Wall clock time and date at job start Sun Mar 7 2021 00:25:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52994 * 109.47396 * 2 1 4 4 C 1.52999 * 109.46782 * 240.00063 * 2 1 3 5 5 O 1.45202 * 109.47322 * 120.00150 * 2 1 3 6 6 C 1.34637 * 116.99987 * 59.99776 * 5 2 1 7 7 O 1.21517 * 119.99884 * 359.97438 * 6 5 2 8 8 N 1.34773 * 120.00455 * 179.97438 * 6 5 2 9 9 C 1.46491 * 120.00459 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.85396 * 336.20268 * 9 8 6 11 11 C 1.53952 * 113.66785 * 107.44214 * 9 8 6 12 12 C 1.53777 * 87.02637 * 139.93302 * 11 9 8 13 13 H 1.09003 * 113.61002 * 89.22655 * 12 11 9 14 14 N 1.46494 * 113.62143 * 220.05346 * 12 11 9 15 15 C 1.34776 * 119.99799 * 254.13645 * 14 12 11 16 16 O 1.21695 * 120.00501 * 359.97438 * 15 14 12 17 17 C 1.46686 * 119.99990 * 179.97438 * 15 14 12 18 18 C 1.37867 * 126.23121 * 180.32762 * 17 15 14 19 19 C 1.39839 * 107.08492 * 180.11842 * 18 17 15 20 20 C 1.50699 * 126.07121 * 179.83966 * 19 18 17 21 21 O 1.42892 * 109.47249 * 299.71987 * 20 19 18 22 22 Si 1.86298 * 109.47032 * 179.71372 * 20 19 18 23 23 C 1.35458 * 107.85823 * 359.58023 * 19 18 17 24 24 N 1.35524 * 108.87651 * 0.26251 * 23 19 18 25 25 C 1.53781 * 113.61872 * 205.00393 * 9 8 6 26 26 H 1.09003 * 109.46722 * 299.99595 * 1 2 3 27 27 H 1.08999 * 109.47371 * 59.99876 * 1 2 3 28 28 H 1.09001 * 109.47025 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.47512 * 179.97438 * 3 2 1 30 30 H 1.08999 * 109.46962 * 300.00374 * 3 2 1 31 31 H 1.09002 * 109.47167 * 60.00039 * 3 2 1 32 32 H 1.09001 * 109.47204 * 299.99723 * 4 2 1 33 33 H 1.08998 * 109.47077 * 60.00456 * 4 2 1 34 34 H 1.09000 * 109.47152 * 179.97438 * 4 2 1 35 35 H 0.97004 * 119.99348 * 0.02562 * 8 6 5 36 36 H 1.09008 * 113.61422 * 25.41494 * 11 9 8 37 37 H 1.09003 * 113.67355 * 254.46794 * 11 9 8 38 38 H 0.97004 * 120.00036 * 74.13236 * 14 12 11 39 39 H 1.08003 * 126.46208 * 359.96301 * 18 17 15 40 40 H 1.09004 * 109.46453 * 59.72055 * 20 19 18 41 41 H 0.96703 * 114.00176 * 299.99748 * 21 20 19 42 42 H 1.48506 * 109.99834 * 58.68765 * 22 20 19 43 43 H 1.48502 * 110.00011 * 180.02562 * 22 20 19 44 44 H 1.08002 * 125.55536 * 180.24322 * 23 19 18 45 45 H 0.96998 * 125.68306 * 180.02562 * 24 23 19 46 46 H 1.08996 * 113.61498 * 105.47053 * 25 9 8 47 47 H 1.09005 * 113.61086 * 334.56695 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5040 8 7 2.0681 -2.6658 2.4165 9 6 1.6740 -4.0669 2.5830 10 1 0.7592 -4.3161 2.0453 11 6 2.8216 -5.0645 2.3426 12 6 2.2736 -5.8601 3.5390 13 1 1.5233 -6.6013 3.2636 14 7 3.3183 -6.4046 4.4099 15 6 3.5977 -7.7228 4.3840 16 8 2.9821 -8.4609 3.6376 17 6 4.6441 -8.2679 5.2556 18 6 5.0380 -9.5871 5.3290 19 6 6.0557 -9.6593 6.2853 20 6 6.7907 -10.9057 6.7064 21 8 5.8612 -11.8478 7.2452 22 14 8.0571 -10.4719 8.0022 23 6 6.2675 -8.4091 6.7618 24 7 5.4162 -7.5544 6.1442 25 6 1.6755 -4.5375 4.0471 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.1300 1.4424 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6766 -1.7489 -1.2492 33 1 1.6766 -0.2074 -2.1392 34 1 3.1299 -0.7209 -1.2496 35 1 2.6277 -2.2369 3.0827 36 1 3.8113 -4.6416 2.5160 37 1 2.7479 -5.5962 1.3939 38 1 3.8088 -5.8163 5.0051 39 1 4.6347 -10.4101 4.7577 40 1 7.2906 -11.3422 5.8417 41 1 5.3788 -11.5259 8.0190 42 1 7.3917 -9.8466 9.1733 43 1 8.7893 -11.6926 8.4254 44 1 6.9959 -8.1379 7.5117 45 1 5.3604 -6.5990 6.3017 46 1 0.6777 -4.6444 4.4724 47 1 2.3512 -3.9703 4.6873 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_10543058.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:25:20 Heat of formation + Delta-G solvation = -74.030052 kcal Electronic energy + Delta-G solvation = -28756.623777 eV Core-core repulsion = 24521.929718 eV Total energy + Delta-G solvation = -4234.694059 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.172 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.54659 -41.86450 -40.92806 -39.44240 -37.84951 -37.75757 -35.55474 -34.92576 -33.57432 -32.48921 -30.72070 -28.34801 -28.30212 -27.01405 -26.94464 -25.91236 -24.13451 -22.75715 -21.67672 -21.22953 -20.93188 -20.77484 -19.92419 -19.09605 -18.14671 -17.57105 -17.25317 -17.10465 -16.99134 -16.49800 -16.28755 -16.00385 -15.77088 -15.53111 -15.39753 -15.28574 -14.79750 -14.65690 -14.44387 -14.32147 -13.92877 -13.82440 -13.79041 -13.48531 -13.44422 -13.15780 -12.88750 -12.84595 -12.63264 -12.53604 -12.42653 -12.41317 -12.22332 -12.07976 -11.83090 -11.32038 -11.17587 -10.98897 -10.52675 -10.36657 -10.14333 -9.98465 -9.35420 -4.98000 0.36218 1.12304 1.29031 1.51912 1.58242 1.83431 1.87872 1.98108 2.01534 2.31393 3.05777 3.18688 3.30050 3.48379 3.63481 3.66017 3.72639 3.75958 3.81448 3.85670 3.95413 3.99331 4.30807 4.35713 4.39177 4.40323 4.54548 4.61380 4.61440 4.63800 4.71658 4.76535 4.82247 4.86392 4.87193 4.91620 4.92700 5.02388 5.06535 5.19025 5.31567 5.35260 5.44421 5.55058 5.57010 5.75898 6.14816 6.32993 6.36983 6.53088 7.06417 7.38543 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.650 3.350 7 O -0.564 6.564 8 N -0.701 5.701 9 C 0.144 3.856 10 H 0.126 0.874 11 C -0.166 4.166 12 C 0.129 3.871 13 H 0.125 0.875 14 N -0.721 5.721 15 C 0.592 3.408 16 O -0.521 6.521 17 C -0.060 4.060 18 C -0.074 4.074 19 C -0.209 4.209 20 C -0.040 4.040 21 O -0.530 6.530 22 Si 0.682 3.318 23 C 0.037 3.963 24 N -0.536 5.536 25 C -0.153 4.153 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.406 0.594 36 H 0.090 0.910 37 H 0.084 0.916 38 H 0.395 0.605 39 H 0.151 0.849 40 H 0.116 0.884 41 H 0.374 0.626 42 H -0.260 1.260 43 H -0.258 1.258 44 H 0.176 0.824 45 H 0.418 0.582 46 H 0.090 0.910 47 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.822 7.039 3.900 8.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.452 6.452 8 N -0.359 5.359 9 C 0.040 3.960 10 H 0.144 0.856 11 C -0.206 4.206 12 C 0.024 3.976 13 H 0.143 0.857 14 N -0.372 5.372 15 C 0.380 3.620 16 O -0.396 6.396 17 C -0.172 4.172 18 C -0.100 4.100 19 C -0.216 4.216 20 C -0.151 4.151 21 O -0.336 6.336 22 Si 0.583 3.417 23 C -0.100 4.100 24 N -0.132 5.132 25 C -0.192 4.192 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.241 0.759 36 H 0.109 0.891 37 H 0.103 0.897 38 H 0.229 0.771 39 H 0.169 0.831 40 H 0.133 0.867 41 H 0.222 0.778 42 H -0.185 1.185 43 H -0.183 1.183 44 H 0.193 0.807 45 H 0.255 0.745 46 H 0.108 0.892 47 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 3.439 5.989 3.184 7.605 hybrid contribution -0.539 0.759 1.103 1.443 sum 2.900 6.748 4.287 8.505 Atomic orbital electron populations 1.22525 0.93804 1.05074 1.02736 1.22127 0.94472 0.91547 0.81841 1.21878 1.02313 0.92350 1.03355 1.22523 1.01595 1.03480 0.96543 1.86303 1.71491 1.23425 1.46792 1.18157 0.78628 0.80580 0.82235 1.90930 1.40829 1.70497 1.42978 1.44650 1.55436 1.11978 1.23830 1.22312 0.99361 0.77737 0.96623 0.85624 1.24081 0.99346 0.97158 1.00028 1.22265 0.90694 0.94235 0.90449 0.85725 1.45774 1.39519 1.08242 1.43695 1.17078 0.81627 0.81773 0.81542 1.90891 1.50548 1.58342 1.39773 1.20401 1.01999 0.92928 1.01884 1.21240 0.96419 0.94222 0.98132 1.19861 1.03573 0.94669 1.03512 1.24332 0.96753 0.88511 1.05490 1.86609 1.56256 1.41777 1.48946 0.95482 0.82184 0.84898 0.79116 1.21876 0.97488 0.89695 1.00947 1.41910 1.29164 1.10069 1.32029 1.23798 1.03137 0.95737 0.96505 0.92127 0.90889 0.89411 0.91411 0.89897 0.91411 0.89397 0.90898 0.92133 0.75897 0.89118 0.89740 0.77143 0.83144 0.86662 0.77836 1.18532 1.18288 0.80689 0.74490 0.89168 0.88832 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 2 C 0.14 0.14 1.13 -90.62 -0.10 0.03 16 3 C -0.14 0.15 8.85 37.15 0.33 0.48 16 4 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 5 O -0.37 -0.68 9.94 -40.32 -0.40 -1.08 16 6 C 0.65 1.41 8.06 54.05 0.44 1.84 16 7 O -0.56 -2.65 11.48 -19.29 -0.22 -2.88 16 8 N -0.70 0.83 5.36 -57.85 -0.31 0.52 16 9 C 0.14 -0.27 4.24 -67.03 -0.28 -0.55 16 10 H 0.13 -0.04 7.46 -51.93 -0.39 -0.43 16 11 C -0.17 0.28 7.69 -25.83 -0.20 0.08 16 12 C 0.13 -0.26 4.21 -67.12 -0.28 -0.54 16 13 H 0.12 -0.02 7.50 -51.93 -0.39 -0.41 16 14 N -0.72 1.61 5.36 -54.32 -0.29 1.32 16 15 C 0.59 0.92 7.79 -12.85 -0.10 0.82 16 16 O -0.52 -3.06 16.50 5.19 0.09 -2.97 16 17 C -0.06 -0.03 7.06 -81.98 -0.58 -0.60 16 18 C -0.07 -0.13 10.59 -39.12 -0.41 -0.55 16 19 C -0.21 0.05 5.44 -105.02 -0.57 -0.52 16 20 C -0.04 0.01 3.02 36.01 0.11 0.12 16 21 O -0.53 -0.90 12.88 -35.23 -0.45 -1.35 16 22 Si 0.68 -1.28 30.59 -169.99 -5.20 -6.48 16 23 C 0.04 -0.10 10.45 -16.91 -0.18 -0.27 16 24 N -0.54 1.69 5.99 -9.39 -0.06 1.64 16 25 C -0.15 0.62 7.58 -25.91 -0.20 0.42 16 26 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.41 -1.42 8.84 -40.82 -0.36 -1.78 16 36 H 0.09 -0.21 8.14 -51.92 -0.42 -0.63 16 37 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 38 H 0.39 -2.15 7.84 -40.82 -0.32 -2.47 16 39 H 0.15 0.45 8.06 -52.48 -0.42 0.02 16 40 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 41 H 0.37 -0.46 8.70 45.56 0.40 -0.07 16 42 H -0.26 0.07 7.11 56.52 0.40 0.47 16 43 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 44 H 0.18 -0.98 6.19 -52.49 -0.32 -1.30 16 45 H 0.42 -2.79 8.19 -40.82 -0.33 -3.12 16 46 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 47 H 0.09 -0.55 8.09 -51.93 -0.42 -0.97 16 LS Contribution 387.16 15.07 5.83 5.83 Total: 0.00 -10.78 387.16 -9.43 -20.21 By element: Atomic # 1 Polarization: -8.72 SS G_CDS: -7.01 Total: -15.74 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -1.41 Total: 0.97 kcal Atomic # 7 Polarization: 4.13 SS G_CDS: -0.66 Total: 3.48 kcal Atomic # 8 Polarization: -7.29 SS G_CDS: -0.99 Total: -8.28 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.20 Total: -6.48 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -10.78 -9.43 -20.21 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_10543058.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.820 kcal (2) G-P(sol) polarization free energy of solvation -10.776 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.596 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.210 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds