Wall clock time and date at job start Sun Mar 7 2021 00:25:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.35537 * 125.67732 * 2 1 4 4 C 1.35455 * 108.87501 * 180.30167 * 3 2 1 5 5 C 1.50697 * 126.07052 * 179.69377 * 4 3 2 6 6 O 1.42902 * 109.47405 * 245.04446 * 5 4 3 7 7 Si 1.86294 * 109.47234 * 5.05113 * 5 4 3 8 8 C 1.39845 * 107.85980 * 359.73886 * 4 3 2 9 9 C 1.37650 * 125.68299 * 179.84776 * 2 1 3 10 10 C 1.46681 * 126.22818 * 359.96358 * 9 2 1 11 11 O 1.21687 * 120.00244 * 4.49196 * 10 9 2 12 12 N 1.34782 * 119.99780 * 184.48724 * 10 9 2 13 13 C 1.46502 * 119.99786 * 174.47983 * 12 10 9 14 14 H 1.09000 * 112.90520 * 336.25221 * 13 12 10 15 15 C 1.53951 * 113.66360 * 107.55245 * 13 12 10 16 16 C 1.53783 * 87.11171 * 139.89046 * 15 13 12 17 17 H 1.08993 * 113.61605 * 89.17987 * 16 15 13 18 18 N 1.46503 * 113.69045 * 220.07842 * 16 15 13 19 19 C 1.34773 * 119.99851 * 252.52981 * 18 16 15 20 20 O 1.21512 * 120.00072 * 0.02562 * 19 18 16 21 21 O 1.34639 * 119.99774 * 180.02562 * 19 18 16 22 22 C 1.45198 * 116.99827 * 180.02562 * 21 19 18 23 23 C 1.53004 * 109.47286 * 59.99831 * 22 21 19 24 24 C 1.52995 * 109.47017 * 180.02562 * 22 21 19 25 25 C 1.52998 * 109.47094 * 300.00199 * 22 21 19 26 26 C 1.53782 * 87.07947 * 334.63558 * 16 15 13 27 27 H 1.09001 * 109.46860 * 272.13308 * 1 2 3 28 28 H 1.08996 * 109.47330 * 32.13055 * 1 2 3 29 29 H 1.08998 * 109.47090 * 152.13514 * 1 2 3 30 30 H 1.08000 * 125.56565 * 0.08345 * 3 2 1 31 31 H 1.09004 * 109.46668 * 125.04925 * 5 4 3 32 32 H 0.96700 * 113.99631 * 179.97438 * 6 5 4 33 33 H 1.48493 * 110.00338 * 178.67879 * 7 5 4 34 34 H 1.48506 * 109.99879 * 299.99507 * 7 5 4 35 35 H 1.08001 * 126.45572 * 179.97438 * 8 4 3 36 36 H 0.96996 * 119.99893 * 354.47711 * 12 10 9 37 37 H 1.08998 * 113.54296 * 25.33815 * 15 13 12 38 38 H 1.08998 * 113.66549 * 254.45434 * 15 13 12 39 39 H 0.96994 * 119.99761 * 72.53669 * 18 16 15 40 40 H 1.09002 * 109.46519 * 60.00189 * 23 22 21 41 41 H 1.09000 * 109.46871 * 179.97438 * 23 22 21 42 42 H 1.08997 * 109.46868 * 300.00203 * 23 22 21 43 43 H 1.08997 * 109.47503 * 60.00030 * 24 22 21 44 44 H 1.09005 * 109.47070 * 179.97438 * 24 22 21 45 45 H 1.09000 * 109.47005 * 299.99657 * 24 22 21 46 46 H 1.08997 * 109.47398 * 59.99590 * 25 22 21 47 47 H 1.09000 * 109.47565 * 180.02562 * 25 22 21 48 48 H 1.09011 * 109.47149 * 299.99829 * 25 22 21 49 49 H 1.09000 * 113.61701 * 139.97644 * 26 16 15 50 50 H 1.09003 * 113.61724 * 270.80244 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7094 -0.0067 5 6 4.7536 1.6190 -0.0156 6 8 5.4694 1.4509 -1.2409 7 14 4.1936 3.3891 0.1387 8 6 3.5780 -0.6888 -0.0051 9 6 2.2679 -1.1181 0.0030 10 6 1.8124 -2.5124 0.0074 11 8 0.6248 -2.7648 -0.0737 12 7 2.7094 -3.5140 0.1013 13 6 2.2499 -4.8993 0.2277 14 1 1.2434 -4.9766 0.6387 15 6 2.4627 -5.7394 -1.0448 16 6 2.8737 -6.8962 -0.1186 17 1 2.0381 -7.5204 0.1977 18 7 4.0089 -7.6757 -0.6187 19 6 3.8124 -8.9185 -1.1014 20 8 2.6936 -9.3924 -1.1224 21 8 4.8557 -9.6351 -1.5605 22 6 4.5698 -10.9658 -2.0663 23 6 3.5915 -10.8667 -3.2385 24 6 5.8687 -11.6215 -2.5393 25 6 3.9480 -11.8117 -0.9533 26 6 3.2681 -5.8259 0.9129 27 1 -0.3633 0.0383 1.0270 28 1 -0.3634 0.8702 -0.5465 29 1 -0.3633 -0.9085 -0.4803 30 1 1.9081 2.1236 0.0013 31 1 5.4044 1.3694 0.8225 32 1 6.2568 2.0072 -1.3160 33 1 5.3707 4.2940 0.1632 34 1 3.3056 3.7418 -0.9982 35 1 4.4583 -1.3144 -0.0096 36 1 3.6592 -3.3175 0.0852 37 1 3.2737 -5.3760 -1.6759 38 1 1.5452 -5.9306 -1.6013 39 1 4.9018 -7.2973 -0.6022 40 1 4.0345 -10.2641 -4.0314 41 1 3.3773 -11.8657 -3.6184 42 1 2.6663 -10.3997 -2.9010 43 1 6.5653 -11.6922 -1.7040 44 1 5.6541 -12.6207 -2.9186 45 1 6.3120 -11.0191 -3.3321 46 1 3.0228 -11.3447 -0.6158 47 1 3.7338 -12.8108 -1.3327 48 1 4.6450 -11.8824 -0.1181 49 1 3.0008 -6.0869 1.9369 50 1 4.2998 -5.4871 0.8180 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_10803934.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:25:23 Heat of formation + Delta-G solvation = -66.843566 kcal Electronic energy + Delta-G solvation = -31051.252529 eV Core-core repulsion = 26661.332481 eV Total energy + Delta-G solvation = -4389.920048 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.52612 -41.81084 -40.85481 -39.36867 -37.85145 -37.71322 -35.52387 -34.94643 -34.04518 -33.33227 -30.82530 -28.40436 -28.31052 -28.26683 -26.91899 -26.26036 -25.52333 -23.90822 -22.62291 -21.59028 -21.03350 -20.91497 -20.21799 -19.08176 -18.60585 -18.38475 -18.02726 -17.20846 -17.05789 -16.98871 -16.63651 -16.22033 -15.97234 -15.64444 -15.41652 -15.37426 -15.20694 -15.00115 -14.79495 -14.40424 -14.31246 -13.99985 -13.91287 -13.69483 -13.58028 -13.40972 -13.25434 -13.16589 -13.10476 -12.84602 -12.80805 -12.55655 -12.49232 -12.45739 -12.34595 -12.17180 -12.01332 -11.88838 -11.27730 -10.98540 -10.94196 -10.37819 -10.27223 -10.05374 -9.66152 -9.22777 -4.96466 0.45892 1.17490 1.30436 1.53675 1.56676 1.63982 1.88863 1.97877 2.31205 2.35567 3.12946 3.26838 3.38361 3.47356 3.69927 3.72855 3.77554 3.79938 3.85317 3.89108 3.93921 3.99149 4.11193 4.28888 4.37451 4.42606 4.47544 4.48093 4.57170 4.58004 4.64898 4.66398 4.69631 4.71435 4.78582 4.80027 4.87167 4.93064 4.95200 4.97929 5.10282 5.20577 5.27836 5.38714 5.41405 5.49451 5.61671 5.68246 5.92945 6.13848 6.40406 6.44759 6.52584 7.15603 7.44049 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.403 5.403 3 C 0.031 3.969 4 C -0.162 4.162 5 C -0.038 4.038 6 O -0.537 6.537 7 Si 0.677 3.323 8 C -0.111 4.111 9 C -0.056 4.056 10 C 0.594 3.406 11 O -0.544 6.544 12 N -0.708 5.708 13 C 0.131 3.869 14 H 0.123 0.877 15 C -0.166 4.166 16 C 0.144 3.856 17 H 0.125 0.875 18 N -0.700 5.700 19 C 0.651 3.349 20 O -0.565 6.565 21 O -0.365 6.365 22 C 0.137 3.863 23 C -0.184 4.184 24 C -0.142 4.142 25 C -0.184 4.184 26 C -0.152 4.152 27 H 0.080 0.920 28 H 0.085 0.915 29 H 0.108 0.892 30 H 0.173 0.827 31 H 0.072 0.928 32 H 0.377 0.623 33 H -0.262 1.262 34 H -0.256 1.256 35 H 0.144 0.856 36 H 0.405 0.595 37 H 0.092 0.908 38 H 0.082 0.918 39 H 0.407 0.593 40 H 0.060 0.940 41 H 0.072 0.928 42 H 0.087 0.913 43 H 0.067 0.933 44 H 0.082 0.918 45 H 0.067 0.933 46 H 0.087 0.913 47 H 0.072 0.928 48 H 0.060 0.940 49 H 0.089 0.911 50 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.416 2.015 3.296 5.157 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.075 5.075 3 C -0.106 4.106 4 C -0.168 4.168 5 C -0.148 4.148 6 O -0.344 6.344 7 Si 0.578 3.422 8 C -0.138 4.138 9 C -0.169 4.169 10 C 0.383 3.617 11 O -0.423 6.423 12 N -0.359 5.359 13 C 0.026 3.974 14 H 0.141 0.859 15 C -0.207 4.207 16 C 0.039 3.961 17 H 0.143 0.857 18 N -0.359 5.359 19 C 0.404 3.596 20 O -0.454 6.454 21 O -0.280 6.280 22 C 0.100 3.900 23 C -0.241 4.241 24 C -0.199 4.199 25 C -0.241 4.241 26 C -0.191 4.191 27 H 0.098 0.902 28 H 0.104 0.896 29 H 0.126 0.874 30 H 0.190 0.810 31 H 0.090 0.910 32 H 0.224 0.776 33 H -0.187 1.187 34 H -0.180 1.180 35 H 0.162 0.838 36 H 0.240 0.760 37 H 0.110 0.890 38 H 0.101 0.899 39 H 0.242 0.758 40 H 0.079 0.921 41 H 0.091 0.909 42 H 0.106 0.894 43 H 0.086 0.914 44 H 0.101 0.899 45 H 0.086 0.914 46 H 0.106 0.894 47 H 0.091 0.909 48 H 0.079 0.921 49 H 0.108 0.892 50 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 1.112 1.827 2.735 3.472 hybrid contribution 1.958 0.193 -0.774 2.114 sum 3.069 2.020 1.961 4.165 Atomic orbital electron populations 1.22408 0.75424 1.05935 1.04259 1.43776 1.07041 1.04616 1.52094 1.21805 0.89992 0.91752 1.07028 1.18584 0.92128 0.93821 1.12301 1.24002 0.93740 1.08609 0.88475 1.86614 1.43095 1.66329 1.38362 0.95360 0.83682 0.74329 0.88808 1.21157 0.94270 0.94586 1.03747 1.19968 0.90236 0.87590 1.19074 1.16978 0.85574 0.83510 0.75643 1.90795 1.16283 1.84772 1.50461 1.45523 1.09743 1.05668 1.74925 1.22265 0.99672 0.78684 0.96791 0.85895 1.24086 1.03285 0.95410 0.97879 1.22280 0.89229 0.90114 0.94452 0.85705 1.44662 1.11952 1.13398 1.65842 1.18155 0.82989 0.81664 0.76773 1.90922 1.23644 1.70615 1.60182 1.86306 1.36952 1.30055 1.74683 1.22118 0.96539 0.77474 0.93857 1.22523 1.01028 1.03432 0.97152 1.21878 0.95345 1.00530 1.02149 1.22525 1.03065 1.00379 0.98156 1.23806 1.00407 0.94954 0.99972 0.90153 0.89626 0.87361 0.80964 0.90956 0.77591 1.18678 1.18003 0.83800 0.75984 0.88996 0.89892 0.75812 0.92140 0.90933 0.89400 0.91399 0.89932 0.91409 0.89408 0.90933 0.92121 0.89198 0.88609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.03 10.69 59.84 0.64 0.61 16 2 N -0.40 -0.58 3.16 -120.24 -0.38 -0.96 16 3 C 0.03 0.02 9.94 -16.91 -0.17 -0.15 16 4 C -0.16 -0.18 5.46 -105.02 -0.57 -0.76 16 5 C -0.04 0.01 3.01 36.00 0.11 0.12 16 6 O -0.54 -0.59 12.86 -35.23 -0.45 -1.04 16 7 Si 0.68 -0.88 30.60 -169.99 -5.20 -6.09 16 8 C -0.11 -0.12 10.29 -39.12 -0.40 -0.52 16 9 C -0.06 -0.11 6.89 -81.98 -0.56 -0.68 16 10 C 0.59 1.37 7.77 -12.85 -0.10 1.27 16 11 O -0.54 -2.78 14.25 5.20 0.07 -2.71 16 12 N -0.71 0.63 5.34 -54.23 -0.29 0.34 16 13 C 0.13 -0.18 4.21 -67.03 -0.28 -0.46 16 14 H 0.12 0.00 7.54 -51.93 -0.39 -0.39 16 15 C -0.17 0.15 7.69 -25.83 -0.20 -0.05 16 16 C 0.14 -0.18 4.24 -67.11 -0.28 -0.46 16 17 H 0.13 0.01 7.46 -51.93 -0.39 -0.38 16 18 N -0.70 0.36 5.36 -57.93 -0.31 0.05 16 19 C 0.65 1.75 8.06 54.05 0.44 2.19 16 20 O -0.56 -2.89 11.48 -19.28 -0.22 -3.11 16 21 O -0.37 -0.88 9.94 -40.32 -0.40 -1.28 16 22 C 0.14 0.20 1.13 -90.62 -0.10 0.09 16 23 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 24 C -0.14 0.09 8.85 37.15 0.33 0.41 16 25 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 26 C -0.15 0.51 7.58 -25.92 -0.20 0.31 16 27 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.11 0.15 6.12 -51.93 -0.32 -0.17 16 30 H 0.17 -0.36 6.21 -52.49 -0.33 -0.69 16 31 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 32 H 0.38 -1.08 8.74 45.56 0.40 -0.68 16 33 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 34 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 35 H 0.14 -0.16 7.45 -52.49 -0.39 -0.55 16 36 H 0.40 -1.27 7.63 -40.82 -0.31 -1.58 16 37 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 39 H 0.41 -1.09 8.84 -40.82 -0.36 -1.45 16 40 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 41 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 42 H 0.09 0.33 5.88 -51.93 -0.31 0.02 16 43 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 45 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 47 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 48 H 0.06 0.06 8.14 -51.92 -0.42 -0.36 16 49 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 50 H 0.10 -0.46 8.09 -51.93 -0.42 -0.88 16 LS Contribution 405.26 15.07 6.11 6.11 Total: 0.00 -10.11 405.26 -9.62 -19.72 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -7.80 Total: -13.04 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: -0.74 Total: 2.01 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -0.98 Total: -0.58 kcal Atomic # 8 Polarization: -7.14 SS G_CDS: -1.00 Total: -8.14 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.20 Total: -6.09 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -10.11 -9.62 -19.72 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_10803934.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.119 kcal (2) G-P(sol) polarization free energy of solvation -10.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.617 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.725 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds