Wall clock time and date at job start Sun Mar 7 2021 00:24:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52998 * 109.46952 * 2 1 4 4 C 1.53004 * 109.46961 * 240.00214 * 2 1 3 5 5 O 1.45199 * 109.47026 * 119.99886 * 2 1 3 6 6 C 1.34640 * 116.99746 * 60.00366 * 5 2 1 7 7 O 1.21506 * 120.00070 * 359.97438 * 6 5 2 8 8 N 1.34778 * 119.99840 * 179.97438 * 6 5 2 9 9 C 1.46500 * 119.99919 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.85132 * 25.33083 * 9 8 6 11 11 C 1.53781 * 113.61711 * 156.52821 * 9 8 6 12 12 C 1.53777 * 87.08336 * 140.06028 * 11 9 8 13 13 H 1.08996 * 113.61474 * 220.01758 * 12 11 9 14 14 N 1.46499 * 113.61160 * 89.20358 * 12 11 9 15 15 C 1.34770 * 120.00157 * 155.00230 * 14 12 11 16 16 O 1.21697 * 120.00121 * 359.97438 * 15 14 12 17 17 C 1.46684 * 120.00086 * 179.97438 * 15 14 12 18 18 C 1.37873 * 126.23259 * 180.02562 * 17 15 14 19 19 C 1.39832 * 107.08332 * 179.97438 * 18 17 15 20 20 C 1.35452 * 107.86726 * 0.02562 * 19 18 17 21 21 C 1.50695 * 125.56268 * 179.97438 * 20 19 18 22 22 O 1.42905 * 109.47204 * 245.02329 * 21 20 19 23 23 Si 1.86296 * 109.47400 * 5.02687 * 21 20 19 24 24 N 1.35528 * 108.86754 * 359.73045 * 20 19 18 25 25 C 1.53775 * 87.07992 * 334.56762 * 12 11 9 26 26 H 1.09001 * 109.46645 * 300.00113 * 1 2 3 27 27 H 1.08993 * 109.46796 * 59.99862 * 1 2 3 28 28 H 1.08997 * 109.46875 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.46988 * 180.02562 * 3 2 1 30 30 H 1.09000 * 109.47643 * 300.00035 * 3 2 1 31 31 H 1.09005 * 109.47083 * 60.00265 * 3 2 1 32 32 H 1.08999 * 109.46620 * 299.99636 * 4 2 1 33 33 H 1.08997 * 109.46920 * 59.99797 * 4 2 1 34 34 H 1.09002 * 109.46990 * 179.97438 * 4 2 1 35 35 H 0.96998 * 120.00229 * 359.97438 * 8 6 5 36 36 H 1.08997 * 113.61673 * 254.61577 * 11 9 8 37 37 H 1.09005 * 113.61396 * 25.51405 * 11 9 8 38 38 H 0.97006 * 119.99863 * 334.99879 * 14 12 11 39 39 H 1.08002 * 126.45562 * 359.97033 * 18 17 15 40 40 H 1.08002 * 126.06448 * 179.97438 * 19 18 17 41 41 H 1.09008 * 109.46811 * 125.02417 * 21 20 19 42 42 H 0.96693 * 113.99671 * 60.00154 * 22 21 20 43 43 H 1.48507 * 110.00068 * 179.97438 * 23 21 20 44 44 H 1.48496 * 109.99882 * 301.31785 * 23 21 20 45 45 H 0.97006 * 125.67898 * 180.30610 * 24 20 19 46 46 H 1.08993 * 113.61636 * 270.87622 * 25 12 11 47 47 H 1.09008 * 113.61006 * 139.97865 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9510 -2.5094 0.5040 8 7 2.0681 -2.6657 2.4166 9 6 1.6740 -4.0669 2.5831 10 1 1.4465 -4.5579 1.6369 11 6 2.6274 -4.8724 3.4814 12 6 1.3768 -5.5460 4.0706 13 1 1.4294 -5.6973 5.1488 14 7 0.9630 -6.7505 3.3467 15 6 0.2505 -7.7046 3.9778 16 8 -0.0487 -7.5659 5.1493 17 6 -0.1644 -8.9104 3.2528 18 6 -0.8926 -9.9614 3.7687 19 6 -1.0614 -10.8898 2.7367 20 6 -0.4466 -10.4009 1.6332 21 6 -0.3831 -11.0826 0.2908 22 8 0.9732 -11.4174 -0.0099 23 14 -1.4112 -12.6357 0.3337 24 7 0.0976 -9.1962 1.9321 25 6 0.6006 -4.2827 3.6629 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8899 28 1 -0.3633 -1.0276 -0.0005 29 1 3.1300 1.4425 -0.0005 30 1 1.6767 1.9564 -0.8900 31 1 1.6767 1.9563 0.8901 32 1 1.6767 -1.7489 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1301 -0.7208 -1.2495 35 1 2.6282 -2.2371 3.0825 36 1 3.2731 -5.5562 2.9305 37 1 3.1727 -4.2599 4.1995 38 1 1.2017 -6.8613 2.4130 39 1 -1.2628 -10.0507 4.7793 40 1 -1.5878 -11.8302 2.8073 41 1 -0.7704 -10.4117 -0.4761 42 1 1.3829 -12.0130 0.6322 43 1 -1.3574 -13.3170 -0.9848 44 1 -0.9131 -13.5452 1.3966 45 1 0.5910 -8.6302 1.3179 46 1 0.5917 -3.5090 4.4305 47 1 -0.3901 -4.4905 3.2584 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_6580494.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:47 Heat of formation + Delta-G solvation = -74.434328 kcal Electronic energy + Delta-G solvation = -29287.495344 eV Core-core repulsion = 25052.783755 eV Total energy + Delta-G solvation = -4234.711589 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.172 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.57462 -41.89624 -41.02451 -39.43874 -37.94325 -37.81347 -35.54717 -34.86732 -33.49086 -32.10121 -31.32439 -28.35551 -28.31852 -27.29876 -27.01014 -25.88075 -23.65267 -23.05124 -21.72744 -21.27651 -21.11536 -20.61683 -19.96625 -19.11456 -18.32605 -17.85563 -17.19230 -17.10262 -16.80652 -16.62159 -16.36502 -16.01704 -15.75245 -15.40998 -15.28308 -15.20188 -14.81685 -14.63891 -14.47470 -14.34836 -13.99713 -13.90881 -13.77123 -13.67045 -13.45282 -13.24208 -13.15252 -12.88293 -12.85635 -12.51480 -12.37542 -12.27355 -12.06691 -11.92189 -11.82421 -11.32965 -11.27901 -11.01043 -10.89494 -10.37590 -10.16137 -10.09604 -9.29991 -4.98797 0.32641 1.09419 1.15665 1.53348 1.58116 1.80168 1.82282 1.88030 2.12143 2.32907 3.05160 3.17101 3.18634 3.29075 3.51581 3.63923 3.72085 3.74569 3.77122 3.80542 3.94298 4.20237 4.25085 4.30543 4.38594 4.43844 4.48505 4.53903 4.58989 4.60292 4.67363 4.75455 4.78037 4.84542 4.87121 4.90079 4.98450 5.05486 5.06659 5.16154 5.33011 5.34214 5.43548 5.56160 5.57032 5.80417 6.15360 6.21484 6.34027 6.36869 7.05221 7.37501 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.567 6.567 8 N -0.702 5.702 9 C 0.139 3.861 10 H 0.116 0.884 11 C -0.152 4.152 12 C 0.126 3.874 13 H 0.117 0.883 14 N -0.717 5.717 15 C 0.595 3.405 16 O -0.520 6.520 17 C -0.052 4.052 18 C -0.096 4.096 19 C -0.200 4.200 20 C 0.025 3.975 21 C -0.062 4.062 22 O -0.534 6.534 23 Si 0.719 3.281 24 N -0.523 5.523 25 C -0.164 4.164 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.086 0.914 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.408 0.592 36 H 0.084 0.916 37 H 0.107 0.893 38 H 0.396 0.604 39 H 0.153 0.847 40 H 0.151 0.849 41 H 0.120 0.880 42 H 0.380 0.620 43 H -0.256 1.256 44 H -0.255 1.255 45 H 0.416 0.584 46 H 0.100 0.900 47 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.986 1.044 -1.300 1.937 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.404 3.596 7 O -0.456 6.456 8 N -0.360 5.360 9 C 0.035 3.965 10 H 0.134 0.866 11 C -0.191 4.191 12 C 0.020 3.980 13 H 0.135 0.865 14 N -0.368 5.368 15 C 0.383 3.617 16 O -0.395 6.395 17 C -0.165 4.165 18 C -0.122 4.122 19 C -0.224 4.224 20 C -0.093 4.093 21 C -0.172 4.172 22 O -0.340 6.340 23 Si 0.617 3.383 24 N -0.120 5.120 25 C -0.204 4.204 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.105 0.895 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.105 0.895 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.243 0.757 36 H 0.103 0.897 37 H 0.125 0.875 38 H 0.230 0.770 39 H 0.171 0.829 40 H 0.169 0.831 41 H 0.137 0.863 42 H 0.229 0.771 43 H -0.180 1.180 44 H -0.179 1.179 45 H 0.254 0.746 46 H 0.118 0.882 47 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.399 0.617 -1.586 1.748 hybrid contribution 1.786 0.524 -0.266 1.880 sum 2.186 1.141 -1.851 3.083 Atomic orbital electron populations 1.22522 0.93817 1.05033 1.02756 1.22125 0.94463 0.91578 0.81816 1.21882 1.02335 0.92335 1.03381 1.22522 1.01594 1.03402 0.96592 1.86312 1.71446 1.23430 1.46757 1.18172 0.78644 0.80678 0.82086 1.90909 1.40879 1.70452 1.43345 1.44725 1.55499 1.12022 1.23753 1.22652 0.95547 0.79280 0.98991 0.86602 1.23797 0.96876 0.98968 0.99427 1.21634 0.94501 0.83467 0.98399 0.86526 1.45565 1.56763 1.19921 1.14555 1.17031 0.77483 0.81028 0.86163 1.90881 1.55162 1.78237 1.15223 1.20409 1.11866 0.99469 0.84798 1.21341 0.98894 0.92042 0.99946 1.20744 1.07114 1.02205 0.92345 1.21098 1.02370 0.88067 0.97735 1.24913 0.89946 1.08826 0.93473 1.86602 1.24719 1.69204 1.53503 0.94200 0.88897 0.74636 0.80536 1.41958 1.43172 1.16932 1.09928 1.24016 0.99603 0.97758 0.99063 0.92083 0.90913 0.89461 0.91388 0.89907 0.91358 0.89494 0.90901 0.92123 0.75666 0.89690 0.87501 0.77030 0.82883 0.83124 0.86260 0.77145 1.18038 1.17876 0.74617 0.88170 0.90104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 2 C 0.14 0.15 1.13 -90.61 -0.10 0.05 16 3 C -0.14 0.12 8.85 37.16 0.33 0.45 16 4 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 5 O -0.36 -0.77 9.94 -40.32 -0.40 -1.17 16 6 C 0.65 1.49 8.06 54.06 0.44 1.92 16 7 O -0.57 -2.56 11.50 -19.28 -0.22 -2.78 16 8 N -0.70 0.60 5.37 -57.93 -0.31 0.29 16 9 C 0.14 -0.25 4.10 -67.12 -0.27 -0.53 16 10 H 0.12 -0.10 7.50 -51.93 -0.39 -0.49 16 11 C -0.15 0.54 7.57 -25.92 -0.20 0.35 16 12 C 0.13 -0.20 4.32 -67.12 -0.29 -0.49 16 13 H 0.12 -0.04 7.46 -51.93 -0.39 -0.42 16 14 N -0.72 0.87 5.26 -54.33 -0.29 0.59 16 15 C 0.59 1.18 7.79 -12.85 -0.10 1.08 16 16 O -0.52 -2.95 16.48 5.19 0.09 -2.86 16 17 C -0.05 -0.06 7.06 -81.98 -0.58 -0.63 16 18 C -0.10 -0.13 10.65 -39.12 -0.42 -0.55 16 19 C -0.20 0.05 9.32 -39.98 -0.37 -0.33 16 20 C 0.03 -0.02 6.46 -81.96 -0.53 -0.55 16 21 C -0.06 0.11 3.08 36.00 0.11 0.22 16 22 O -0.53 0.24 12.88 -35.23 -0.45 -0.22 16 23 Si 0.72 -1.60 30.56 -169.99 -5.19 -6.79 16 24 N -0.52 0.57 5.99 -5.70 -0.03 0.54 16 25 C -0.16 0.22 7.68 -25.92 -0.20 0.02 16 26 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 27 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.09 0.26 5.88 -51.93 -0.31 -0.04 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 35 H 0.41 -1.18 8.82 -40.82 -0.36 -1.54 16 36 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 37 H 0.11 -0.51 8.11 -51.93 -0.42 -0.93 16 38 H 0.40 -1.38 7.83 -40.82 -0.32 -1.70 16 39 H 0.15 0.17 8.06 -52.49 -0.42 -0.26 16 40 H 0.15 -0.30 6.19 -52.49 -0.32 -0.63 16 41 H 0.12 -0.32 7.96 -51.92 -0.41 -0.73 16 42 H 0.38 -1.11 8.70 45.56 0.40 -0.71 16 43 H -0.26 -0.26 7.11 56.52 0.40 0.15 16 44 H -0.25 0.05 7.11 56.52 0.40 0.45 16 45 H 0.42 -1.37 8.19 -40.82 -0.33 -1.70 16 46 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.08 0.02 8.14 -51.92 -0.42 -0.40 16 LS Contribution 387.02 15.07 5.83 5.83 Total: 0.00 -9.32 387.02 -9.56 -18.88 By element: Atomic # 1 Polarization: -6.51 SS G_CDS: -7.01 Total: -13.52 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: -1.56 Total: 1.23 kcal Atomic # 7 Polarization: 2.04 SS G_CDS: -0.63 Total: 1.41 kcal Atomic # 8 Polarization: -6.04 SS G_CDS: -0.99 Total: -7.03 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.19 Total: -6.79 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -9.32 -9.56 -18.88 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_6580494.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.557 kcal (2) G-P(sol) polarization free energy of solvation -9.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.560 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.877 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds