Wall clock time and date at job start Sun Mar 7 2021 00:25:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.37935 * 120.07477 * 2 1 4 4 C 1.38384 * 120.14283 * 179.97438 * 3 2 1 5 5 C 1.50704 * 119.85243 * 180.02562 * 4 3 2 6 6 C 1.38338 * 120.29445 * 0.02562 * 4 3 2 7 7 C 1.50693 * 119.92619 * 180.02562 * 6 4 3 8 8 O 1.42904 * 109.47399 * 284.99821 * 7 6 4 9 9 Si 1.86298 * 109.47167 * 164.99776 * 7 6 4 10 10 C 1.37978 * 120.14308 * 359.78551 * 6 4 3 11 11 C 1.39555 * 119.85114 * 0.44288 * 10 6 4 12 12 C 1.47849 * 120.14076 * 179.81367 * 11 10 6 13 13 O 1.21554 * 119.99954 * 173.71360 * 12 11 10 14 14 N 1.34774 * 120.00144 * 353.71200 * 12 11 10 15 15 C 1.46503 * 120.00082 * 179.97438 * 14 12 11 16 16 H 1.08999 * 112.90654 * 336.25343 * 15 14 12 17 17 C 1.53787 * 113.61191 * 107.50345 * 15 14 12 18 18 C 1.53789 * 87.07646 * 139.98209 * 17 15 14 19 19 H 1.09003 * 113.68379 * 220.00324 * 18 17 15 20 20 N 1.46500 * 113.61257 * 89.11907 * 18 17 15 21 21 C 1.34775 * 119.99798 * 107.22554 * 20 18 17 22 22 O 1.21511 * 120.00492 * 359.97438 * 21 20 18 23 23 O 1.34639 * 119.99890 * 180.02562 * 21 20 18 24 24 C 1.45197 * 117.00097 * 180.02562 * 23 21 20 25 25 C 1.52999 * 109.47452 * 59.99334 * 24 23 21 26 26 C 1.53005 * 109.47053 * 179.97438 * 24 23 21 27 27 C 1.53001 * 109.46873 * 299.99426 * 24 23 21 28 28 C 1.53777 * 87.08244 * 334.56401 * 18 17 15 29 29 H 1.08999 * 109.47264 * 263.48482 * 1 2 3 30 30 H 1.09002 * 109.46726 * 23.48557 * 1 2 3 31 31 H 1.08995 * 109.47450 * 143.48195 * 1 2 3 32 32 H 1.08000 * 119.92776 * 359.97354 * 3 2 1 33 33 H 1.08996 * 109.47174 * 90.00119 * 5 4 3 34 34 H 1.09000 * 109.47071 * 210.00628 * 5 4 3 35 35 H 1.09003 * 109.46651 * 329.99953 * 5 4 3 36 36 H 1.09003 * 109.47644 * 44.99908 * 7 6 4 37 37 H 0.96698 * 113.99909 * 300.00557 * 8 7 6 38 38 H 1.48503 * 109.99804 * 58.68253 * 9 7 6 39 39 H 1.48497 * 110.00295 * 179.97438 * 9 7 6 40 40 H 1.08005 * 120.07410 * 180.23411 * 10 6 4 41 41 H 0.97004 * 120.00020 * 0.02562 * 14 12 11 42 42 H 1.08998 * 113.61398 * 25.43678 * 17 15 14 43 43 H 1.08996 * 113.61558 * 254.52650 * 17 15 14 44 44 H 0.96997 * 119.99603 * 287.50116 * 20 18 17 45 45 H 1.09004 * 109.46804 * 60.00311 * 25 24 23 46 46 H 1.09001 * 109.47246 * 179.97438 * 25 24 23 47 47 H 1.08998 * 109.46932 * 300.00367 * 25 24 23 48 48 H 1.09000 * 109.47232 * 59.99727 * 26 24 23 49 49 H 1.08995 * 109.46929 * 179.97438 * 26 24 23 50 50 H 1.09002 * 109.46713 * 299.99794 * 26 24 23 51 51 H 1.08998 * 109.47116 * 59.99875 * 27 24 23 52 52 H 1.09001 * 109.46759 * 180.02562 * 27 24 23 53 53 H 1.09000 * 109.47241 * 300.00168 * 27 24 23 54 54 H 1.09006 * 113.60847 * 139.97652 * 28 18 17 55 55 H 1.08994 * 113.61815 * 270.88714 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5821 1.1953 0.0005 5 6 4.3307 2.5033 0.0011 6 6 4.2813 0.0017 0.0005 7 6 5.7882 0.0131 0.0017 8 8 6.2630 0.3660 -1.2992 9 14 6.4218 -1.6789 0.4561 10 6 3.6020 -1.1993 0.0045 11 6 2.2065 -1.2080 -0.0009 12 6 1.4721 -2.4912 -0.0009 13 8 0.2616 -2.4987 0.1097 14 7 2.1447 -3.6527 -0.1235 15 6 1.4171 -4.9242 -0.1230 16 1 0.4502 -4.8595 0.3761 17 6 1.3538 -5.5983 -1.5037 18 6 1.5807 -6.9334 -0.7750 19 1 2.2539 -7.6105 -1.3009 20 7 0.3413 -7.5847 -0.3439 21 6 -0.0998 -8.6852 -0.9848 22 8 0.5303 -9.1370 -1.9204 23 8 -1.2392 -9.2835 -0.5890 24 6 -1.6535 -10.4647 -1.3248 25 6 -0.5679 -11.5377 -1.2202 26 6 -2.9591 -11.0014 -0.7344 27 6 -1.8701 -10.0999 -2.7948 28 6 2.2679 -6.1206 0.3349 29 1 -0.3634 -0.1166 1.0210 30 1 -0.3633 0.9426 -0.4096 31 1 -0.3634 -0.8258 -0.6115 32 1 1.6583 2.1290 -0.0004 33 1 4.5108 2.8183 1.0289 34 1 5.2837 2.3766 -0.5125 35 1 3.7389 3.2608 -0.5128 36 1 6.1455 0.7422 0.7290 37 1 5.9827 -0.2407 -1.9980 38 1 5.9156 -2.6870 -0.5097 39 1 7.9067 -1.6810 0.4602 40 1 4.1491 -2.1306 0.0083 41 1 3.1108 -3.6467 -0.2115 42 1 2.1734 -5.3170 -2.1649 43 1 0.3775 -5.5226 -1.9823 44 1 -0.1640 -7.2215 0.4002 45 1 -0.4137 -11.7976 -0.1729 46 1 -0.8792 -12.4245 -1.7722 47 1 0.3623 -11.1555 -1.6405 48 1 -3.7327 -10.2371 -0.8086 49 1 -3.2703 -11.8878 -1.2870 50 1 -2.8044 -11.2613 0.3129 51 1 -0.9398 -9.7177 -3.2151 52 1 -2.1816 -10.9865 -3.3470 53 1 -2.6435 -9.3354 -2.8693 54 1 2.0292 -6.4664 1.3408 55 1 3.3373 -5.9820 0.1764 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_9599494.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:25:05 Heat of formation + Delta-G solvation = -94.571208 kcal Electronic energy + Delta-G solvation = -35003.734645 eV Core-core repulsion = 30394.274387 eV Total energy + Delta-G solvation = -4609.460257 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.208 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.07066 -41.67278 -40.64457 -39.55432 -37.97845 -37.66634 -35.66141 -35.06833 -34.38877 -33.78045 -32.72663 -29.36052 -28.58139 -28.39062 -28.32375 -26.81246 -26.09351 -25.40773 -23.79786 -23.57620 -22.33690 -21.30167 -21.12295 -20.50030 -19.37103 -19.04192 -17.88047 -17.57799 -17.49572 -17.21426 -16.78033 -16.53163 -16.40300 -16.28613 -16.06238 -15.74263 -15.61907 -15.40698 -15.06617 -14.87121 -14.62736 -14.56777 -14.36421 -14.10003 -14.00920 -13.80071 -13.54376 -13.51000 -13.37160 -13.16131 -13.06624 -13.05630 -12.94266 -12.89200 -12.78523 -12.68916 -12.54950 -12.52589 -12.34768 -11.98171 -11.94232 -11.76433 -11.66376 -11.42192 -11.15485 -10.70049 -10.56091 -10.31488 -10.11726 -9.89142 -9.59702 -4.91317 -0.24325 0.17919 1.09523 1.30323 1.54961 1.68186 1.72889 1.97486 2.07924 2.64264 3.06649 3.30742 3.42622 3.47757 3.49600 3.62995 3.70199 3.71720 3.76746 3.81529 3.82865 3.92056 3.97927 4.16190 4.24242 4.41411 4.51224 4.52743 4.56097 4.58473 4.59223 4.63388 4.66709 4.69147 4.74353 4.75463 4.78738 4.80170 4.80816 4.85268 4.85624 4.91980 4.93535 4.96127 5.05206 5.10676 5.16547 5.24312 5.24941 5.28318 5.34997 5.48009 5.50679 5.52195 5.58876 5.81694 6.32137 6.44585 6.50380 7.13900 7.28728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.026 4.026 3 C -0.138 4.138 4 C -0.029 4.029 5 C -0.127 4.127 6 C -0.134 4.134 7 C -0.081 4.081 8 O -0.543 6.543 9 Si 0.755 3.245 10 C -0.072 4.072 11 C -0.159 4.159 12 C 0.558 3.442 13 O -0.562 6.562 14 N -0.705 5.705 15 C 0.121 3.879 16 H 0.106 0.894 17 C -0.164 4.164 18 C 0.137 3.863 19 H 0.106 0.894 20 N -0.686 5.686 21 C 0.647 3.353 22 O -0.591 6.591 23 O -0.370 6.370 24 C 0.127 3.873 25 C -0.179 4.179 26 C -0.138 4.138 27 C -0.180 4.180 28 C -0.131 4.131 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.076 0.924 32 H 0.143 0.857 33 H 0.087 0.913 34 H 0.077 0.923 35 H 0.074 0.926 36 H 0.124 0.876 37 H 0.386 0.614 38 H -0.260 1.260 39 H -0.303 1.303 40 H 0.148 0.852 41 H 0.412 0.588 42 H 0.107 0.893 43 H 0.058 0.942 44 H 0.416 0.584 45 H 0.063 0.937 46 H 0.087 0.913 47 H 0.064 0.936 48 H 0.067 0.933 49 H 0.099 0.901 50 H 0.070 0.930 51 H 0.064 0.936 52 H 0.087 0.913 53 H 0.059 0.941 54 H 0.099 0.901 55 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.086 -0.132 3.755 4.298 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.027 4.027 3 C -0.155 4.155 4 C -0.030 4.030 5 C -0.183 4.183 6 C -0.134 4.134 7 C -0.189 4.189 8 O -0.352 6.352 9 Si 0.659 3.341 10 C -0.090 4.090 11 C -0.162 4.162 12 C 0.347 3.653 13 O -0.442 6.442 14 N -0.357 5.357 15 C 0.016 3.984 16 H 0.123 0.877 17 C -0.204 4.204 18 C 0.032 3.968 19 H 0.124 0.876 20 N -0.345 5.345 21 C 0.400 3.600 22 O -0.481 6.481 23 O -0.285 6.285 24 C 0.091 3.909 25 C -0.236 4.236 26 C -0.195 4.195 27 C -0.238 4.238 28 C -0.169 4.169 29 H 0.090 0.910 30 H 0.089 0.911 31 H 0.095 0.905 32 H 0.161 0.839 33 H 0.106 0.894 34 H 0.096 0.904 35 H 0.093 0.907 36 H 0.142 0.858 37 H 0.235 0.765 38 H -0.185 1.185 39 H -0.231 1.231 40 H 0.166 0.834 41 H 0.250 0.750 42 H 0.125 0.875 43 H 0.077 0.923 44 H 0.253 0.747 45 H 0.082 0.918 46 H 0.105 0.895 47 H 0.083 0.917 48 H 0.086 0.914 49 H 0.117 0.883 50 H 0.089 0.911 51 H 0.083 0.917 52 H 0.106 0.894 53 H 0.078 0.922 54 H 0.117 0.883 55 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.205 -0.656 3.448 4.144 hybrid contribution -0.104 0.495 -1.187 1.290 sum 2.101 -0.160 2.261 3.090 Atomic orbital electron populations 1.21021 0.90249 1.03054 1.03150 1.20216 0.96904 0.92065 0.93483 1.21186 0.93762 0.97954 1.02636 1.20232 0.93384 0.95972 0.93385 1.21006 1.00718 0.92966 1.03606 1.20088 0.96421 0.92628 1.04255 1.25182 0.91110 1.14456 0.88196 1.86584 1.76372 1.55102 1.17095 0.94222 0.77487 0.73451 0.88947 1.21320 0.92527 0.98470 0.96697 1.19664 0.93794 0.92786 1.09953 1.18471 0.86815 0.84491 0.75516 1.90738 1.15074 1.87512 1.50882 1.45807 1.11218 1.04907 1.73739 1.22644 0.97347 0.81485 0.96887 0.87653 1.24012 1.03239 0.95395 0.97783 1.21668 0.84554 0.93027 0.97591 0.87564 1.44401 1.26684 1.26691 1.36723 1.18297 0.79873 0.80824 0.80959 1.90905 1.59554 1.66696 1.30980 1.86316 1.39012 1.43557 1.59580 1.22366 0.95902 0.81274 0.91371 1.22469 0.99413 0.98775 1.02980 1.21898 0.93323 1.01996 1.02309 1.22478 1.02916 1.03315 0.95061 1.23742 1.01513 0.92086 0.99599 0.90972 0.91051 0.90511 0.83903 0.89412 0.90397 0.90725 0.85777 0.76485 1.18541 1.23124 0.83445 0.75015 0.87478 0.92346 0.74704 0.91802 0.89458 0.91661 0.91361 0.88251 0.91061 0.91736 0.89390 0.92189 0.88291 0.85305 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.51 8.74 71.24 0.62 0.11 16 2 C -0.03 -0.09 5.91 -19.61 -0.12 -0.20 16 3 C -0.14 -0.09 9.31 22.23 0.21 0.12 16 4 C -0.03 0.02 5.89 -19.80 -0.12 -0.10 16 5 C -0.13 0.39 9.31 71.24 0.66 1.05 16 6 C -0.13 0.31 5.26 -19.90 -0.10 0.20 16 7 C -0.08 0.32 1.88 71.23 0.13 0.45 16 8 O -0.54 0.59 11.92 -148.98 -1.78 -1.18 16 9 Si 0.75 -4.61 30.23 68.60 2.07 -2.54 16 10 C -0.07 0.21 8.13 22.53 0.18 0.39 16 11 C -0.16 -0.31 5.87 -20.09 -0.12 -0.43 16 12 C 0.56 2.04 7.70 86.79 0.67 2.70 16 13 O -0.56 -5.87 12.94 -3.88 -0.05 -5.92 16 14 N -0.71 2.18 5.30 -442.89 -2.35 -0.17 16 15 C 0.12 -0.42 4.12 45.52 0.19 -0.23 16 16 H 0.11 -0.01 7.47 -2.39 -0.02 -0.03 16 17 C -0.16 0.30 7.68 31.13 0.24 0.54 16 18 C 0.14 -0.36 4.32 45.52 0.20 -0.16 16 19 H 0.11 -0.03 7.47 -2.39 -0.02 -0.05 16 20 N -0.69 -0.17 5.27 -567.60 -2.99 -3.16 16 21 C 0.65 4.32 8.06 129.79 1.05 5.37 16 22 O -0.59 -6.85 11.48 19.80 0.23 -6.62 16 23 O -0.37 -2.19 9.94 -55.48 -0.55 -2.74 16 24 C 0.13 0.42 1.13 -10.79 -0.01 0.41 16 25 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 26 C -0.14 0.22 8.85 71.98 0.64 0.86 16 27 C -0.18 -0.70 8.37 71.98 0.60 -0.10 16 28 C -0.13 1.10 7.58 31.12 0.24 1.33 16 29 H 0.07 0.36 8.14 -2.39 -0.02 0.34 16 30 H 0.07 0.08 8.04 -2.39 -0.02 0.06 16 31 H 0.08 0.65 5.84 -2.39 -0.01 0.64 16 32 H 0.14 -0.33 8.06 -2.91 -0.02 -0.36 16 33 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 34 H 0.08 -0.11 6.18 -2.39 -0.01 -0.12 16 35 H 0.07 -0.29 8.08 -2.39 -0.02 -0.30 16 36 H 0.12 -0.64 7.38 -2.39 -0.02 -0.66 16 37 H 0.39 -2.48 8.70 -74.06 -0.64 -3.12 16 38 H -0.26 1.53 6.69 99.48 0.67 2.20 16 39 H -0.30 -0.75 7.11 99.48 0.71 -0.04 16 40 H 0.15 -1.19 3.25 -2.91 -0.01 -1.20 16 41 H 0.41 -3.50 6.80 -92.71 -0.63 -4.13 16 42 H 0.11 -0.40 8.14 -2.39 -0.02 -0.42 16 43 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 44 H 0.42 -1.39 8.81 -92.71 -0.82 -2.20 16 45 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 46 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 47 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 48 H 0.07 -0.10 8.14 -2.39 -0.02 -0.11 16 49 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 50 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 51 H 0.06 0.58 5.88 -2.39 -0.01 0.57 16 52 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 53 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 54 H 0.10 -0.96 8.14 -2.38 -0.02 -0.98 16 55 H 0.13 -1.63 8.12 -2.39 -0.02 -1.65 16 Total: 0.00 -20.93 431.01 -0.81 -21.74 By element: Atomic # 1 Polarization: -10.62 SS G_CDS: -1.15 Total: -11.78 kcal Atomic # 6 Polarization: 6.62 SS G_CDS: 5.76 Total: 12.38 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -5.34 Total: -3.32 kcal Atomic # 8 Polarization: -14.32 SS G_CDS: -2.15 Total: -16.47 kcal Atomic # 14 Polarization: -4.61 SS G_CDS: 2.07 Total: -2.54 kcal Total: -20.93 -0.81 -21.74 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_9599494.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.835 kcal (2) G-P(sol) polarization free energy of solvation -20.927 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.762 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.809 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.736 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds