Wall clock time and date at job start Sun Mar 7 2021 00:25:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37655 * 125.67832 * 2 1 4 4 C 1.46686 * 126.22950 * 0.02562 * 3 2 1 5 5 O 1.21696 * 120.00134 * 354.41406 * 4 3 2 6 6 N 1.34774 * 119.99563 * 174.41304 * 4 3 2 7 7 C 1.46497 * 119.99779 * 185.24476 * 6 4 3 8 8 H 1.09008 * 112.90858 * 28.09973 * 7 6 4 9 9 C 1.53776 * 113.61624 * 159.35043 * 7 6 4 10 10 C 1.53782 * 87.08274 * 89.11745 * 9 7 6 11 11 H 1.09001 * 113.61850 * 140.06819 * 10 9 7 12 12 N 1.46504 * 113.61600 * 270.88832 * 10 9 7 13 13 C 1.34771 * 119.99670 * 272.28780 * 12 10 9 14 14 O 1.21513 * 120.00221 * 359.97438 * 13 12 10 15 15 O 1.34642 * 120.00129 * 180.02562 * 13 12 10 16 16 C 1.45199 * 117.00214 * 179.97438 * 15 13 12 17 17 C 1.53000 * 109.47089 * 59.99624 * 16 15 13 18 18 C 1.53001 * 109.46974 * 299.99723 * 16 15 13 19 19 C 1.53004 * 109.47138 * 179.97438 * 16 15 13 20 20 C 1.53780 * 87.08095 * 25.43313 * 10 9 7 21 21 C 1.37861 * 107.53353 * 180.28187 * 3 2 1 22 22 C 1.39837 * 107.08812 * 359.58734 * 21 3 2 23 23 C 1.35447 * 107.86211 * 0.41106 * 22 21 3 24 24 C 1.50700 * 125.56438 * 179.72204 * 23 22 21 25 25 O 1.42906 * 109.47046 * 210.03212 * 24 23 22 26 26 Si 1.86303 * 109.47177 * 330.02674 * 24 23 22 27 27 H 1.08997 * 109.46943 * 94.20699 * 1 2 3 28 28 H 1.09001 * 109.47116 * 214.20017 * 1 2 3 29 29 H 1.08996 * 109.47515 * 334.20130 * 1 2 3 30 30 H 0.96994 * 120.00504 * 5.24567 * 6 4 3 31 31 H 1.09000 * 113.61765 * 334.56945 * 9 7 6 32 32 H 1.08998 * 113.61645 * 203.66159 * 9 7 6 33 33 H 0.96995 * 120.00166 * 92.27527 * 12 10 9 34 34 H 1.08999 * 109.47335 * 300.00292 * 17 16 15 35 35 H 1.09003 * 109.47230 * 60.00049 * 17 16 15 36 36 H 1.09005 * 109.47002 * 179.97438 * 17 16 15 37 37 H 1.09005 * 109.46796 * 180.02562 * 18 16 15 38 38 H 1.08998 * 109.47393 * 300.00004 * 18 16 15 39 39 H 1.08999 * 109.46933 * 60.00025 * 18 16 15 40 40 H 1.08997 * 109.46997 * 300.00309 * 19 16 15 41 41 H 1.09002 * 109.47061 * 59.99692 * 19 16 15 42 42 H 1.08995 * 109.46909 * 179.97438 * 19 16 15 43 43 H 1.08999 * 113.61507 * 89.11437 * 20 10 9 44 44 H 1.09004 * 113.61834 * 220.01977 * 20 10 9 45 45 H 1.08006 * 126.45873 * 179.73773 * 21 3 2 46 46 H 1.08001 * 126.06843 * 180.16315 * 22 21 3 47 47 H 1.08999 * 109.47145 * 90.03140 * 24 23 22 48 48 H 0.96702 * 113.99768 * 180.02562 * 25 24 23 49 49 H 1.48495 * 109.99965 * 300.00256 * 26 24 23 50 50 H 1.48508 * 109.99566 * 61.31892 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8123 2.5125 0.0005 5 8 0.6263 2.7652 -0.1016 6 7 2.7073 3.5137 0.1141 7 6 2.2457 4.8992 0.2303 8 1 1.2603 4.9810 0.6892 9 6 3.2906 5.8474 0.8417 10 6 3.8008 6.0815 -0.5900 11 1 4.0723 7.1174 -0.7929 12 7 4.8339 5.1303 -1.0077 13 6 6.1310 5.3872 -0.7475 14 8 6.4438 6.4078 -0.1669 15 8 7.0806 4.5134 -1.1318 16 6 8.4566 4.8552 -0.8188 17 6 8.6154 4.9949 0.6965 18 6 8.8192 6.1795 -1.4939 19 6 9.3851 3.7512 -1.3289 20 6 2.3886 5.7073 -1.0703 21 6 3.5779 0.6889 -0.0065 22 6 3.5521 -0.7093 -0.0007 23 6 2.2555 -1.1009 -0.0004 24 6 1.7709 -2.5279 -0.0009 25 8 0.5129 -2.6035 -0.6747 26 14 3.0116 -3.6047 -0.8796 27 1 -0.3633 -0.0754 -1.0249 28 1 -0.3633 -0.8500 0.5776 29 1 -0.3634 0.9252 0.4472 30 1 3.6571 3.3170 0.1189 31 1 4.0123 5.3450 1.4858 32 1 2.8578 6.7358 1.3016 33 1 4.5842 4.3158 -1.4713 34 1 7.9539 5.7812 1.0602 35 1 8.3571 4.0514 1.1774 36 1 9.6486 5.2511 0.9314 37 1 9.8524 6.4359 -1.2593 38 1 8.7061 6.0801 -2.5734 39 1 8.1577 6.9658 -1.1301 40 1 9.1265 2.8080 -0.8477 41 1 9.2720 3.6513 -2.4084 42 1 10.4180 4.0081 -1.0944 43 1 1.7093 6.5573 -1.1330 44 1 2.3821 5.0917 -1.9698 45 1 4.4583 1.3145 -0.0122 46 1 4.4132 -1.3611 -0.0010 47 1 1.6540 -2.8723 1.0266 48 1 0.1402 -3.4949 -0.7128 49 1 3.1799 -3.1454 -2.2816 50 1 4.3156 -3.5597 -0.1703 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_10803936.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:25:26 Heat of formation + Delta-G solvation = -61.987670 kcal Electronic energy + Delta-G solvation = -32665.042551 eV Core-core repulsion = 28275.333070 eV Total energy + Delta-G solvation = -4389.709481 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.62341 -41.99354 -41.00038 -39.37523 -37.82619 -37.71646 -35.35310 -34.86237 -33.89656 -33.37505 -31.42490 -28.34478 -28.30615 -27.50083 -27.25123 -26.95147 -25.63417 -23.74032 -22.85259 -21.56539 -21.19304 -20.70983 -20.17951 -19.20047 -18.73524 -18.42198 -17.64619 -17.34508 -17.07135 -16.94885 -16.72882 -16.33933 -16.12105 -15.82655 -15.52536 -15.30287 -15.21009 -15.05199 -14.82503 -14.45151 -14.39971 -13.86214 -13.73321 -13.65627 -13.61361 -13.42803 -13.24948 -13.15110 -13.10492 -12.94517 -12.86724 -12.84598 -12.75262 -12.52311 -12.26356 -12.08234 -11.94724 -11.55798 -11.31558 -11.03229 -10.99598 -10.68196 -10.34131 -10.14036 -9.76880 -9.10700 -5.06604 0.38169 1.07026 1.11126 1.49518 1.63106 1.70519 1.83350 2.00952 2.30518 2.33329 3.04893 3.05581 3.21015 3.41837 3.60027 3.65427 3.74736 3.75733 3.81348 3.95199 3.95939 3.97960 4.23838 4.31295 4.46423 4.47931 4.52107 4.53515 4.54814 4.56514 4.61490 4.68878 4.72969 4.76674 4.81599 4.83154 4.84459 4.88758 4.91363 4.92656 5.06669 5.07884 5.18745 5.34709 5.39416 5.48619 5.56205 5.67253 5.96261 6.12344 6.32400 6.37981 6.41314 7.11331 7.37417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.075 3.925 2 N -0.385 5.385 3 C -0.054 4.054 4 C 0.595 3.405 5 O -0.539 6.539 6 N -0.705 5.705 7 C 0.122 3.878 8 H 0.109 0.891 9 C -0.155 4.155 10 C 0.137 3.863 11 H 0.104 0.896 12 N -0.700 5.700 13 C 0.651 3.349 14 O -0.559 6.559 15 O -0.365 6.365 16 C 0.138 3.862 17 C -0.184 4.184 18 C -0.185 4.185 19 C -0.142 4.142 20 C -0.153 4.153 21 C -0.134 4.134 22 C -0.211 4.211 23 C 0.063 3.937 24 C -0.054 4.054 25 O -0.551 6.551 26 Si 0.716 3.284 27 H 0.079 0.921 28 H 0.088 0.912 29 H 0.097 0.903 30 H 0.402 0.598 31 H 0.080 0.920 32 H 0.112 0.888 33 H 0.404 0.596 34 H 0.087 0.913 35 H 0.060 0.940 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.060 0.940 39 H 0.087 0.913 40 H 0.067 0.933 41 H 0.067 0.933 42 H 0.082 0.918 43 H 0.114 0.886 44 H 0.081 0.919 45 H 0.146 0.854 46 H 0.145 0.855 47 H 0.081 0.919 48 H 0.388 0.612 49 H -0.253 1.253 50 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.545 -4.817 0.402 4.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 N -0.057 5.057 3 C -0.168 4.168 4 C 0.383 3.617 5 O -0.417 6.417 6 N -0.358 5.358 7 C 0.017 3.983 8 H 0.127 0.873 9 C -0.194 4.194 10 C 0.033 3.967 11 H 0.122 0.878 12 N -0.361 5.361 13 C 0.405 3.595 14 O -0.448 6.448 15 O -0.280 6.280 16 C 0.101 3.899 17 C -0.242 4.242 18 C -0.242 4.242 19 C -0.200 4.200 20 C -0.192 4.192 21 C -0.160 4.160 22 C -0.235 4.235 23 C -0.056 4.056 24 C -0.163 4.163 25 O -0.358 6.358 26 Si 0.614 3.386 27 H 0.098 0.902 28 H 0.107 0.893 29 H 0.115 0.885 30 H 0.238 0.762 31 H 0.099 0.901 32 H 0.131 0.869 33 H 0.240 0.760 34 H 0.106 0.894 35 H 0.079 0.921 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.079 0.921 39 H 0.106 0.894 40 H 0.086 0.914 41 H 0.086 0.914 42 H 0.101 0.899 43 H 0.133 0.867 44 H 0.100 0.900 45 H 0.164 0.836 46 H 0.163 0.837 47 H 0.099 0.901 48 H 0.237 0.763 49 H -0.177 1.177 50 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 0.390 -3.484 0.156 3.509 hybrid contribution 0.350 0.058 0.102 0.368 sum 0.739 -3.427 0.257 3.515 Atomic orbital electron populations 1.22290 0.75069 1.04803 1.04358 1.43755 1.07290 1.03791 1.50816 1.19982 0.90457 0.87505 1.18878 1.16934 0.85514 0.83369 0.75837 1.90812 1.16241 1.84716 1.49937 1.45420 1.09722 1.05482 1.75148 1.21958 0.99600 0.79834 0.96940 0.87341 1.23801 0.98237 1.00241 0.97120 1.21893 0.86190 0.93414 0.95210 0.87832 1.44559 1.02862 1.25954 1.62682 1.18073 0.81812 0.81791 0.77835 1.90932 1.81344 1.27311 1.45165 1.86309 1.17423 1.48391 1.75842 1.22125 0.75873 0.96073 0.95818 1.22529 1.03936 1.03724 0.93975 1.22528 1.03397 0.97423 1.00830 1.21885 0.98086 0.97663 1.02321 1.23793 0.95102 1.01438 0.98866 1.21227 0.94458 0.94929 1.05382 1.20517 0.94742 0.95536 1.12718 1.20105 0.90463 0.87295 1.07747 1.24531 0.94569 0.95519 1.01723 1.86458 1.35096 1.35108 1.79115 0.95453 0.77615 0.85876 0.79626 0.90241 0.89328 0.88450 0.76214 0.90120 0.86938 0.75974 0.89395 0.92100 0.90900 0.90899 0.92106 0.89401 0.91362 0.91384 0.89903 0.86743 0.90008 0.83646 0.83742 0.90128 0.76347 1.17686 1.17766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.18 9.27 59.85 0.56 0.73 16 2 N -0.38 -1.38 3.16 -115.62 -0.37 -1.75 16 3 C -0.05 -0.18 6.88 -81.98 -0.56 -0.75 16 4 C 0.59 1.95 7.77 -12.85 -0.10 1.85 16 5 O -0.54 -3.19 14.36 5.19 0.07 -3.12 16 6 N -0.71 -0.17 4.89 -54.32 -0.27 -0.43 16 7 C 0.12 -0.07 4.23 -67.12 -0.28 -0.36 16 8 H 0.11 0.05 7.65 -51.92 -0.40 -0.35 16 9 C -0.15 0.22 7.61 -25.92 -0.20 0.02 16 10 C 0.14 -0.14 4.03 -67.12 -0.27 -0.41 16 11 H 0.10 -0.03 7.98 -51.93 -0.41 -0.45 16 12 N -0.70 0.21 4.42 -57.93 -0.26 -0.04 16 13 C 0.65 1.47 8.06 54.05 0.44 1.90 16 14 O -0.56 -2.52 11.78 -19.28 -0.23 -2.74 16 15 O -0.36 -0.70 9.94 -40.33 -0.40 -1.11 16 16 C 0.14 0.14 1.13 -90.62 -0.10 0.04 16 17 C -0.18 -0.18 8.37 37.16 0.31 0.13 16 18 C -0.18 -0.23 8.37 37.16 0.31 0.09 16 19 C -0.14 0.12 8.85 37.16 0.33 0.45 16 20 C -0.15 0.27 7.57 -25.92 -0.20 0.07 16 21 C -0.13 -0.27 10.35 -39.12 -0.41 -0.67 16 22 C -0.21 -0.52 9.37 -39.98 -0.37 -0.89 16 23 C 0.06 0.17 6.18 -81.95 -0.51 -0.34 16 24 C -0.05 0.04 2.89 36.01 0.10 0.14 16 25 O -0.55 0.67 10.46 -35.23 -0.37 0.30 16 26 Si 0.72 -1.30 31.22 -169.99 -5.31 -6.60 16 27 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 28 H 0.09 0.08 7.08 -51.93 -0.37 -0.29 16 29 H 0.10 0.32 6.21 -51.93 -0.32 -0.01 16 30 H 0.40 -0.42 6.10 -40.82 -0.25 -0.67 16 31 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 32 H 0.11 -0.29 8.14 -51.93 -0.42 -0.72 16 33 H 0.40 -0.59 7.82 -40.82 -0.32 -0.91 16 34 H 0.09 0.26 5.88 -51.93 -0.31 -0.04 16 35 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 39 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 40 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 43 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 44 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.15 -0.10 7.45 -52.48 -0.39 -0.49 16 46 H 0.15 0.17 6.69 -52.49 -0.35 -0.18 16 47 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 48 H 0.39 -2.44 8.74 45.56 0.40 -2.04 16 49 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 50 H -0.25 -0.08 6.87 56.52 0.39 0.31 16 LS Contribution 398.30 15.07 6.00 6.00 Total: 0.00 -9.42 398.30 -9.79 -19.21 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -7.72 Total: -11.72 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -0.95 Total: 2.00 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.89 Total: -2.23 kcal Atomic # 8 Polarization: -5.74 SS G_CDS: -0.92 Total: -6.66 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.31 Total: -6.60 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -9.42 -9.79 -19.21 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_10803936.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.780 kcal (2) G-P(sol) polarization free energy of solvation -9.417 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.790 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.207 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.988 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds