Wall clock time and date at job start Sun Mar 7 2021 00:24:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53000 * 109.46934 * 2 1 4 4 C 1.52999 * 109.47050 * 240.00633 * 2 1 3 5 5 O 1.45196 * 109.47059 * 120.00099 * 2 1 3 6 6 C 1.34636 * 116.99969 * 60.00519 * 5 2 1 7 7 O 1.21511 * 120.00075 * 359.97438 * 6 5 2 8 8 N 1.34777 * 120.00328 * 179.97438 * 6 5 2 9 9 C 1.46500 * 120.00404 * 179.97438 * 8 6 5 10 10 H 1.09000 * 112.84641 * 23.80167 * 9 8 6 11 11 C 1.53785 * 113.61608 * 154.99675 * 9 8 6 12 12 C 1.53781 * 87.07861 * 89.20099 * 11 9 8 13 13 H 1.09001 * 113.61030 * 270.79867 * 12 11 9 14 14 N 1.46499 * 113.61433 * 139.98479 * 12 11 9 15 15 C 1.34777 * 120.00199 * 155.00089 * 14 12 11 16 16 O 1.21283 * 119.99750 * 359.97438 * 15 14 12 17 17 C 1.50702 * 119.99928 * 180.27479 * 15 14 12 18 18 O 1.42899 * 109.46876 * 179.72354 * 17 15 14 19 19 C 1.35919 * 116.99713 * 179.97438 * 18 17 15 20 20 C 1.38792 * 120.05890 * 179.97438 * 19 18 17 21 21 Br 1.89103 * 120.03442 * 359.97438 * 20 19 18 22 22 C 1.38231 * 119.92702 * 180.02562 * 20 19 18 23 23 C 1.38243 * 120.04859 * 0.02562 * 22 20 19 24 24 C 1.50698 * 119.93995 * 179.97438 * 23 22 20 25 25 O 1.42907 * 109.47291 * 65.00383 * 24 23 22 26 26 Si 1.86308 * 109.47057 * 185.00049 * 24 23 22 27 27 C 1.38282 * 120.11722 * 0.02562 * 23 22 20 28 28 C 1.38142 * 120.07027 * 359.67890 * 27 23 22 29 29 C 1.53780 * 113.69107 * 252.53503 * 9 8 6 30 30 H 1.09003 * 109.46573 * 299.99975 * 1 2 3 31 31 H 1.08999 * 109.47041 * 59.99397 * 1 2 3 32 32 H 1.08997 * 109.46815 * 180.02562 * 1 2 3 33 33 H 1.09000 * 109.47113 * 179.97438 * 3 2 1 34 34 H 1.08999 * 109.47749 * 300.00170 * 3 2 1 35 35 H 1.09012 * 109.46937 * 60.00306 * 3 2 1 36 36 H 1.09006 * 109.47137 * 299.99902 * 4 2 1 37 37 H 1.09002 * 109.47475 * 59.99352 * 4 2 1 38 38 H 1.08991 * 109.47273 * 180.02562 * 4 2 1 39 39 H 0.96999 * 119.99572 * 359.97438 * 8 6 5 40 40 H 1.08996 * 113.61007 * 334.65221 * 11 9 8 41 41 H 1.08990 * 113.69025 * 203.76147 * 11 9 8 42 42 H 0.97000 * 119.99484 * 334.99186 * 14 12 11 43 43 H 1.09004 * 109.46965 * 299.72211 * 17 15 14 44 44 H 1.08994 * 109.46990 * 59.72065 * 17 15 14 45 45 H 1.08007 * 119.97587 * 180.02562 * 22 20 19 46 46 H 1.09000 * 109.47700 * 305.00082 * 24 23 22 47 47 H 0.96695 * 113.99840 * 59.99587 * 25 24 23 48 48 H 1.48503 * 109.99531 * 58.68091 * 26 24 23 49 49 H 1.48492 * 109.99930 * 179.97438 * 26 24 23 50 50 H 1.07994 * 119.96391 * 179.97438 * 27 23 22 51 51 H 1.08003 * 120.02659 * 180.31261 * 28 27 23 52 52 H 1.08993 * 113.61656 * 156.32367 * 29 9 8 53 53 H 1.09004 * 113.61428 * 25.41668 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7211 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9510 -2.5095 0.5038 8 7 2.0681 -2.6658 2.4165 9 6 1.6741 -4.0670 2.5829 10 1 1.4210 -4.5504 1.6393 11 6 2.6477 -4.8818 3.4508 12 6 1.8065 -4.4479 4.6628 13 1 2.1360 -3.5099 5.1097 14 7 1.6100 -5.5110 5.6515 15 6 1.3605 -5.1969 6.9382 16 8 1.2991 -4.0341 7.2776 17 6 1.1644 -6.2905 7.9564 18 8 0.9221 -5.7091 9.2391 19 6 0.7224 -6.5644 10.2764 20 6 0.4820 -6.0682 11.5502 21 35 0.4326 -4.2010 11.8448 22 6 0.2799 -6.9405 12.6032 23 6 0.3176 -8.3056 12.3884 24 6 0.0975 -9.2544 13.5383 25 8 -1.2377 -9.1093 14.0267 26 14 0.3594 -11.0052 12.9578 27 6 0.5580 -8.8021 11.1203 28 6 0.7546 -7.9347 10.0632 29 6 0.6279 -4.2875 3.6882 30 1 -0.3632 0.5139 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 -0.3633 -1.0277 0.0005 33 1 3.1300 1.4425 0.0005 34 1 1.6767 1.9564 -0.8899 35 1 1.6766 1.9563 0.8901 36 1 1.6767 -1.7488 -1.2494 37 1 1.6766 -0.2073 -2.1393 38 1 3.1299 -0.7215 -1.2491 39 1 2.6282 -2.2371 3.0823 40 1 3.6626 -4.4844 3.4589 41 1 2.6144 -5.9539 3.2575 42 1 1.6593 -6.4409 5.3800 43 1 0.3116 -6.9056 7.6693 44 1 2.0603 -6.9097 8.0015 45 1 0.0924 -6.5553 13.5947 46 1 0.8033 -9.0271 14.3372 47 1 -1.9201 -9.2965 13.3677 48 1 1.7341 -11.1609 12.4180 49 1 0.1459 -11.9506 14.0828 50 1 0.5873 -9.8689 10.9553 51 1 0.9373 -8.3232 9.0722 52 1 0.0413 -5.1971 3.5589 53 1 0.0123 -3.4104 3.8880 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_6201210.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:38 Heat of formation + Delta-G solvation = -120.027576 kcal Electronic energy + Delta-G solvation = -35979.840130 eV Core-core repulsion = 30866.313426 eV Total energy + Delta-G solvation = -5113.526704 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 457.102 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -42.03738 -41.66376 -41.00865 -39.88466 -38.97980 -37.90656 -37.19632 -35.57843 -34.94485 -33.63490 -33.31835 -31.91520 -30.53526 -29.63394 -28.39219 -28.33122 -26.79141 -26.47928 -25.70461 -24.04549 -23.49824 -22.41072 -21.78121 -21.15861 -20.68366 -19.59574 -19.33371 -18.50577 -18.10469 -17.75125 -17.50025 -17.33599 -17.19019 -17.00379 -16.54670 -16.41798 -16.00008 -15.75695 -15.62813 -15.59027 -15.41541 -15.16955 -14.82388 -14.70514 -14.43357 -14.40794 -14.07136 -13.84606 -13.75727 -13.66825 -13.48476 -13.42476 -13.17460 -13.10546 -12.94541 -12.89716 -12.55749 -12.36004 -12.34217 -12.17874 -12.12474 -11.97455 -11.90504 -11.83921 -11.67909 -11.42586 -11.23536 -11.15548 -10.97639 -10.42082 -10.30316 -10.07878 -9.97281 -9.31790 -4.97610 -0.04991 0.12291 0.64231 1.10119 1.34260 1.44095 1.46183 1.67410 1.68629 2.02857 2.40191 2.54081 3.06738 3.31622 3.48069 3.49258 3.52156 3.67194 3.71212 3.76290 3.77002 3.81742 3.84856 3.91619 3.99331 4.05133 4.12236 4.12805 4.33366 4.42186 4.50990 4.53915 4.59012 4.63950 4.64640 4.70206 4.73874 4.75739 4.80079 4.84774 4.85285 4.86212 4.94475 4.98217 5.00726 5.10170 5.24190 5.24352 5.24981 5.33082 5.46962 5.50073 5.58624 6.07877 6.31104 6.48816 6.79779 7.17026 7.28108 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.647 3.353 7 O -0.590 6.590 8 N -0.688 5.688 9 C 0.133 3.867 10 H 0.109 0.891 11 C -0.127 4.127 12 C 0.121 3.879 13 H 0.094 0.906 14 N -0.696 5.696 15 C 0.511 3.489 16 O -0.571 6.571 17 C 0.031 3.969 18 O -0.307 6.307 19 C 0.149 3.851 20 C -0.145 4.145 21 Br -0.057 7.057 22 C -0.037 4.037 23 C -0.153 4.153 24 C -0.077 4.077 25 O -0.558 6.558 26 Si 0.789 3.211 27 C -0.053 4.053 28 C -0.188 4.188 29 C -0.162 4.162 30 H 0.058 0.942 31 H 0.088 0.912 32 H 0.065 0.935 33 H 0.070 0.930 34 H 0.099 0.901 35 H 0.066 0.934 36 H 0.065 0.935 37 H 0.087 0.913 38 H 0.063 0.937 39 H 0.414 0.586 40 H 0.091 0.909 41 H 0.136 0.864 42 H 0.425 0.575 43 H 0.134 0.866 44 H 0.133 0.867 45 H 0.134 0.866 46 H 0.103 0.897 47 H 0.396 0.604 48 H -0.276 1.276 49 H -0.305 1.305 50 H 0.168 0.832 51 H 0.183 0.817 52 H 0.117 0.883 53 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.625 -8.616 -5.843 10.536 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.286 6.286 6 C 0.400 3.600 7 O -0.480 6.480 8 N -0.347 5.347 9 C 0.028 3.972 10 H 0.127 0.873 11 C -0.165 4.165 12 C 0.016 3.984 13 H 0.112 0.888 14 N -0.350 5.350 15 C 0.297 3.703 16 O -0.449 6.449 17 C -0.046 4.046 18 O -0.219 6.219 19 C 0.101 3.899 20 C -0.225 4.225 21 Br 0.029 6.971 22 C -0.057 4.057 23 C -0.155 4.155 24 C -0.186 4.186 25 O -0.367 6.367 26 Si 0.694 3.306 27 C -0.070 4.070 28 C -0.207 4.207 29 C -0.202 4.202 30 H 0.077 0.923 31 H 0.107 0.893 32 H 0.084 0.916 33 H 0.089 0.911 34 H 0.118 0.882 35 H 0.085 0.915 36 H 0.084 0.916 37 H 0.106 0.894 38 H 0.082 0.918 39 H 0.251 0.749 40 H 0.110 0.890 41 H 0.154 0.846 42 H 0.264 0.736 43 H 0.152 0.848 44 H 0.150 0.850 45 H 0.152 0.848 46 H 0.121 0.879 47 H 0.246 0.754 48 H -0.202 1.202 49 H -0.233 1.233 50 H 0.185 0.815 51 H 0.200 0.800 52 H 0.135 0.865 53 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 1.997 -7.607 -5.332 9.502 hybrid contribution 0.318 0.475 0.710 0.912 sum 2.315 -7.132 -4.622 8.809 Atomic orbital electron populations 1.22481 0.94114 1.03747 1.03431 1.22361 0.94407 0.92563 0.81569 1.21903 1.02507 0.90999 1.04183 1.22469 1.01691 1.02310 0.97157 1.86317 1.71560 1.23347 1.47387 1.18301 0.78555 0.80767 0.82353 1.90901 1.41955 1.70848 1.44318 1.44447 1.54864 1.12287 1.23109 1.21723 0.96774 0.79101 0.99565 0.87343 1.23726 0.98751 1.02833 0.91228 1.22573 0.96838 0.92059 0.86971 0.88795 1.45597 1.71867 1.11245 1.06323 1.20592 0.75963 0.89699 0.84001 1.90796 1.50915 1.22673 1.80498 1.22902 1.06629 0.94813 0.80303 1.86252 1.85380 1.34185 1.16083 1.18811 0.94779 0.89986 0.86340 1.21278 1.15325 0.91223 0.94718 1.96760 1.97807 1.06007 1.96561 1.20873 0.94842 0.92532 0.97452 1.20371 1.05091 0.93629 0.96395 1.25291 0.87211 1.09039 0.97016 1.86492 1.14725 1.93160 1.42274 0.93814 0.82741 0.71458 0.82614 1.21262 0.94125 1.00957 0.90674 1.21593 1.06788 0.89498 1.02795 1.24015 0.97513 1.03412 0.95246 0.92276 0.89343 0.91636 0.91110 0.88203 0.91450 0.91560 0.89420 0.91841 0.74898 0.88992 0.84563 0.73620 0.84819 0.84963 0.84846 0.87938 0.75413 1.20224 1.23349 0.81487 0.79991 0.86506 0.92852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.69 8.37 71.98 0.60 -0.09 16 2 C 0.13 0.42 1.13 -10.79 -0.01 0.41 16 3 C -0.14 0.18 8.85 71.98 0.64 0.82 16 4 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 5 O -0.37 -2.26 9.94 -55.45 -0.55 -2.81 16 6 C 0.65 4.19 8.06 129.79 1.05 5.23 16 7 O -0.59 -6.51 11.48 19.81 0.23 -6.29 16 8 N -0.69 0.00 5.27 -567.61 -2.99 -2.99 16 9 C 0.13 -0.54 4.32 45.52 0.20 -0.34 16 10 H 0.11 -0.22 7.46 -2.39 -0.02 -0.23 16 11 C -0.13 1.32 7.58 31.12 0.24 1.56 16 12 C 0.12 -0.66 4.12 45.52 0.19 -0.48 16 13 H 0.09 0.01 7.46 -2.39 -0.02 -0.01 16 14 N -0.70 5.85 5.35 -440.03 -2.36 3.50 16 15 C 0.51 -0.25 7.91 87.66 0.69 0.45 16 16 O -0.57 -7.05 16.10 16.00 0.26 -6.79 16 17 C 0.03 -0.22 5.22 71.24 0.37 0.16 16 18 O -0.31 -1.08 9.01 -73.60 -0.66 -1.74 16 19 C 0.15 0.20 6.68 22.52 0.15 0.35 16 20 C -0.15 -0.77 6.24 22.40 0.14 -0.63 16 21 Br -0.06 -0.54 33.16 -20.37 -0.68 -1.22 16 22 C -0.04 -0.10 9.42 22.27 0.21 0.11 16 23 C -0.15 0.34 5.35 -19.85 -0.11 0.23 16 24 C -0.08 0.20 2.80 71.24 0.20 0.40 16 25 O -0.56 0.54 12.83 -148.98 -1.91 -1.37 16 26 Si 0.79 -4.77 29.80 68.60 2.04 -2.73 16 27 C -0.05 0.37 8.66 22.26 0.19 0.57 16 28 C -0.19 1.29 9.04 22.36 0.20 1.49 16 29 C -0.16 0.64 7.68 31.12 0.24 0.88 16 30 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 31 H 0.09 0.01 8.14 -2.39 -0.02 0.00 16 32 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 33 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 34 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 35 H 0.07 -0.06 8.14 -2.38 -0.02 -0.08 16 36 H 0.07 0.51 5.88 -2.38 -0.01 0.49 16 37 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 38 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 39 H 0.41 -1.25 8.81 -92.71 -0.82 -2.06 16 40 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 41 H 0.14 -2.17 8.12 -2.39 -0.02 -2.19 16 42 H 0.42 -7.24 8.73 -92.71 -0.81 -8.05 16 43 H 0.13 -1.93 7.65 -2.38 -0.02 -1.95 16 44 H 0.13 -1.88 7.67 -2.39 -0.02 -1.90 16 45 H 0.13 0.47 8.06 -2.91 -0.02 0.45 16 46 H 0.10 -0.07 7.96 -2.39 -0.02 -0.09 16 47 H 0.40 -3.73 8.70 -74.06 -0.64 -4.38 16 48 H -0.28 0.73 7.11 99.48 0.71 1.44 16 49 H -0.31 -0.85 7.11 99.48 0.71 -0.15 16 50 H 0.17 -2.27 4.90 -2.91 -0.01 -2.29 16 51 H 0.18 -2.87 6.30 -2.91 -0.02 -2.89 16 52 H 0.12 -0.88 8.14 -2.39 -0.02 -0.90 16 53 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 Total: 0.00 -34.64 451.95 -2.08 -36.72 By element: Atomic # 1 Polarization: -24.25 SS G_CDS: -1.25 Total: -25.49 kcal Atomic # 6 Polarization: 5.42 SS G_CDS: 5.79 Total: 11.21 kcal Atomic # 7 Polarization: 5.86 SS G_CDS: -5.35 Total: 0.51 kcal Atomic # 8 Polarization: -16.36 SS G_CDS: -2.64 Total: -19.00 kcal Atomic # 14 Polarization: -4.77 SS G_CDS: 2.04 Total: -2.73 kcal Atomic # 35 Polarization: -0.54 SS G_CDS: -0.68 Total: -1.22 kcal Total: -34.64 -2.08 -36.72 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_6201210.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.305 kcal (2) G-P(sol) polarization free energy of solvation -34.645 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.950 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.078 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.723 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds