Wall clock time and date at job start Sun Mar 7 2021 00:24:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33815 * 122.44505 * 2 1 4 4 C 1.50695 * 124.52795 * 359.95937 * 3 2 1 5 5 O 1.42898 * 109.47100 * 329.99519 * 4 3 2 6 6 Si 1.86306 * 109.47063 * 209.99893 * 4 3 2 7 7 S 1.70622 * 110.94851 * 179.97438 * 3 2 1 8 8 C 1.75825 * 91.56802 * 0.02562 * 7 3 2 9 9 C 1.46578 * 125.46175 * 179.97438 * 8 7 3 10 10 O 1.21702 * 120.00160 * 180.02562 * 9 8 7 11 11 N 1.34779 * 119.99752 * 0.02562 * 9 8 7 12 12 C 1.46503 * 119.99601 * 180.02562 * 11 9 8 13 13 H 1.08994 * 112.85349 * 23.80097 * 12 11 9 14 14 C 1.53784 * 113.61053 * 155.00245 * 12 11 9 15 15 C 1.53776 * 87.08156 * 139.98155 * 14 12 11 16 16 H 1.09001 * 113.61530 * 220.01808 * 15 14 12 17 17 N 1.46500 * 113.62023 * 89.11473 * 15 14 12 18 18 C 1.34774 * 120.00241 * 155.00133 * 17 15 14 19 19 O 1.21513 * 119.99903 * 359.97438 * 18 17 15 20 20 O 1.34634 * 119.99913 * 180.02562 * 18 17 15 21 21 C 1.45207 * 116.99875 * 179.97438 * 20 18 17 22 22 C 1.52992 * 109.47178 * 59.99803 * 21 20 18 23 23 C 1.53004 * 109.47018 * 179.97438 * 21 20 18 24 24 C 1.52998 * 109.46814 * 299.99397 * 21 20 18 25 25 C 1.53779 * 87.08304 * 334.56276 * 15 14 12 26 26 C 1.36652 * 109.08060 * 359.75884 * 8 7 3 27 27 H 1.09002 * 109.47152 * 89.99941 * 1 2 3 28 28 H 1.09001 * 109.46980 * 330.00042 * 1 2 3 29 29 H 1.09004 * 109.47113 * 210.00022 * 1 2 3 30 30 H 1.09001 * 109.47440 * 89.99784 * 4 3 2 31 31 H 0.96699 * 114.00126 * 300.00895 * 5 4 3 32 32 H 1.48498 * 109.99872 * 179.97438 * 6 4 3 33 33 H 1.48494 * 109.99821 * 301.31371 * 6 4 3 34 34 H 0.96996 * 119.99998 * 359.97438 * 11 9 8 35 35 H 1.09002 * 113.60877 * 254.52340 * 14 12 11 36 36 H 1.08993 * 113.61820 * 25.42671 * 14 12 11 37 37 H 0.97003 * 119.99217 * 334.99761 * 17 15 14 38 38 H 1.09006 * 109.47797 * 59.99582 * 22 21 20 39 39 H 1.09004 * 109.47491 * 179.97438 * 22 21 20 40 40 H 1.09003 * 109.47328 * 300.00132 * 22 21 20 41 41 H 1.08996 * 109.46841 * 59.99716 * 23 21 20 42 42 H 1.08997 * 109.47248 * 180.02562 * 23 21 20 43 43 H 1.08998 * 109.46785 * 300.00203 * 23 21 20 44 44 H 1.09003 * 109.46734 * 60.00455 * 24 21 20 45 45 H 1.09004 * 109.46561 * 179.97438 * 24 21 20 46 46 H 1.08999 * 109.47337 * 299.99950 * 24 21 20 47 47 H 1.09001 * 113.61958 * 270.88839 * 25 15 14 48 48 H 1.08996 * 113.61587 * 139.98241 * 25 15 14 49 49 H 1.08003 * 123.35197 * 180.21691 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1293 0.0000 4 6 1.6355 2.5162 -0.0009 5 8 0.3758 2.4979 -0.6754 6 14 2.7931 3.6824 -0.8789 7 16 3.8969 0.7892 0.0007 8 6 3.5938 -0.9427 0.0002 9 6 4.6231 -1.9862 0.0000 10 8 4.3002 -3.1596 -0.0008 11 7 5.9273 -1.6462 0.0006 12 6 6.9562 -2.6892 -0.0002 13 1 6.5993 -3.6355 -0.4066 14 6 8.2981 -2.2302 -0.5949 15 6 8.9794 -3.0287 0.5289 16 1 9.8474 -2.5269 0.9567 17 7 9.2442 -4.4263 0.1785 18 6 10.2362 -5.0993 0.7946 19 8 10.9112 -4.5466 1.6404 20 8 10.4798 -6.3835 0.4722 21 6 11.5638 -7.0456 1.1758 22 6 11.2714 -7.0471 2.6775 23 6 11.6884 -8.4875 0.6795 24 6 12.8735 -6.3000 0.9118 25 6 7.6902 -2.8314 1.3436 26 6 2.2446 -1.1601 0.0050 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3633 0.8900 0.5138 29 1 -0.3633 -0.8900 0.5139 30 1 1.4927 2.8510 1.0266 31 1 0.4272 2.2090 -1.5967 32 1 2.2229 5.0535 -0.8871 33 1 4.1168 3.6864 -0.2059 34 1 6.1847 -0.7110 0.0009 35 1 8.4922 -2.6265 -1.5916 36 1 8.4608 -1.1546 -0.5269 37 1 8.7055 -4.8673 -0.4970 38 1 10.3382 -7.5782 2.8655 39 1 12.0849 -7.5445 3.2056 40 1 11.1823 -6.0199 3.0313 41 1 11.8964 -8.4868 -0.3904 42 1 12.5018 -8.9847 1.2079 43 1 10.7552 -9.0184 0.8678 44 1 12.7844 -5.2729 1.2657 45 1 13.6872 -6.7968 1.4404 46 1 13.0818 -6.2990 -0.1581 47 1 7.6867 -1.9202 1.9417 48 1 7.3937 -3.7130 1.9119 49 1 1.8019 -2.1452 0.0091 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_6739946.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:53 Heat of formation + Delta-G solvation = -89.570731 kcal Electronic energy + Delta-G solvation = -30708.507338 eV Core-core repulsion = 26343.953783 eV Total energy + Delta-G solvation = -4364.553555 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.149 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.03792 -41.26787 -40.22276 -39.51670 -37.93713 -37.27072 -35.60338 -34.97072 -33.41634 -31.98986 -30.20809 -28.38894 -28.32527 -27.23953 -26.83413 -25.46341 -24.35079 -23.47980 -21.94004 -21.18070 -20.84161 -20.08274 -19.46503 -19.24428 -18.00531 -17.59279 -17.33291 -17.26038 -17.07117 -16.56257 -16.43607 -16.08725 -16.03873 -15.59875 -15.43451 -15.29354 -14.87371 -14.58027 -14.47327 -14.40746 -13.97933 -13.95360 -13.59330 -13.52218 -13.40186 -13.20899 -13.14439 -13.05749 -12.96050 -12.94178 -12.89178 -12.55959 -12.43667 -12.35246 -12.23928 -12.01386 -11.78880 -11.69725 -11.42386 -11.26658 -11.15544 -10.66909 -10.35377 -10.17444 -9.67822 -9.42108 -5.05773 -0.68300 0.26923 0.68759 1.08997 1.11049 1.32078 1.54934 1.68219 1.90636 1.97638 2.03687 3.05896 3.27848 3.37067 3.44591 3.60472 3.71226 3.71666 3.76292 3.79551 3.92054 3.95117 4.09776 4.26324 4.39765 4.44744 4.51170 4.59165 4.59270 4.61977 4.64994 4.70419 4.74402 4.79621 4.83381 4.85188 4.85490 4.90364 4.92026 4.93977 5.01860 5.09822 5.21730 5.24958 5.30808 5.39356 5.44427 5.47866 5.56888 6.29255 6.32939 6.67278 6.98562 7.28118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C -0.100 4.100 3 C -0.235 4.235 4 C -0.032 4.032 5 O -0.540 6.540 6 Si 0.731 3.269 7 S 0.240 5.760 8 C -0.284 4.284 9 C 0.591 3.409 10 O -0.570 6.570 11 N -0.702 5.702 12 C 0.119 3.881 13 H 0.105 0.895 14 C -0.130 4.130 15 C 0.138 3.862 16 H 0.109 0.891 17 N -0.687 5.687 18 C 0.647 3.353 19 O -0.590 6.590 20 O -0.370 6.370 21 C 0.127 3.873 22 C -0.181 4.181 23 C -0.138 4.138 24 C -0.179 4.179 25 C -0.164 4.164 26 C -0.056 4.056 27 H 0.085 0.915 28 H 0.079 0.921 29 H 0.059 0.941 30 H 0.121 0.879 31 H 0.396 0.604 32 H -0.275 1.275 33 H -0.252 1.252 34 H 0.412 0.588 35 H 0.098 0.902 36 H 0.130 0.870 37 H 0.416 0.584 38 H 0.059 0.941 39 H 0.088 0.912 40 H 0.064 0.936 41 H 0.070 0.930 42 H 0.099 0.901 43 H 0.067 0.933 44 H 0.065 0.935 45 H 0.087 0.913 46 H 0.063 0.937 47 H 0.110 0.890 48 H 0.058 0.942 49 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.274 3.232 -4.665 5.816 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.113 4.113 3 C -0.354 4.354 4 C -0.144 4.144 5 O -0.348 6.348 6 Si 0.633 3.367 7 S 0.509 5.491 8 C -0.404 4.404 9 C 0.378 3.622 10 O -0.451 6.451 11 N -0.353 5.353 12 C 0.014 3.986 13 H 0.123 0.877 14 C -0.168 4.168 15 C 0.033 3.967 16 H 0.127 0.873 17 N -0.346 5.346 18 C 0.401 3.599 19 O -0.481 6.481 20 O -0.285 6.285 21 C 0.091 3.909 22 C -0.238 4.238 23 C -0.195 4.195 24 C -0.236 4.236 25 C -0.204 4.204 26 C -0.090 4.090 27 H 0.103 0.897 28 H 0.098 0.902 29 H 0.078 0.922 30 H 0.138 0.862 31 H 0.246 0.754 32 H -0.201 1.201 33 H -0.178 1.178 34 H 0.250 0.750 35 H 0.117 0.883 36 H 0.149 0.851 37 H 0.253 0.747 38 H 0.078 0.922 39 H 0.106 0.894 40 H 0.083 0.917 41 H 0.089 0.911 42 H 0.118 0.882 43 H 0.086 0.914 44 H 0.084 0.916 45 H 0.106 0.894 46 H 0.082 0.918 47 H 0.128 0.872 48 H 0.077 0.923 49 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 3.083 4.428 -3.611 6.492 hybrid contribution -1.815 -1.167 0.616 2.244 sum 1.268 3.260 -2.995 4.605 Atomic orbital electron populations 1.20626 0.87957 1.02913 1.03562 1.18766 0.98964 0.90281 1.03255 1.24686 0.98850 1.01198 1.10715 1.24621 0.92675 0.94851 1.02300 1.86508 1.27642 1.90064 1.30576 0.93976 0.75968 0.77686 0.89058 1.82758 1.02514 0.95800 1.68024 1.24570 0.97747 0.98397 1.19712 1.17220 0.82658 0.87054 0.75267 1.90831 1.82373 1.20030 1.51907 1.45731 1.04402 1.10798 1.74385 1.22720 0.86307 0.92371 0.97209 0.87716 1.23741 0.91254 1.02735 0.99069 1.21654 0.98037 0.79464 0.97545 0.87277 1.44409 1.34181 1.12657 1.43335 1.18288 0.80758 0.80768 0.80111 1.90905 1.51536 1.69843 1.35779 1.86318 1.54135 1.23968 1.64051 1.22371 0.83908 0.92967 0.91688 1.22479 1.03031 1.03673 0.94590 1.21896 1.03888 0.90928 1.02812 1.22469 0.96357 1.02124 1.02677 1.24022 0.95437 1.03443 0.97495 1.20808 0.91356 1.00310 0.96542 0.89672 0.90211 0.92239 0.86152 0.75370 1.20066 1.17778 0.75035 0.88323 0.85146 0.74728 0.92214 0.89368 0.91719 0.91068 0.88234 0.91385 0.91630 0.89445 0.91799 0.87167 0.92269 0.83695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.17 8.67 71.24 0.62 0.79 16 2 C -0.10 -0.01 5.75 -21.05 -0.12 -0.13 16 3 C -0.23 0.52 5.53 24.68 0.14 0.66 16 4 C -0.03 0.13 2.76 71.23 0.20 0.33 16 5 O -0.54 2.26 9.86 -148.98 -1.47 0.79 16 6 Si 0.73 -4.11 31.32 68.60 2.15 -1.97 16 7 S 0.24 -0.83 19.78 -56.49 -1.12 -1.95 16 8 C -0.28 -0.69 6.45 24.08 0.16 -0.54 16 9 C 0.59 3.14 7.78 86.42 0.67 3.81 16 10 O -0.57 -7.81 16.44 -4.35 -0.07 -7.88 16 11 N -0.70 1.32 5.35 -444.07 -2.38 -1.05 16 12 C 0.12 -0.30 4.12 45.52 0.19 -0.12 16 13 H 0.10 0.11 7.46 -2.39 -0.02 0.09 16 14 C -0.13 1.03 7.58 31.12 0.24 1.27 16 15 C 0.14 -0.34 4.32 45.52 0.20 -0.14 16 16 H 0.11 -0.05 7.47 -2.39 -0.02 -0.06 16 17 N -0.69 -0.34 5.27 -567.62 -2.99 -3.33 16 18 C 0.65 4.41 8.06 129.79 1.05 5.45 16 19 O -0.59 -6.85 11.48 19.80 0.23 -6.62 16 20 O -0.37 -2.25 9.94 -55.44 -0.55 -2.80 16 21 C 0.13 0.43 1.13 -10.80 -0.01 0.42 16 22 C -0.18 -0.72 8.37 71.98 0.60 -0.12 16 23 C -0.14 0.20 8.85 71.98 0.64 0.84 16 24 C -0.18 -0.55 8.37 71.98 0.60 0.06 16 25 C -0.16 0.24 7.68 31.12 0.24 0.48 16 26 C -0.06 -0.18 9.79 21.72 0.21 0.03 16 27 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 28 H 0.08 -0.05 6.42 -2.39 -0.02 -0.06 16 29 H 0.06 -0.08 8.13 -2.38 -0.02 -0.09 16 30 H 0.12 -0.40 7.96 -2.39 -0.02 -0.42 16 31 H 0.40 -4.44 8.66 -74.06 -0.64 -5.08 16 32 H -0.27 -0.36 7.11 99.48 0.71 0.35 16 33 H -0.25 0.77 7.09 99.48 0.71 1.47 16 34 H 0.41 -3.03 7.84 -92.71 -0.73 -3.76 16 35 H 0.10 -0.91 8.14 -2.39 -0.02 -0.93 16 36 H 0.13 -1.61 8.12 -2.39 -0.02 -1.63 16 37 H 0.42 -1.24 8.81 -92.71 -0.82 -2.06 16 38 H 0.06 0.23 8.14 -2.38 -0.02 0.21 16 39 H 0.09 0.03 8.14 -2.38 -0.02 0.01 16 40 H 0.06 0.59 5.88 -2.39 -0.01 0.57 16 41 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 42 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 43 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 44 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 45 H 0.09 -0.03 8.14 -2.38 -0.02 -0.05 16 46 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 47 H 0.11 -0.41 8.14 -2.39 -0.02 -0.43 16 48 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 49 H 0.15 0.65 8.06 -2.91 -0.02 0.62 16 Total: 0.00 -21.60 409.11 -1.74 -23.34 By element: Atomic # 1 Polarization: -10.47 SS G_CDS: -1.15 Total: -11.62 kcal Atomic # 6 Polarization: 7.49 SS G_CDS: 5.61 Total: 13.09 kcal Atomic # 7 Polarization: 0.98 SS G_CDS: -5.37 Total: -4.38 kcal Atomic # 8 Polarization: -14.65 SS G_CDS: -1.86 Total: -16.52 kcal Atomic # 14 Polarization: -4.11 SS G_CDS: 2.15 Total: -1.97 kcal Atomic # 16 Polarization: -0.83 SS G_CDS: -1.12 Total: -1.95 kcal Total: -21.60 -1.74 -23.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_6739946.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.230 kcal (2) G-P(sol) polarization free energy of solvation -21.601 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.739 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.341 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds