Wall clock time and date at job start Sun Mar 7 2021 00:24:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33815 * 122.44505 * 2 1 4 4 C 1.50695 * 124.52795 * 359.95937 * 3 2 1 5 5 O 1.42898 * 109.47100 * 329.99519 * 4 3 2 6 6 Si 1.86306 * 109.47063 * 209.99893 * 4 3 2 7 7 S 1.70622 * 110.94851 * 179.97438 * 3 2 1 8 8 C 1.75825 * 91.56802 * 0.02562 * 7 3 2 9 9 C 1.46578 * 125.46175 * 179.97438 * 8 7 3 10 10 O 1.21702 * 120.00160 * 180.02562 * 9 8 7 11 11 N 1.34779 * 119.99752 * 0.02562 * 9 8 7 12 12 C 1.46503 * 119.99601 * 180.02562 * 11 9 8 13 13 H 1.08994 * 112.85349 * 23.80097 * 12 11 9 14 14 C 1.53784 * 113.61053 * 155.00245 * 12 11 9 15 15 C 1.53776 * 87.08156 * 139.98155 * 14 12 11 16 16 H 1.09001 * 113.61530 * 220.01808 * 15 14 12 17 17 N 1.46500 * 113.62023 * 89.11473 * 15 14 12 18 18 C 1.34774 * 120.00241 * 155.00133 * 17 15 14 19 19 O 1.21513 * 119.99903 * 359.97438 * 18 17 15 20 20 O 1.34634 * 119.99913 * 180.02562 * 18 17 15 21 21 C 1.45207 * 116.99875 * 179.97438 * 20 18 17 22 22 C 1.52992 * 109.47178 * 59.99803 * 21 20 18 23 23 C 1.53004 * 109.47018 * 179.97438 * 21 20 18 24 24 C 1.52998 * 109.46814 * 299.99397 * 21 20 18 25 25 C 1.53779 * 87.08304 * 334.56276 * 15 14 12 26 26 C 1.36652 * 109.08060 * 359.75884 * 8 7 3 27 27 H 1.09002 * 109.47152 * 89.99941 * 1 2 3 28 28 H 1.09001 * 109.46980 * 330.00042 * 1 2 3 29 29 H 1.09004 * 109.47113 * 210.00022 * 1 2 3 30 30 H 1.09001 * 109.47440 * 89.99784 * 4 3 2 31 31 H 0.96699 * 114.00126 * 300.00895 * 5 4 3 32 32 H 1.48498 * 109.99872 * 179.97438 * 6 4 3 33 33 H 1.48494 * 109.99821 * 301.31371 * 6 4 3 34 34 H 0.96996 * 119.99998 * 359.97438 * 11 9 8 35 35 H 1.09002 * 113.60877 * 254.52340 * 14 12 11 36 36 H 1.08993 * 113.61820 * 25.42671 * 14 12 11 37 37 H 0.97003 * 119.99217 * 334.99761 * 17 15 14 38 38 H 1.09006 * 109.47797 * 59.99582 * 22 21 20 39 39 H 1.09004 * 109.47491 * 179.97438 * 22 21 20 40 40 H 1.09003 * 109.47328 * 300.00132 * 22 21 20 41 41 H 1.08996 * 109.46841 * 59.99716 * 23 21 20 42 42 H 1.08997 * 109.47248 * 180.02562 * 23 21 20 43 43 H 1.08998 * 109.46785 * 300.00203 * 23 21 20 44 44 H 1.09003 * 109.46734 * 60.00455 * 24 21 20 45 45 H 1.09004 * 109.46561 * 179.97438 * 24 21 20 46 46 H 1.08999 * 109.47337 * 299.99950 * 24 21 20 47 47 H 1.09001 * 113.61958 * 270.88839 * 25 15 14 48 48 H 1.08996 * 113.61587 * 139.98241 * 25 15 14 49 49 H 1.08003 * 123.35197 * 180.21691 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1293 0.0000 4 6 1.6355 2.5162 -0.0009 5 8 0.3758 2.4979 -0.6754 6 14 2.7931 3.6824 -0.8789 7 16 3.8969 0.7892 0.0007 8 6 3.5938 -0.9427 0.0002 9 6 4.6231 -1.9862 0.0000 10 8 4.3002 -3.1596 -0.0008 11 7 5.9273 -1.6462 0.0006 12 6 6.9562 -2.6892 -0.0002 13 1 6.5993 -3.6355 -0.4066 14 6 8.2981 -2.2302 -0.5949 15 6 8.9794 -3.0287 0.5289 16 1 9.8474 -2.5269 0.9567 17 7 9.2442 -4.4263 0.1785 18 6 10.2362 -5.0993 0.7946 19 8 10.9112 -4.5466 1.6404 20 8 10.4798 -6.3835 0.4722 21 6 11.5638 -7.0456 1.1758 22 6 11.2714 -7.0471 2.6775 23 6 11.6884 -8.4875 0.6795 24 6 12.8735 -6.3000 0.9118 25 6 7.6902 -2.8314 1.3436 26 6 2.2446 -1.1601 0.0050 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3633 0.8900 0.5138 29 1 -0.3633 -0.8900 0.5139 30 1 1.4927 2.8510 1.0266 31 1 0.4272 2.2090 -1.5967 32 1 2.2229 5.0535 -0.8871 33 1 4.1168 3.6864 -0.2059 34 1 6.1847 -0.7110 0.0009 35 1 8.4922 -2.6265 -1.5916 36 1 8.4608 -1.1546 -0.5269 37 1 8.7055 -4.8673 -0.4970 38 1 10.3382 -7.5782 2.8655 39 1 12.0849 -7.5445 3.2056 40 1 11.1823 -6.0199 3.0313 41 1 11.8964 -8.4868 -0.3904 42 1 12.5018 -8.9847 1.2079 43 1 10.7552 -9.0184 0.8678 44 1 12.7844 -5.2729 1.2657 45 1 13.6872 -6.7968 1.4404 46 1 13.0818 -6.2990 -0.1581 47 1 7.6867 -1.9202 1.9417 48 1 7.3937 -3.7130 1.9119 49 1 1.8019 -2.1452 0.0091 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941010_6739946.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:54 Heat of formation + Delta-G solvation = -89.965880 kcal Electronic energy + Delta-G solvation = -30708.524473 eV Core-core repulsion = 26343.953783 eV Total energy + Delta-G solvation = -4364.570690 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.149 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.94135 -41.18293 -40.24861 -39.47785 -37.80767 -37.34953 -35.46461 -34.87325 -33.35330 -32.01770 -30.28747 -28.31066 -28.27161 -27.23832 -26.96763 -25.50101 -24.34936 -23.43266 -21.87935 -21.06662 -20.87596 -20.13251 -19.41732 -19.18349 -18.00375 -17.54977 -17.35050 -17.18548 -16.99863 -16.56697 -16.49108 -16.04611 -16.02463 -15.50974 -15.36793 -15.21945 -14.86958 -14.62231 -14.50683 -14.33963 -14.02583 -14.00049 -13.72318 -13.60755 -13.42356 -13.24695 -13.12586 -13.09169 -13.00141 -12.83956 -12.81053 -12.49461 -12.44337 -12.29329 -12.24214 -12.04139 -11.83378 -11.75436 -11.28535 -11.10087 -10.96778 -10.77167 -10.32549 -10.12838 -9.71692 -9.48620 -5.23328 -0.66384 0.23881 0.65838 1.03423 1.14557 1.28840 1.41339 1.78533 1.86390 1.97735 2.12827 3.07453 3.17545 3.19287 3.33944 3.50451 3.66576 3.71098 3.79214 3.84615 3.85162 3.98801 4.06768 4.21116 4.36092 4.38225 4.45862 4.48055 4.54870 4.58316 4.64113 4.64833 4.68813 4.77328 4.79942 4.81821 4.85896 4.88505 4.92436 4.94801 5.00518 5.10373 5.21497 5.35181 5.36960 5.38121 5.42483 5.48536 5.60965 6.29217 6.33464 6.38972 7.04780 7.41718 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.091 4.091 3 C -0.236 4.236 4 C -0.028 4.028 5 O -0.529 6.529 6 Si 0.659 3.341 7 S 0.193 5.807 8 C -0.264 4.264 9 C 0.594 3.406 10 O -0.524 6.524 11 N -0.717 5.717 12 C 0.123 3.877 13 H 0.120 0.880 14 C -0.152 4.152 15 C 0.142 3.858 16 H 0.116 0.884 17 N -0.696 5.696 18 C 0.654 3.346 19 O -0.564 6.564 20 O -0.364 6.364 21 C 0.137 3.863 22 C -0.184 4.184 23 C -0.142 4.142 24 C -0.184 4.184 25 C -0.166 4.166 26 C -0.045 4.045 27 H 0.073 0.927 28 H 0.084 0.916 29 H 0.062 0.938 30 H 0.124 0.876 31 H 0.381 0.619 32 H -0.234 1.234 33 H -0.237 1.237 34 H 0.400 0.600 35 H 0.087 0.913 36 H 0.106 0.894 37 H 0.408 0.592 38 H 0.060 0.940 39 H 0.072 0.928 40 H 0.087 0.913 41 H 0.067 0.933 42 H 0.082 0.918 43 H 0.067 0.933 44 H 0.087 0.913 45 H 0.072 0.928 46 H 0.060 0.940 47 H 0.099 0.901 48 H 0.081 0.919 49 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.682 2.328 -3.776 4.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.104 4.104 3 C -0.355 4.355 4 C -0.141 4.141 5 O -0.335 6.335 6 Si 0.559 3.441 7 S 0.461 5.539 8 C -0.384 4.384 9 C 0.381 3.619 10 O -0.401 6.401 11 N -0.368 5.368 12 C 0.018 3.982 13 H 0.138 0.862 14 C -0.191 4.191 15 C 0.037 3.963 16 H 0.134 0.866 17 N -0.355 5.355 18 C 0.408 3.592 19 O -0.453 6.453 20 O -0.278 6.278 21 C 0.100 3.900 22 C -0.242 4.242 23 C -0.199 4.199 24 C -0.241 4.241 25 C -0.206 4.206 26 C -0.078 4.078 27 H 0.091 0.909 28 H 0.103 0.897 29 H 0.081 0.919 30 H 0.141 0.859 31 H 0.229 0.771 32 H -0.157 1.157 33 H -0.161 1.161 34 H 0.234 0.766 35 H 0.106 0.894 36 H 0.124 0.876 37 H 0.243 0.757 38 H 0.079 0.921 39 H 0.091 0.909 40 H 0.106 0.894 41 H 0.086 0.914 42 H 0.101 0.899 43 H 0.086 0.914 44 H 0.106 0.894 45 H 0.091 0.909 46 H 0.079 0.921 47 H 0.117 0.883 48 H 0.099 0.901 49 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 2.486 3.515 -2.697 5.080 hybrid contribution -1.608 -0.954 0.303 1.894 sum 0.878 2.561 -2.394 3.614 Atomic orbital electron populations 1.20648 0.88490 1.03397 1.02898 1.18728 0.98494 0.90476 1.02664 1.24473 0.98354 1.00965 1.11702 1.24474 0.92270 0.95292 1.02031 1.86533 1.27694 1.90022 1.29258 0.94809 0.78175 0.80773 0.90380 1.83001 1.03375 0.98281 1.69194 1.24566 0.98006 0.97035 1.18794 1.16981 0.81687 0.87436 0.75836 1.90861 1.81585 1.18198 1.49497 1.45817 1.05253 1.09940 1.75797 1.22706 0.85698 0.92730 0.97059 0.86233 1.23795 0.94097 1.01710 0.99512 1.21574 0.98494 0.79902 0.96350 0.86591 1.44355 1.35044 1.12267 1.43811 1.18041 0.80400 0.80668 0.80123 1.90920 1.50421 1.69351 1.34573 1.86312 1.53666 1.24022 1.63836 1.22132 0.84136 0.91917 0.91789 1.22525 1.02447 1.05042 0.94144 1.21881 1.03223 0.92361 1.02459 1.22523 0.95865 1.03296 1.02427 1.24022 0.95239 1.03881 0.97427 1.20753 0.90922 1.00178 0.95970 0.90876 0.89682 0.91903 0.85876 0.77086 1.15726 1.16130 0.76551 0.89409 0.87584 0.75682 0.92089 0.90911 0.89426 0.91370 0.89911 0.91363 0.89430 0.90914 0.92093 0.88256 0.90066 0.82709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.10 8.67 36.01 0.31 0.41 16 2 C -0.09 0.00 5.75 -106.45 -0.61 -0.61 16 3 C -0.24 0.19 5.53 -35.86 -0.20 -0.01 16 4 C -0.03 0.05 2.76 36.00 0.10 0.15 16 5 O -0.53 0.91 9.86 -35.23 -0.35 0.56 16 6 Si 0.66 -1.56 31.32 -169.99 -5.32 -6.88 16 7 S 0.19 -0.25 19.78 -107.50 -2.13 -2.37 16 8 C -0.26 -0.26 6.45 -36.79 -0.24 -0.50 16 9 C 0.59 1.30 7.78 -12.90 -0.10 1.20 16 10 O -0.52 -3.04 16.44 5.19 0.09 -2.96 16 11 N -0.72 0.64 5.35 -54.35 -0.29 0.35 16 12 C 0.12 -0.17 4.12 -67.11 -0.28 -0.45 16 13 H 0.12 -0.01 7.46 -51.93 -0.39 -0.40 16 14 C -0.15 0.52 7.58 -25.92 -0.20 0.33 16 15 C 0.14 -0.19 4.32 -67.12 -0.29 -0.48 16 16 H 0.12 -0.05 7.47 -51.93 -0.39 -0.43 16 17 N -0.70 0.13 5.27 -57.94 -0.31 -0.18 16 18 C 0.65 1.80 8.06 54.05 0.44 2.24 16 19 O -0.56 -2.78 11.48 -19.28 -0.22 -3.00 16 20 O -0.36 -0.93 9.94 -40.31 -0.40 -1.33 16 21 C 0.14 0.20 1.13 -90.62 -0.10 0.10 16 22 C -0.18 -0.29 8.37 37.15 0.31 0.02 16 23 C -0.14 0.07 8.85 37.16 0.33 0.40 16 24 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 25 C -0.17 0.18 7.68 -25.92 -0.20 -0.02 16 26 C -0.05 -0.05 9.79 -40.43 -0.40 -0.45 16 27 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.08 -0.03 6.42 -51.93 -0.33 -0.36 16 29 H 0.06 -0.06 8.13 -51.93 -0.42 -0.49 16 30 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 31 H 0.38 -1.93 8.66 45.56 0.39 -1.54 16 32 H -0.23 -0.13 7.11 56.52 0.40 0.27 16 33 H -0.24 0.19 7.09 56.52 0.40 0.59 16 34 H 0.40 -1.23 7.84 -40.82 -0.32 -1.55 16 35 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 36 H 0.11 -0.52 8.12 -51.93 -0.42 -0.94 16 37 H 0.41 -0.75 8.81 -40.82 -0.36 -1.11 16 38 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 39 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 42 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 43 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 44 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 45 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 46 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 47 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 48 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 49 H 0.16 0.17 8.06 -52.48 -0.42 -0.25 16 LS Contribution 409.11 15.07 6.17 6.17 Total: 0.00 -8.26 409.11 -11.11 -19.37 By element: Atomic # 1 Polarization: -4.59 SS G_CDS: -7.53 Total: -12.13 kcal Atomic # 6 Polarization: 3.21 SS G_CDS: -0.81 Total: 2.40 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -0.60 Total: 0.17 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -0.88 Total: -6.72 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.32 Total: -6.88 kcal Atomic # 16 Polarization: -0.25 SS G_CDS: -2.13 Total: -2.37 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -8.26 -11.11 -19.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_6739946.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.595 kcal (2) G-P(sol) polarization free energy of solvation -8.263 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.108 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.371 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.966 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds