08 9.62 22.37 0.22 -0.86 16 21 C -0.09 -0.22 5.35 -19.88 -0.11 -0.33 16 22 C -0.09 -0.19 2.80 71.24 0.20 0.01 16 23 O -0.56 -1.93 12.83 -148.98 -1.91 -3.84 16 24 Si 0.80 -1.42 29.80 68.60 2.04 0.63 16 25 C -0.16 0.34 8.67 22.28 0.19 0.53 16 26 C -0.07 0.30 10.04 22.25 0.22 0.52 16 27 C -0.20 0.48 9.04 22.36 0.20 0.69 16 28 C -0.13 1.22 7.58 31.12 0.24 1.45 16 29 H 0.06 0.05 8.14 -2.38 -0.02 0.03 16 30 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 31 H 0.07 0.42 5.88 -2.39 -0.01 0.40 16 32 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 34 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 35 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 36 H 0.09 -0.07 8.14 -2.38 -0.02 -0.09 16 37 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 38 H 0.42 -2.93 8.84 -92.71 -0.82 -3.75 16 39 H 0.10 -0.33 8.14 -2.39 -0.02 -0.35 16 40 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 41 H 0.42 -4.97 8.70 -92.71 -0.81 -5.78 16 42 H 0.12 -1.03 7.66 -2.38 -0.02 -1.05 16 43 H 0.13 -1.25 7.66 -2.39 -0.02 -1.27 16 44 H 0.11 1.19 8.06 -2.91 -0.02 1.17 16 45 H 0.10 0.45 7.96 -2.39 -0.02 0.43 16 46 H 0.40 -2.12 8.70 -74.06 -0.64 -2.77 16 47 H -0.28 -0.63 7.11 99.48 0.71 0.08 16 48 H -0.30 -1.78 7.11 99.48 0.71 -1.07 16 49 H 0.15 -1.09 4.90 -2.91 -0.01 -1.10 16 50 H 0.16 -1.73 8.06 -2.91 -0.02 -1.76 16 51 H 0.16 -1.49 6.30 -2.91 -0.02 -1.51 16 52 H 0.10 -1.21 8.14 -2.39 -0.02 -1.23 16 53 H 0.12 -1.47 8.12 -2.39 -0.02 -1.49 16 Total: 0.00 -32.00 431.53 -1.39 -33.39 By element: Atomic # 1 Polarization: -20.77 SS G_CDS: -1.27 Total: -22.04 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 5.88 Total: 10.59 kcal Atomic # 7 Polarization: 5.13 SS G_CDS: -5.36 Total: -0.23 kcal Atomic # 8 Polarization: -19.66 SS G_CDS: -2.69 Total: -22.35 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: 2.04 Total: 0.63 kcal Total: -32.00 -1.39 -33.39 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_4860298.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.393 kcal (2) G-P(sol) polarization free energy of solvation -32.001 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.395 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds