Wall clock time and date at job start Sun Mar 7 2021 00:25:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36770 * 125.80618 * 2 1 4 4 C 1.47272 * 126.93801 * 359.97438 * 3 2 1 5 5 O 1.21628 * 119.99673 * 359.71032 * 4 3 2 6 6 N 1.34770 * 119.99835 * 179.70850 * 4 3 2 7 7 C 1.46500 * 120.00035 * 180.02562 * 6 4 3 8 8 H 1.09006 * 112.85002 * 23.80304 * 7 6 4 9 9 C 1.53780 * 113.61454 * 154.99899 * 7 6 4 10 10 C 1.53778 * 87.08089 * 89.20358 * 9 7 6 11 11 H 1.09004 * 113.61522 * 270.79868 * 10 9 7 12 12 N 1.46499 * 113.61783 * 139.98334 * 10 9 7 13 13 C 1.34777 * 120.00199 * 156.52956 * 12 10 9 14 14 O 1.21513 * 119.99898 * 359.97438 * 13 12 10 15 15 O 1.34638 * 119.99834 * 180.27541 * 13 12 10 16 16 C 1.45201 * 116.99819 * 179.72501 * 15 13 12 17 17 C 1.52997 * 109.47346 * 59.99666 * 16 15 13 18 18 C 1.53000 * 109.47187 * 179.97438 * 16 15 13 19 19 C 1.52997 * 109.46698 * 299.99554 * 16 15 13 20 20 C 1.53782 * 87.17671 * 25.38924 * 10 9 7 21 21 C 1.46680 * 106.12091 * 179.72593 * 3 2 1 22 22 C 1.34487 * 106.33261 * 0.23716 * 21 3 2 23 23 C 1.50703 * 125.57687 * 179.97438 * 22 21 3 24 24 O 1.42895 * 109.46950 * 65.00148 * 23 22 21 25 25 Si 1.86299 * 109.47180 * 185.00324 * 23 22 21 26 26 N 1.34658 * 125.80126 * 180.13494 * 2 1 3 27 27 H 1.08998 * 109.46899 * 89.99404 * 1 2 3 28 28 H 1.08997 * 109.47232 * 209.99935 * 1 2 3 29 29 H 1.09002 * 109.46888 * 330.00154 * 1 2 3 30 30 H 0.97000 * 119.99948 * 0.02562 * 6 4 3 31 31 H 1.08993 * 113.61537 * 334.65295 * 9 7 6 32 32 H 1.09007 * 113.61121 * 203.74572 * 9 7 6 33 33 H 0.97001 * 120.00074 * 336.52060 * 12 10 9 34 34 H 1.08997 * 109.47392 * 59.99802 * 17 16 15 35 35 H 1.08999 * 109.47056 * 180.02562 * 17 16 15 36 36 H 1.08999 * 109.47175 * 299.99773 * 17 16 15 37 37 H 1.08997 * 109.47042 * 59.99813 * 18 16 15 38 38 H 1.08999 * 109.47303 * 179.97438 * 18 16 15 39 39 H 1.09003 * 109.46990 * 300.00104 * 18 16 15 40 40 H 1.08999 * 109.47400 * 60.00485 * 19 16 15 41 41 H 1.09013 * 109.46945 * 180.02562 * 19 16 15 42 42 H 1.08997 * 109.47343 * 300.00072 * 19 16 15 43 43 H 1.08993 * 113.61558 * 89.15586 * 20 10 9 44 44 H 1.08995 * 113.61588 * 220.06513 * 20 10 9 45 45 H 1.08001 * 126.83878 * 180.22787 * 21 3 2 46 46 H 1.09000 * 109.46734 * 305.00581 * 23 22 21 47 47 H 0.96705 * 114.00038 * 59.99814 * 24 23 22 48 48 H 1.48496 * 109.99968 * 58.68308 * 25 23 22 49 49 H 1.48500 * 109.99400 * 179.97438 * 25 23 22 50 50 H 0.97001 * 124.85477 * 0.06881 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3072 1.1092 0.0000 4 6 1.8703 2.5156 -0.0005 5 8 0.6840 2.7839 -0.0064 6 7 2.7850 3.5053 0.0055 7 6 2.3505 4.9044 0.0055 8 1 1.3453 5.0354 0.4062 9 6 3.3844 5.8706 0.6076 10 6 3.9715 5.9996 -0.8078 11 1 4.7397 5.2592 -1.0311 12 7 4.3795 7.3640 -1.1518 13 6 5.3079 7.5691 -2.1071 14 8 5.8068 6.6224 -2.6827 15 8 5.6868 8.8228 -2.4193 16 6 6.6956 8.9682 -3.4535 17 6 6.1802 8.3575 -4.7582 18 6 6.9946 10.4531 -3.6692 19 6 7.9746 8.2472 -3.0232 20 6 2.5785 5.6211 -1.3379 21 6 3.6882 0.6151 0.0067 22 6 3.6096 -0.7274 0.0049 23 6 4.7819 -1.6744 0.0094 24 8 5.5043 -1.5321 1.2341 25 14 4.1663 -3.4256 -0.1487 26 7 2.2947 -1.0921 -0.0026 27 1 -0.3633 0.0001 -1.0277 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3633 0.8900 0.5138 30 1 3.7311 3.2913 0.0098 31 1 4.0609 5.3979 1.3195 32 1 2.9491 6.7957 0.9857 33 1 3.9814 8.1197 -0.6922 34 1 5.2690 8.8710 -5.0647 35 1 6.9377 8.4663 -5.5344 36 1 5.9670 7.2996 -4.6049 37 1 7.3616 10.8885 -2.7398 38 1 7.7521 10.5623 -4.4452 39 1 6.0832 10.9664 -3.9759 40 1 7.7614 7.1893 -2.8699 41 1 8.7322 8.3567 -3.7994 42 1 8.3418 8.6823 -2.0937 43 1 1.9225 6.4777 -1.4926 44 1 2.6054 4.9472 -2.1942 45 1 4.5891 1.2108 0.0120 46 1 5.4390 -1.4431 -0.8289 47 1 4.9803 -1.7228 2.0243 48 1 3.3864 -3.5785 -1.4030 49 1 5.3131 -4.3691 -0.1460 50 1 1.9734 -2.0074 -0.0057 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941010_9865296.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:25:12 Heat of formation + Delta-G solvation = -81.806590 kcal Electronic energy + Delta-G solvation = -31405.318677 eV Core-core repulsion = 27014.749783 eV Total energy + Delta-G solvation = -4390.568894 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.50666 -41.93948 -40.95055 -39.37564 -37.93527 -37.70577 -35.57231 -34.81789 -33.43606 -32.79745 -31.85433 -28.92413 -28.39470 -28.32317 -26.79536 -26.49031 -25.32410 -23.69195 -22.98764 -21.62744 -21.28275 -20.75879 -20.41495 -19.16724 -18.68898 -18.05496 -17.61896 -17.20820 -17.02600 -17.00277 -16.53687 -16.41153 -15.88657 -15.78719 -15.48157 -15.38417 -14.99589 -14.95709 -14.53854 -14.48342 -14.36669 -14.09801 -13.89646 -13.76361 -13.52067 -13.37930 -13.36240 -13.15017 -13.09758 -12.93268 -12.88783 -12.68027 -12.56089 -12.55829 -12.31933 -12.25050 -11.93853 -11.65049 -11.41522 -11.14421 -10.99309 -10.48690 -10.25982 -10.09804 -9.82411 -9.17105 -5.16582 0.68357 1.13646 1.15942 1.23220 1.50670 1.71494 1.83884 2.01030 2.35975 2.49346 3.13449 3.35497 3.43329 3.50668 3.70603 3.72020 3.77164 3.84051 3.87592 3.92204 3.97350 4.07167 4.23276 4.43189 4.43916 4.50603 4.55014 4.58546 4.66248 4.70850 4.72626 4.73998 4.74751 4.79598 4.83347 4.85393 4.85421 4.94183 4.97270 5.04786 5.10422 5.23757 5.24521 5.27818 5.36196 5.56749 5.62099 5.67899 5.84912 6.38666 6.42410 6.60541 6.71892 7.31481 7.32567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.121 3.879 3 C -0.267 4.267 4 C 0.591 3.409 5 O -0.581 6.581 6 N -0.703 5.703 7 C 0.124 3.876 8 H 0.103 0.897 9 C -0.130 4.130 10 C 0.139 3.861 11 H 0.104 0.896 12 N -0.688 5.688 13 C 0.642 3.358 14 O -0.595 6.595 15 O -0.369 6.369 16 C 0.127 3.873 17 C -0.180 4.180 18 C -0.138 4.138 19 C -0.180 4.180 20 C -0.163 4.163 21 C -0.140 4.140 22 C -0.023 4.023 23 C -0.040 4.040 24 O -0.549 6.549 25 Si 0.769 3.231 26 N -0.533 5.533 27 H 0.080 0.920 28 H 0.095 0.905 29 H 0.084 0.916 30 H 0.410 0.590 31 H 0.095 0.905 32 H 0.125 0.875 33 H 0.419 0.581 34 H 0.061 0.939 35 H 0.086 0.914 36 H 0.062 0.938 37 H 0.070 0.930 38 H 0.098 0.902 39 H 0.069 0.931 40 H 0.063 0.937 41 H 0.086 0.914 42 H 0.063 0.937 43 H 0.105 0.895 44 H 0.057 0.943 45 H 0.153 0.847 46 H 0.120 0.880 47 H 0.396 0.604 48 H -0.279 1.279 49 H -0.291 1.291 50 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.365 -0.825 3.763 3.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.001 3.999 3 C -0.277 4.277 4 C 0.382 3.618 5 O -0.463 6.463 6 N -0.354 5.354 7 C 0.018 3.982 8 H 0.121 0.879 9 C -0.169 4.169 10 C 0.035 3.965 11 H 0.122 0.878 12 N -0.347 5.347 13 C 0.396 3.604 14 O -0.486 6.486 15 O -0.284 6.284 16 C 0.091 3.909 17 C -0.238 4.238 18 C -0.195 4.195 19 C -0.237 4.237 20 C -0.203 4.203 21 C -0.164 4.164 22 C -0.132 4.132 23 C -0.151 4.151 24 O -0.356 6.356 25 Si 0.674 3.326 26 N -0.133 5.133 27 H 0.099 0.901 28 H 0.114 0.886 29 H 0.102 0.898 30 H 0.246 0.754 31 H 0.114 0.886 32 H 0.144 0.856 33 H 0.257 0.743 34 H 0.080 0.920 35 H 0.105 0.895 36 H 0.081 0.919 37 H 0.089 0.911 38 H 0.116 0.884 39 H 0.088 0.912 40 H 0.082 0.918 41 H 0.105 0.895 42 H 0.082 0.918 43 H 0.123 0.877 44 H 0.076 0.924 45 H 0.171 0.829 46 H 0.138 0.862 47 H 0.247 0.753 48 H -0.206 1.206 49 H -0.218 1.218 50 H 0.269 0.731 Dipole moment (debyes) X Y Z Total from point charges -0.386 -1.753 2.564 3.130 hybrid contribution 0.553 0.271 -0.508 0.798 sum 0.167 -1.482 2.056 2.540 Atomic orbital electron populations 1.20630 0.85874 1.04965 1.03932 1.20582 0.94357 0.85514 0.99418 1.20176 0.94073 0.91788 1.21643 1.17572 0.84966 0.84865 0.74384 1.90726 1.17894 1.84906 1.52795 1.45403 1.09998 1.04857 1.75109 1.21638 0.99881 0.80083 0.96627 0.87886 1.23713 0.97330 1.00706 0.95118 1.22661 0.95422 0.81916 0.96488 0.87804 1.44743 1.41255 1.10249 1.38495 1.18448 0.79755 0.81830 0.80372 1.90903 1.58865 1.43295 1.55535 1.86314 1.57395 1.28060 1.56628 1.22340 0.85451 0.98247 0.84847 1.22475 1.02405 1.02238 0.96653 1.21892 1.03290 0.90599 1.03695 1.22473 0.96671 1.01805 1.02755 1.24027 0.97292 1.01036 0.97959 1.21956 0.95435 0.93343 1.05702 1.20668 0.84825 0.95572 1.12138 1.24615 0.92253 1.07507 0.90698 1.86521 1.40523 1.92924 1.15619 0.94357 0.81631 0.72267 0.84386 1.41667 1.05078 1.08818 1.57777 0.90140 0.88635 0.89760 0.75419 0.88620 0.85641 0.74331 0.92022 0.89495 0.91905 0.91066 0.88356 0.91207 0.91787 0.89532 0.91813 0.87677 0.92413 0.82926 0.86227 0.75338 1.20560 1.21763 0.73092 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.04 9.88 71.24 0.70 0.74 16 2 C 0.12 0.21 7.17 41.78 0.30 0.51 16 3 C -0.27 -1.30 6.29 -19.04 -0.12 -1.42 16 4 C 0.59 4.48 7.81 86.62 0.68 5.16 16 5 O -0.58 -7.87 14.42 -4.12 -0.06 -7.92 16 6 N -0.70 -1.29 5.26 -443.15 -2.33 -3.63 16 7 C 0.12 -0.03 4.33 45.58 0.20 0.17 16 8 H 0.10 0.25 7.46 -2.38 -0.02 0.23 16 9 C -0.13 0.73 7.58 31.12 0.24 0.97 16 10 C 0.14 -0.12 4.09 45.52 0.19 0.06 16 11 H 0.10 0.24 7.50 -2.38 -0.02 0.22 16 12 N -0.69 -0.17 5.37 -567.60 -3.05 -3.21 16 13 C 0.64 4.54 8.06 129.79 1.05 5.59 16 14 O -0.60 -7.50 11.50 19.80 0.23 -7.27 16 15 O -0.37 -2.17 9.94 -55.48 -0.55 -2.72 16 16 C 0.13 0.45 1.13 -10.80 -0.01 0.44 16 17 C -0.18 -0.76 8.37 71.98 0.60 -0.16 16 18 C -0.14 0.22 8.85 71.98 0.64 0.86 16 19 C -0.18 -0.66 8.37 71.98 0.60 -0.05 16 20 C -0.16 -0.10 7.69 31.18 0.24 0.14 16 21 C -0.14 -0.24 10.45 23.62 0.25 0.01 16 22 C -0.02 0.03 6.09 40.98 0.25 0.28 16 23 C -0.04 0.13 2.98 71.24 0.21 0.34 16 24 O -0.55 1.34 12.88 -148.98 -1.92 -0.58 16 25 Si 0.77 -4.42 30.96 68.60 2.12 -2.29 16 26 N -0.53 1.66 5.41 -171.06 -0.93 0.74 16 27 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 28 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 29 H 0.08 0.37 6.47 -2.39 -0.02 0.35 16 30 H 0.41 -0.67 7.83 -92.71 -0.73 -1.40 16 31 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 32 H 0.13 -1.19 8.11 -2.38 -0.02 -1.21 16 33 H 0.42 -2.02 8.82 -92.71 -0.82 -2.84 16 34 H 0.06 0.22 8.14 -2.39 -0.02 0.21 16 35 H 0.09 0.06 8.14 -2.39 -0.02 0.04 16 36 H 0.06 0.61 5.88 -2.39 -0.01 0.60 16 37 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 38 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 39 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 40 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 41 H 0.09 0.02 8.14 -2.38 -0.02 0.00 16 42 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 43 H 0.10 -0.12 8.14 -2.39 -0.02 -0.14 16 44 H 0.06 0.30 8.14 -2.39 -0.02 0.29 16 45 H 0.15 -0.10 7.70 -2.91 -0.02 -0.12 16 46 H 0.12 -0.25 7.96 -2.39 -0.02 -0.27 16 47 H 0.40 -4.08 8.70 -74.05 -0.64 -4.73 16 48 H -0.28 0.30 7.11 99.48 0.71 1.01 16 49 H -0.29 -0.66 7.11 99.48 0.71 0.05 16 50 H 0.43 -3.91 6.72 -92.71 -0.62 -4.53 16 Total: 0.00 -24.68 405.82 -2.25 -26.92 By element: Atomic # 1 Polarization: -11.91 SS G_CDS: -1.77 Total: -13.68 kcal Atomic # 6 Polarization: 7.64 SS G_CDS: 6.00 Total: 13.65 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -6.30 Total: -6.10 kcal Atomic # 8 Polarization: -16.20 SS G_CDS: -2.30 Total: -18.50 kcal Atomic # 14 Polarization: -4.42 SS G_CDS: 2.12 Total: -2.29 kcal Total: -24.68 -2.25 -26.92 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941010_9865296.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.883 kcal (2) G-P(sol) polarization free energy of solvation -24.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.560 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.246 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.924 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds