Wall clock time and date at job start Sun Mar 7 2021 00:25:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53005 * 109.46939 * 2 1 4 4 C 1.52995 * 109.47373 * 240.00058 * 2 1 3 5 5 O 1.45201 * 109.47159 * 119.99860 * 2 1 3 6 6 C 1.34626 * 117.00108 * 60.00650 * 5 2 1 7 7 O 1.21513 * 119.99942 * 359.97438 * 6 5 2 8 8 N 1.34776 * 120.00021 * 180.02562 * 6 5 2 9 9 C 1.46506 * 119.99831 * 179.97438 * 8 6 5 10 10 H 1.08997 * 112.85420 * 23.80069 * 9 8 6 11 11 C 1.53781 * 113.61405 * 154.99784 * 9 8 6 12 12 C 1.53786 * 87.17350 * 140.02258 * 11 9 8 13 13 H 1.08993 * 113.61491 * 89.15923 * 12 11 9 14 14 N 1.46501 * 113.61366 * 220.06429 * 12 11 9 15 15 C 1.34773 * 120.00122 * 204.99908 * 14 12 11 16 16 O 1.21575 * 119.99549 * 359.97438 * 15 14 12 17 17 C 1.47686 * 120.00253 * 179.97438 * 15 14 12 18 18 C 1.39830 * 120.16832 * 179.72154 * 17 15 14 19 19 F 1.35106 * 120.10868 * 0.02562 * 18 17 15 20 20 C 1.38314 * 119.78022 * 179.79375 * 18 17 15 21 21 C 1.38199 * 120.11905 * 0.48294 * 20 18 17 22 22 C 1.38465 * 120.33884 * 359.74818 * 21 20 18 23 23 C 1.50701 * 119.89320 * 179.97438 * 22 21 20 24 24 O 1.42898 * 109.47274 * 245.02309 * 23 22 21 25 25 Si 1.86307 * 109.46968 * 5.02050 * 23 22 21 26 26 C 1.37851 * 120.21788 * 0.02562 * 22 21 20 27 27 C 1.53782 * 113.68817 * 252.53351 * 9 8 6 28 28 H 1.09005 * 109.47550 * 299.99843 * 1 2 3 29 29 H 1.08996 * 109.47695 * 60.00060 * 1 2 3 30 30 H 1.09002 * 109.47152 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47457 * 179.97438 * 3 2 1 32 32 H 1.09004 * 109.47113 * 300.00297 * 3 2 1 33 33 H 1.09005 * 109.46871 * 59.99741 * 3 2 1 34 34 H 1.09002 * 109.46975 * 300.00100 * 4 2 1 35 35 H 1.09004 * 109.46806 * 59.99626 * 4 2 1 36 36 H 1.09005 * 109.47447 * 179.97438 * 4 2 1 37 37 H 0.96990 * 120.00286 * 359.97438 * 8 6 5 38 38 H 1.09002 * 113.61445 * 254.61257 * 11 9 8 39 39 H 1.09002 * 113.61408 * 25.42988 * 11 9 8 40 40 H 0.97002 * 119.99797 * 24.99368 * 14 12 11 41 41 H 1.07997 * 119.94328 * 180.23487 * 20 18 17 42 42 H 1.08000 * 119.83776 * 179.72313 * 21 20 18 43 43 H 1.09000 * 109.47180 * 125.02143 * 23 22 21 44 44 H 0.96697 * 114.00176 * 59.99669 * 24 23 22 45 45 H 1.48493 * 109.99549 * 179.97438 * 25 23 22 46 46 H 1.48500 * 109.99871 * 301.31978 * 25 23 22 47 47 H 1.08001 * 120.06055 * 179.97438 * 26 22 21 48 48 H 1.08997 * 113.61668 * 334.55345 * 27 9 8 49 49 H 1.08998 * 113.61674 * 105.37854 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3383 7 8 0.9510 -2.5094 0.5040 8 7 2.0673 -2.6653 2.4172 9 6 1.6733 -4.0665 2.5836 10 1 1.4210 -4.5503 1.6401 11 6 2.6462 -4.8809 3.4526 12 6 1.4100 -5.5558 4.0700 13 1 1.0856 -6.4474 3.5336 14 7 1.5176 -5.7676 5.5157 15 6 0.8070 -6.7477 6.1079 16 8 0.0762 -7.4557 5.4425 17 6 0.9159 -6.9616 7.5651 18 6 0.1757 -7.9737 8.1840 19 9 -0.6420 -8.7605 7.4508 20 6 0.2871 -8.1698 9.5487 21 6 1.1195 -7.3617 10.2997 22 6 1.8511 -6.3550 9.6927 23 6 2.7553 -5.4793 10.5214 24 8 2.2695 -4.1357 10.4980 25 14 2.7812 -6.0998 12.2779 26 6 1.7542 -6.1502 8.3329 27 6 0.6262 -4.2868 3.6881 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4427 0.0005 32 1 1.6765 1.9564 -0.8900 33 1 1.6765 1.9564 0.8900 34 1 1.6766 -1.7489 -1.2492 35 1 1.6766 -0.2073 -2.1392 36 1 3.1300 -0.7208 -1.2494 37 1 2.6268 -2.2364 3.0834 38 1 3.2761 -5.5627 2.8811 39 1 3.2119 -4.2747 4.1602 40 1 2.1005 -5.2025 6.0465 41 1 -0.2805 -8.9531 10.0288 42 1 1.1997 -7.5160 11.3656 43 1 3.7647 -5.5080 10.1110 44 1 1.3743 -4.0349 10.8494 45 1 3.6699 -5.2450 13.1053 46 1 1.4059 -6.0957 12.8383 47 1 2.3256 -5.3640 7.8621 48 1 0.6385 -3.5185 4.4611 49 1 -0.3750 -4.4876 3.3068 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_12335834.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:25:40 Heat of formation + Delta-G solvation = -133.485913 kcal Electronic energy + Delta-G solvation = -32923.191800 eV Core-core repulsion = 28153.665337 eV Total energy + Delta-G solvation = -4769.526463 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.167 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -49.88466 -41.90217 -41.41979 -40.51891 -39.44358 -37.86002 -37.67971 -35.52383 -34.92281 -33.71425 -32.53825 -32.24746 -28.32212 -28.27768 -26.95408 -26.81057 -26.53278 -25.10367 -23.56044 -22.62281 -21.74003 -21.36895 -20.80215 -19.36450 -19.00794 -18.47725 -18.40845 -17.99468 -17.38097 -17.07519 -17.03710 -16.85593 -16.45249 -16.26034 -16.17951 -15.83451 -15.74088 -15.51901 -15.34237 -15.23934 -14.86018 -14.50543 -14.40235 -14.30455 -13.97383 -13.73248 -13.68185 -13.42369 -13.29374 -13.12261 -12.93908 -12.85949 -12.81916 -12.58790 -12.48748 -12.42281 -12.37941 -12.18732 -12.03861 -11.85512 -11.29143 -11.12101 -10.95647 -10.75731 -10.46380 -10.28442 -10.07443 -9.90202 -5.12874 -0.56090 -0.15133 1.07456 1.16176 1.41671 1.59790 1.80889 1.87279 1.95198 2.41983 2.97189 3.09956 3.12431 3.21904 3.31716 3.34582 3.38879 3.49351 3.69238 3.72899 3.78594 3.82948 3.84119 3.95120 3.97969 4.25929 4.37345 4.41970 4.43903 4.46409 4.56921 4.61515 4.63756 4.65409 4.67229 4.73691 4.78887 4.81293 4.86082 4.90058 4.94124 4.95338 4.99368 5.09009 5.23777 5.37237 5.37673 5.47574 5.49423 5.60153 6.18481 6.29618 6.40562 7.06909 7.42294 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.564 6.564 8 N -0.700 5.700 9 C 0.144 3.856 10 H 0.126 0.874 11 C -0.153 4.153 12 C 0.128 3.872 13 H 0.125 0.875 14 N -0.713 5.713 15 C 0.561 3.439 16 O -0.517 6.517 17 C -0.176 4.176 18 C 0.168 3.832 19 F -0.110 7.110 20 C -0.156 4.156 21 C -0.061 4.061 22 C -0.139 4.139 23 C -0.073 4.073 24 O -0.528 6.528 25 Si 0.686 3.314 26 C -0.030 4.030 27 C -0.166 4.166 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.406 0.594 38 H 0.090 0.910 39 H 0.095 0.905 40 H 0.401 0.599 41 H 0.150 0.850 42 H 0.142 0.858 43 H 0.123 0.877 44 H 0.378 0.622 45 H -0.254 1.254 46 H -0.258 1.258 47 H 0.138 0.862 48 H 0.091 0.909 49 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.742 1.462 4.524 6.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.453 6.453 8 N -0.359 5.359 9 C 0.040 3.960 10 H 0.144 0.856 11 C -0.192 4.192 12 C 0.022 3.978 13 H 0.143 0.857 14 N -0.365 5.365 15 C 0.348 3.652 16 O -0.393 6.393 17 C -0.180 4.180 18 C 0.148 3.852 19 F -0.088 7.088 20 C -0.175 4.175 21 C -0.079 4.079 22 C -0.139 4.139 23 C -0.183 4.183 24 O -0.335 6.335 25 Si 0.587 3.413 26 C -0.049 4.049 27 C -0.207 4.207 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.242 0.758 38 H 0.108 0.892 39 H 0.113 0.887 40 H 0.237 0.763 41 H 0.168 0.832 42 H 0.160 0.840 43 H 0.141 0.859 44 H 0.226 0.774 45 H -0.179 1.179 46 H -0.182 1.182 47 H 0.156 0.844 48 H 0.109 0.891 49 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 4.240 1.025 4.086 5.977 hybrid contribution -0.498 1.235 0.188 1.345 sum 3.742 2.260 4.274 6.114 Atomic orbital electron populations 1.22522 0.93830 1.05086 1.02710 1.22120 0.94455 0.91549 0.81851 1.21882 1.02320 0.92365 1.03340 1.22525 1.01596 1.03470 0.96541 1.86302 1.71490 1.23449 1.46768 1.18152 0.78682 0.80657 0.82096 1.90925 1.40737 1.70380 1.43253 1.44659 1.55555 1.11979 1.23684 1.22274 0.95357 0.79170 0.99229 0.85648 1.23802 0.97187 0.99085 0.99082 1.22300 0.96488 0.98502 0.80468 0.85715 1.45763 1.46997 1.35138 1.08641 1.18001 0.80194 0.80406 0.86648 1.90883 1.37722 1.45830 1.64872 1.20065 1.03271 1.00302 0.94340 1.17766 0.89268 0.89004 0.89210 1.91638 1.68850 1.71388 1.76936 1.21175 1.02082 1.02613 0.91646 1.21156 0.93409 0.93098 1.00224 1.20262 1.00507 0.98573 0.94589 1.25014 0.99244 0.84180 1.09843 1.86615 1.36387 1.25061 1.85412 0.94945 0.82478 0.89600 0.74321 1.21016 0.94765 0.96203 0.92938 1.24086 1.00154 0.97818 0.98611 0.92141 0.90918 0.89398 0.91394 0.89915 0.91419 0.89407 0.90917 0.92112 0.75841 0.89158 0.88692 0.76288 0.83233 0.84041 0.85937 0.77408 1.17866 1.18246 0.84393 0.89053 0.89831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.28 8.37 37.15 0.31 0.03 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.09 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 5 O -0.37 -0.85 9.94 -40.29 -0.40 -1.26 16 6 C 0.65 1.72 8.06 54.05 0.44 2.16 16 7 O -0.56 -2.88 11.48 -19.28 -0.22 -3.10 16 8 N -0.70 0.41 5.36 -57.93 -0.31 0.10 16 9 C 0.14 -0.18 4.24 -67.11 -0.28 -0.47 16 10 H 0.13 0.02 7.46 -51.93 -0.39 -0.37 16 11 C -0.15 0.52 7.58 -25.92 -0.20 0.32 16 12 C 0.13 -0.16 4.25 -67.02 -0.28 -0.45 16 13 H 0.13 0.05 7.46 -51.93 -0.39 -0.34 16 14 N -0.71 0.91 5.31 -53.92 -0.29 0.62 16 15 C 0.56 1.24 7.77 -12.40 -0.10 1.15 16 16 O -0.52 -3.34 14.94 5.30 0.08 -3.26 16 17 C -0.18 -0.11 5.88 -104.91 -0.62 -0.73 16 18 C 0.17 0.26 7.29 -38.96 -0.28 -0.03 16 19 F -0.11 -0.49 15.55 2.25 0.04 -0.46 16 20 C -0.16 0.20 10.01 -39.57 -0.40 -0.19 16 21 C -0.06 0.17 8.66 -39.51 -0.34 -0.17 16 22 C -0.14 0.36 5.35 -104.68 -0.56 -0.20 16 23 C -0.07 0.23 2.80 36.01 0.10 0.33 16 24 O -0.53 0.86 12.83 -35.23 -0.45 0.41 16 25 Si 0.69 -2.25 29.87 -169.99 -5.08 -7.33 16 26 C -0.03 0.06 9.17 -39.19 -0.36 -0.30 16 27 C -0.17 0.17 7.69 -25.82 -0.20 -0.03 16 28 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 29 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 30 H 0.09 0.32 5.88 -51.93 -0.31 0.02 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 35 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.41 -1.14 8.84 -40.82 -0.36 -1.50 16 38 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 39 H 0.09 -0.48 8.09 -51.93 -0.42 -0.90 16 40 H 0.40 -1.61 6.76 -40.82 -0.28 -1.89 16 41 H 0.15 -0.46 8.06 -52.49 -0.42 -0.89 16 42 H 0.14 -0.67 4.82 -52.49 -0.25 -0.92 16 43 H 0.12 -0.51 7.96 -51.93 -0.41 -0.92 16 44 H 0.38 -1.56 8.70 45.56 0.40 -1.17 16 45 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 46 H -0.26 0.37 7.00 56.52 0.40 0.77 16 47 H 0.14 -0.57 6.41 -52.49 -0.34 -0.91 16 48 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 49 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 LS Contribution 402.59 15.07 6.07 6.07 Total: 0.00 -9.97 402.59 -9.70 -19.67 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -6.90 Total: -13.45 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: -2.23 Total: 1.98 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -0.60 Total: 0.72 kcal Atomic # 8 Polarization: -6.21 SS G_CDS: -0.99 Total: -7.21 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.46 kcal Atomic # 14 Polarization: -2.25 SS G_CDS: -5.08 Total: -7.33 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -9.97 -9.70 -19.67 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_12335834.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.815 kcal (2) G-P(sol) polarization free energy of solvation -9.967 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.704 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.671 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.486 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds